RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 RGPD2P0DJD1 1756 aa19.35■□□□□ 0.69
GABBR1-215ENST00000488334 SULT6B1Q6IMI4 303 aa19.35■□□□□ 0.69
GABBR1-215ENST00000488334 LRRC37A3O60309 1634 aa19.34■□□□□ 0.69
GABBR1-215ENST00000488334 PNNQ9H307 717 aaKnown RBP19.34■□□□□ 0.69
GABBR1-215ENST00000488334 BRWD3Q6RI45 1802 aa19.34■□□□□ 0.69
GABBR1-215ENST00000488334 RGPD1P0DJD0 1748 aa19.34■□□□□ 0.69
GABBR1-215ENST00000488334 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.69
GABBR1-215ENST00000488334 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.69
GABBR1-215ENST00000488334 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.68
GABBR1-215ENST00000488334 PLEKHO1Q53GL0 409 aaPredicted RBP19.33■□□□□ 0.68
GABBR1-215ENST00000488334 MEGF6O75095 1541 aa19.33■□□□□ 0.68
GABBR1-215ENST00000488334 SOCS7O14512 581 aa19.32■□□□□ 0.68
GABBR1-215ENST00000488334 FCHSD2O94868 740 aa19.32■□□□□ 0.68
GABBR1-215ENST00000488334 MARCH10Q8NA82 808 aaPredicted RBP19.31■□□□□ 0.68
GABBR1-215ENST00000488334 U2AF1L5P0DN76 240 aaPredicted RBP19.29■□□□□ 0.68
GABBR1-215ENST00000488334 U2AF1Q01081 240 aaKnown RBP eCLIP19.29■□□□□ 0.68
GABBR1-215ENST00000488334 HSP90AB1P08238 724 aaKnown RBP19.28■□□□□ 0.68
GABBR1-215ENST00000488334 AEBP1Q8IUX7 1158 aa19.28■□□□□ 0.68
GABBR1-215ENST00000488334 IFNL2Q8IZJ0 200 aa19.28■□□□□ 0.68
GABBR1-215ENST00000488334 DDX54Q8TDD1 881 aaKnown RBP19.28■□□□□ 0.68
GABBR1-215ENST00000488334 NEFMP07197 916 aa19.27■□□□□ 0.68
GABBR1-215ENST00000488334 HMOX1P09601 288 aa19.27■□□□□ 0.68
GABBR1-215ENST00000488334 SF3B2Q13435 895 aaKnown RBP19.27■□□□□ 0.68
GABBR1-215ENST00000488334 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.68
GABBR1-215ENST00000488334 PKD1L3Q7Z443 1732 aa19.26■□□□□ 0.67
GABBR1-215ENST00000488334 UPF1Q92900 1129 aaKnown RBP eCLIP19.26■□□□□ 0.67
GABBR1-215ENST00000488334 EP400Q96L91 3159 aa19.25■□□□□ 0.67
GABBR1-215ENST00000488334 CYP27B1O15528 508 aa19.24■□□□□ 0.67
GABBR1-215ENST00000488334 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
GABBR1-215ENST00000488334 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
GABBR1-215ENST00000488334 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
GABBR1-215ENST00000488334 BCL11BQ9C0K0 894 aaPredicted RBP19.24■□□□□ 0.67
GABBR1-215ENST00000488334 RSPH6AQ9H0K4 717 aa19.24■□□□□ 0.67
GABBR1-215ENST00000488334 PHKG2P15735 406 aa19.23■□□□□ 0.67
GABBR1-215ENST00000488334 PRKAR2BP31323 418 aa19.22■□□□□ 0.67
GABBR1-215ENST00000488334 AKAP4Q5JQC9 854 aa19.22■□□□□ 0.67
GABBR1-215ENST00000488334 FAM182BQ5T319 152 aa19.22■□□□□ 0.67
GABBR1-215ENST00000488334 ZNF530Q6P9A1 599 aaPredicted RBP19.22■□□□□ 0.67
GABBR1-215ENST00000488334 DCAF5Q96JK2 942 aa19.22■□□□□ 0.67
GABBR1-215ENST00000488334 TRIM37O94972 964 aa19.2■□□□□ 0.66
GABBR1-215ENST00000488334 DIEXFQ68CQ4 756 aaKnown RBP19.2■□□□□ 0.66
GABBR1-215ENST00000488334 SHANK3Q9BYB0 1731 aa19.2■□□□□ 0.66
GABBR1-215ENST00000488334 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
GABBR1-215ENST00000488334 HMGB2P26583 209 aaKnown RBP19.18■□□□□ 0.66
GABBR1-215ENST00000488334 BAG6P46379 1132 aa19.18■□□□□ 0.66
GABBR1-215ENST00000488334 MTHFSDQ2M296 383 aaKnown RBP19.18■□□□□ 0.66
GABBR1-215ENST00000488334 PLSCR1O15162 318 aa19.17■□□□□ 0.66
GABBR1-215ENST00000488334 HTATSF1O43719 755 aaKnown RBP19.17■□□□□ 0.66
GABBR1-215ENST00000488334 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
GABBR1-215ENST00000488334 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
GABBR1-215ENST00000488334 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
GABBR1-215ENST00000488334 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
GABBR1-215ENST00000488334 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
GABBR1-215ENST00000488334 APBA3O96018 575 aa19.15■□□□□ 0.66
GABBR1-215ENST00000488334 PHACTR3Q96KR7 559 aa19.15■□□□□ 0.66
GABBR1-215ENST00000488334 SBF2Q86WG5 1849 aa19.15■□□□□ 0.66
GABBR1-215ENST00000488334 PRIM1P49642 420 aaKnown RBP19.14■□□□□ 0.65
GABBR1-215ENST00000488334 PNISRQ8TF01 805 aaKnown RBP19.14■□□□□ 0.65
GABBR1-215ENST00000488334 RUNDC1Q96C34 613 aa19.14■□□□□ 0.65
GABBR1-215ENST00000488334 ACSBG1Q96GR2 724 aa19.14■□□□□ 0.65
GABBR1-215ENST00000488334 ADAMTS8Q9UP79 889 aa19.14■□□□□ 0.65
GABBR1-215ENST00000488334 NHSQ6T4R5 1651 aa19.14■□□□□ 0.65
GABBR1-215ENST00000488334 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
GABBR1-215ENST00000488334 KAT6BQ8WYB5 2073 aa19.13■□□□□ 0.65
GABBR1-215ENST00000488334 KCNQ2O43526 872 aa19.12■□□□□ 0.65
GABBR1-215ENST00000488334 RTF1Q92541 710 aaKnown RBP19.12■□□□□ 0.65
GABBR1-215ENST00000488334 SYTL4Q96C24 671 aaPredicted RBP19.12■□□□□ 0.65
GABBR1-215ENST00000488334 TMOD3Q9NYL9 352 aa19.12■□□□□ 0.65
GABBR1-215ENST00000488334 SMARCC1Q92922 1105 aaPredicted RBP19.11■□□□□ 0.65
GABBR1-215ENST00000488334 RNMTO43148 476 aaKnown RBP19.1■□□□□ 0.65
GABBR1-215ENST00000488334 CABP4P57796 275 aa19.1■□□□□ 0.65
GABBR1-215ENST00000488334 LMOD3Q0VAK6 560 aa19.1■□□□□ 0.65
GABBR1-215ENST00000488334 NFE2L2Q16236 605 aa19.1■□□□□ 0.65
GABBR1-215ENST00000488334 MPRIPQ6WCQ1 1025 aa19.1■□□□□ 0.65
GABBR1-215ENST00000488334 TNS1Q9HBL0 1735 aaKnown RBP19.09■□□□□ 0.65
GABBR1-215ENST00000488334 CAMKK2Q96RR4 588 aa19.09■□□□□ 0.65
GABBR1-215ENST00000488334 CCDC184Q52MB2 194 aa19.08■□□□□ 0.64
GABBR1-215ENST00000488334 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
GABBR1-215ENST00000488334 PIGBQ92521 554 aa19.08■□□□□ 0.64
GABBR1-215ENST00000488334 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
GABBR1-215ENST00000488334 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.64
GABBR1-215ENST00000488334 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.64
GABBR1-215ENST00000488334 DOT1LQ8TEK3 1739 aa19.08■□□□□ 0.64
GABBR1-215ENST00000488334 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.64
GABBR1-215ENST00000488334 SLC27A3Q5K4L6 730 aa19.07■□□□□ 0.64
GABBR1-215ENST00000488334 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
GABBR1-215ENST00000488334 EN1Q05925 392 aaPredicted RBP19.06■□□□□ 0.64
GABBR1-215ENST00000488334 TEFQ10587 303 aa19.06■□□□□ 0.64
GABBR1-215ENST00000488334 ADAMTS7Q9UKP4 1686 aa19.05■□□□□ 0.64
GABBR1-215ENST00000488334 TMPOP42166 694 aaKnown RBP19.05■□□□□ 0.64
GABBR1-215ENST00000488334 PTF1AQ7RTS3 328 aa19.05■□□□□ 0.64
GABBR1-215ENST00000488334 DEFB132Q7Z7B7 95 aa19.05■□□□□ 0.64
GABBR1-215ENST00000488334 NFATC2IPQ8NCF5 419 aa19.05■□□□□ 0.64
GABBR1-215ENST00000488334 IL17REQ8NFR9 667 aa19.05■□□□□ 0.64
GABBR1-215ENST00000488334 LGR6Q9HBX8 967 aa19.05■□□□□ 0.64
GABBR1-215ENST00000488334 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
GABBR1-215ENST00000488334 RIPK4P57078 832 aa19.04■□□□□ 0.64
GABBR1-215ENST00000488334 NGEFQ8N5V2 710 aa19.04■□□□□ 0.64
GABBR1-215ENST00000488334 BTAF1O14981 1849 aa19.04■□□□□ 0.64
GABBR1-215ENST00000488334 MRC1P22897 1456 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms