RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 KDM5DQ9BY66 1539 aa9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 ILDR2Q71H61 639 aa9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 WASHC2CQ9Y4E1 1318 aa9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 POLR1AO95602 1720 aaPredicted RBP9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 TNRQ92752 1358 aa9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 LRRC9Q6ZRR7 1453 aa9.98□□□□□ -0.81
TNFSF4-203ENST00000488053 ARHGEF5Q12774 1597 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 UBAP1LF5GYI3 381 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 RTL5Q5HYW3 569 aaPredicted RBP9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 KANK4Q5T7N3 995 aaPredicted RBP9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 IFFO2Q5TF58 517 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 CFAP65Q6ZU64 1925 aaKnown RBP9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 VPS8Q8N3P4 1428 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 PZPP20742 1482 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 IQSEC2Q5JU85 1478 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 SPATA31D1Q6ZQQ2 1576 aa9.97□□□□□ -0.81
TNFSF4-203ENST00000488053 TSPY4P0CV99 314 aa9.96□□□□□ -0.82
TNFSF4-203ENST00000488053 TSPY10P0CW01 314 aa9.96□□□□□ -0.82
TNFSF4-203ENST00000488053 RFC5P40937 340 aa9.96□□□□□ -0.82
TNFSF4-203ENST00000488053 TMEM259Q4ZIN3 620 aa9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 DESI1Q6ICB0 168 aa9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 FAM160A2Q8N612 972 aaPredicted RBP9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 NKX2-3Q8TAU0 364 aa9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 SLC6A16Q9GZN6 736 aa9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 NEURL4Q96JN8 1562 aa9.95□□□□□ -0.82
TNFSF4-203ENST00000488053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.94□□□□□ -0.82
TNFSF4-203ENST00000488053 CFAP99D6REC4 459 aa9.94□□□□□ -0.82
TNFSF4-203ENST00000488053 CEP152O94986 1710 aa9.93□□□□□ -0.82
TNFSF4-203ENST00000488053 GGCXP38435 758 aa9.93□□□□□ -0.82
TNFSF4-203ENST00000488053 RNF17Q9BXT8 1623 aaKnown RBP9.93□□□□□ -0.82
TNFSF4-203ENST00000488053 MAST1Q9Y2H9 1570 aa9.92□□□□□ -0.82
TNFSF4-203ENST00000488053 FAM135AQ9P2D6 1515 aa9.92□□□□□ -0.82
TNFSF4-203ENST00000488053 MIA2Q96PC5 1412 aa9.92□□□□□ -0.82
TNFSF4-203ENST00000488053 DXOO77932 396 aaKnown RBP9.92□□□□□ -0.82
TNFSF4-203ENST00000488053 JUNDP17535 347 aa9.92□□□□□ -0.82
TNFSF4-203ENST00000488053 UGGT1Q9NYU2 1555 aa9.92□□□□□ -0.82
TNFSF4-203ENST00000488053 ABCC3O15438 1527 aa9.92□□□□□ -0.82
TNFSF4-203ENST00000488053 MYOM3Q5VTT5 1437 aa9.91□□□□□ -0.82
TNFSF4-203ENST00000488053 MMP16P51512 607 aa9.91□□□□□ -0.82
TNFSF4-203ENST00000488053 PIP4K2BP78356 416 aa9.91□□□□□ -0.82
TNFSF4-203ENST00000488053 ANKLE2Q86XL3 938 aa9.91□□□□□ -0.82
TNFSF4-203ENST00000488053 TSC1Q92574 1164 aa9.91□□□□□ -0.82
TNFSF4-203ENST00000488053 ZC3H13Q5T200 1668 aaKnown RBP9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 MROH1Q8NDA8 1641 aa9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 EIF2AK4Q9P2K8 1649 aaKnown RBP9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 AP1G2O75843 785 aa9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 S1PR4O95977 384 aa9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 THEMISQ8N1K5 641 aaPredicted RBP9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
TNFSF4-203ENST00000488053 NLRP1Q9C000 1473 aa9.9□□□□□ -0.83
TNFSF4-203ENST00000488053 SHANK2Q9UPX8 1470 aa9.9□□□□□ -0.83
TNFSF4-203ENST00000488053 NPHP4O75161 1426 aaPredicted RBP9.9□□□□□ -0.83
TNFSF4-203ENST00000488053 ERVK-7P63135 1459 aa9.89□□□□□ -0.83
TNFSF4-203ENST00000488053 IQGAP1P46940 1657 aa9.89□□□□□ -0.83
TNFSF4-203ENST00000488053 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 CPS1P31327 1500 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 MAP3K1Q13233 1512 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 CROCC2H7BZ55 1655 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 SOCS7O14512 581 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 PTPRNQ16849 979 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 LYPD8Q6UX82 237 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 RRP7BPQ9NSQ0 103 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
TNFSF4-203ENST00000488053 DUOX2Q9NRD8 1548 aa9.87□□□□□ -0.83
TNFSF4-203ENST00000488053 DEPDC5O75140 1603 aa9.87□□□□□ -0.83
TNFSF4-203ENST00000488053 PTPN23Q9H3S7 1636 aa9.87□□□□□ -0.83
TNFSF4-203ENST00000488053 HSPA1LP34931 641 aa9.87□□□□□ -0.83
TNFSF4-203ENST00000488053 UBR1Q8IWV7 1749 aa9.87□□□□□ -0.83
TNFSF4-203ENST00000488053 USP17L8P0C7I0 530 aa9.86□□□□□ -0.83
TNFSF4-203ENST00000488053 PPP1R18Q6NYC8 613 aa9.86□□□□□ -0.83
TNFSF4-203ENST00000488053 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.86□□□□□ -0.83
TNFSF4-203ENST00000488053 KIF15Q9NS87 1388 aa9.86□□□□□ -0.83
TNFSF4-203ENST00000488053 MED14O60244 1454 aa9.85□□□□□ -0.83
TNFSF4-203ENST00000488053 ABCC5O15440 1437 aa9.85□□□□□ -0.83
TNFSF4-203ENST00000488053 TOM1O60784 492 aa9.85□□□□□ -0.83
TNFSF4-203ENST00000488053 CTDSPL2Q05D32 466 aa9.85□□□□□ -0.83
TNFSF4-203ENST00000488053 CHIC2Q9UKJ5 165 aa9.85□□□□□ -0.83
TNFSF4-203ENST00000488053 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
TNFSF4-203ENST00000488053 A0A0G2JS52 829 aa9.84□□□□□ -0.83
TNFSF4-203ENST00000488053 RNF223E7ERA6 249 aa9.84□□□□□ -0.83
TNFSF4-203ENST00000488053 CCNYL3P0C7X3 344 aa9.84□□□□□ -0.83
TNFSF4-203ENST00000488053 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
TNFSF4-203ENST00000488053 NUDT12Q9BQG2 462 aa9.84□□□□□ -0.83
TNFSF4-203ENST00000488053 DAPK1P53355 1430 aa9.83□□□□□ -0.84
TNFSF4-203ENST00000488053 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
TNFSF4-203ENST00000488053 APBB1O00213 710 aa9.83□□□□□ -0.84
TNFSF4-203ENST00000488053 PER1O15534 1290 aaPredicted RBP9.83□□□□□ -0.84
TNFSF4-203ENST00000488053 FLIIQ13045 1269 aa9.83□□□□□ -0.84
TNFSF4-203ENST00000488053 FCF1Q9Y324 198 aaKnown RBP9.83□□□□□ -0.84
TNFSF4-203ENST00000488053 FGD6Q6ZV73 1430 aa9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 ERBINQ96RT1 1412 aa9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 PIK3C2BO00750 1634 aa9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 ALKQ9UM73 1620 aa9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 LTKP29376 864 aa9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 TXNDC2Q86VQ3 553 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms