RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 SYT17Q9BSW7 474 aa16.71■□□□□ 0.27
COL1A2-210ENST00000488298 IP6K1Q92551 441 aa16.7■□□□□ 0.26
COL1A2-210ENST00000488298 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
COL1A2-210ENST00000488298 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
COL1A2-210ENST00000488298 MAP2P11137 1827 aaKnown RBP16.69■□□□□ 0.26
COL1A2-210ENST00000488298 FBLN1P23142 703 aa16.69■□□□□ 0.26
COL1A2-210ENST00000488298 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
COL1A2-210ENST00000488298 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
COL1A2-210ENST00000488298 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
COL1A2-210ENST00000488298 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
COL1A2-210ENST00000488298 COG3Q96JB2 828 aa16.68■□□□□ 0.26
COL1A2-210ENST00000488298 SGIP1Q9BQI5 828 aa16.68■□□□□ 0.26
COL1A2-210ENST00000488298 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
COL1A2-210ENST00000488298 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
COL1A2-210ENST00000488298 FAM208AQ9UK61 1670 aaKnown RBP16.67■□□□□ 0.26
COL1A2-210ENST00000488298 PANK3Q9H999 370 aa16.67■□□□□ 0.26
COL1A2-210ENST00000488298 NHSQ6T4R5 1651 aa16.66■□□□□ 0.26
COL1A2-210ENST00000488298 ARXQ96QS3 562 aa16.66■□□□□ 0.26
COL1A2-210ENST00000488298 LRRC4BQ9NT99 713 aa16.66■□□□□ 0.26
COL1A2-210ENST00000488298 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
COL1A2-210ENST00000488298 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
COL1A2-210ENST00000488298 AMPHP49418 695 aa16.64■□□□□ 0.25
COL1A2-210ENST00000488298 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
COL1A2-210ENST00000488298 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
COL1A2-210ENST00000488298 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
COL1A2-210ENST00000488298 SYTL4Q96C24 671 aaPredicted RBP16.63■□□□□ 0.25
COL1A2-210ENST00000488298 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
COL1A2-210ENST00000488298 RTL1A6NKG5 1358 aa16.63■□□□□ 0.25
COL1A2-210ENST00000488298 HOXC9P31274 260 aa16.62■□□□□ 0.25
COL1A2-210ENST00000488298 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
COL1A2-210ENST00000488298 SLC16A10Q8TF71 515 aa16.62■□□□□ 0.25
COL1A2-210ENST00000488298 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
COL1A2-210ENST00000488298 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
COL1A2-210ENST00000488298 RRS1Q15050 365 aaKnown RBP16.61■□□□□ 0.25
COL1A2-210ENST00000488298 ZNF784Q8NCA9 323 aaPredicted RBP16.61■□□□□ 0.25
COL1A2-210ENST00000488298 KIF24Q5T7B8 1368 aa16.61■□□□□ 0.25
COL1A2-210ENST00000488298 BTAF1O14981 1849 aa16.61■□□□□ 0.25
COL1A2-210ENST00000488298 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
COL1A2-210ENST00000488298 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
COL1A2-210ENST00000488298 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
COL1A2-210ENST00000488298 NSD2O96028 1365 aa16.59■□□□□ 0.25
COL1A2-210ENST00000488298 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
COL1A2-210ENST00000488298 POLD1P28340 1107 aa16.58■□□□□ 0.24
COL1A2-210ENST00000488298 KCNQ4P56696 695 aa16.58■□□□□ 0.24
COL1A2-210ENST00000488298 INSRP06213 1382 aa16.58■□□□□ 0.24
COL1A2-210ENST00000488298 SMG6Q86US8 1419 aaKnown RBP16.58■□□□□ 0.24
COL1A2-210ENST00000488298 SHANK3Q9BYB0 1731 aa16.58■□□□□ 0.24
COL1A2-210ENST00000488298 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
COL1A2-210ENST00000488298 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
COL1A2-210ENST00000488298 GPR162Q16538 588 aa16.57■□□□□ 0.24
COL1A2-210ENST00000488298 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
COL1A2-210ENST00000488298 EMILIN1Q9Y6C2 1016 aa16.57■□□□□ 0.24
COL1A2-210ENST00000488298 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
COL1A2-210ENST00000488298 FLT4P35916 1363 aa16.56■□□□□ 0.24
COL1A2-210ENST00000488298 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
COL1A2-210ENST00000488298 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
COL1A2-210ENST00000488298 NBPF6Q5VWK0 638 aa16.55■□□□□ 0.24
COL1A2-210ENST00000488298 NBPF4Q96M43 638 aa16.55■□□□□ 0.24
COL1A2-210ENST00000488298 RAPGEF4Q8WZA2 1011 aa16.54■□□□□ 0.24
COL1A2-210ENST00000488298 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
COL1A2-210ENST00000488298 NPC1L1Q9UHC9 1359 aa16.53■□□□□ 0.24
COL1A2-210ENST00000488298 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
COL1A2-210ENST00000488298 MEGF6O75095 1541 aa16.52■□□□□ 0.24
COL1A2-210ENST00000488298 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
COL1A2-210ENST00000488298 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
COL1A2-210ENST00000488298 KNSTRNQ9Y448 316 aa16.52■□□□□ 0.24
COL1A2-210ENST00000488298 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
COL1A2-210ENST00000488298 MYCNP04198 464 aaPredicted RBP16.5■□□□□ 0.23
COL1A2-210ENST00000488298 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
COL1A2-210ENST00000488298 PKD1L3Q7Z443 1732 aa16.49■□□□□ 0.23
COL1A2-210ENST00000488298 COL23A1Q86Y22 540 aaPredicted RBP16.49■□□□□ 0.23
COL1A2-210ENST00000488298 CHD4Q14839 1912 aa16.49■□□□□ 0.23
COL1A2-210ENST00000488298 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
COL1A2-210ENST00000488298 QSER1Q2KHR3 1735 aa16.48■□□□□ 0.23
COL1A2-210ENST00000488298 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
COL1A2-210ENST00000488298 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
COL1A2-210ENST00000488298 C1QTNF8P60827 252 aa16.47■□□□□ 0.23
COL1A2-210ENST00000488298 MORC1Q86VD1 984 aa16.47■□□□□ 0.23
COL1A2-210ENST00000488298 UTRNP46939 3433 aa16.47■□□□□ 0.23
COL1A2-210ENST00000488298 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
COL1A2-210ENST00000488298 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
COL1A2-210ENST00000488298 LY75O60449 1722 aa16.46■□□□□ 0.23
COL1A2-210ENST00000488298 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
COL1A2-210ENST00000488298 EIF4A2Q14240 407 aaKnown RBP16.45■□□□□ 0.22
COL1A2-210ENST00000488298 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
COL1A2-210ENST00000488298 CYP27B1O15528 508 aa16.44■□□□□ 0.22
COL1A2-210ENST00000488298 GRIN3BO60391 1043 aa16.44■□□□□ 0.22
COL1A2-210ENST00000488298 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
COL1A2-210ENST00000488298 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
COL1A2-210ENST00000488298 EYA1Q99502 592 aa16.44■□□□□ 0.22
COL1A2-210ENST00000488298 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
COL1A2-210ENST00000488298 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
COL1A2-210ENST00000488298 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
COL1A2-210ENST00000488298 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
COL1A2-210ENST00000488298 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
COL1A2-210ENST00000488298 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
COL1A2-210ENST00000488298 IGSF1Q8N6C5 1336 aa16.42■□□□□ 0.22
COL1A2-210ENST00000488298 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL1A2-210ENST00000488298 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
COL1A2-210ENST00000488298 TOGARAM1Q9Y4F4 1720 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms