RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 NPM2Q86SE8 214 aaKnown RBP6.54□□□□□ -1.36
PCGF3-212ENST00000488032 CRIPAKQ8N1N5 446 aa6.54□□□□□ -1.36
PCGF3-212ENST00000488032 ESF1Q9H501 851 aaKnown RBP6.54□□□□□ -1.36
PCGF3-212ENST00000488032 CYLDQ9NQC7 956 aa6.54□□□□□ -1.36
PCGF3-212ENST00000488032 CAPN5O15484 640 aaPredicted RBP6.53□□□□□ -1.36
PCGF3-212ENST00000488032 LILRA1O75019 489 aa6.53□□□□□ -1.36
PCGF3-212ENST00000488032 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
PCGF3-212ENST00000488032 TSGA10IPQ3SY00 556 aa6.53□□□□□ -1.36
PCGF3-212ENST00000488032 CDCA7Q9BWT1 371 aaPredicted RBP6.53□□□□□ -1.36
PCGF3-212ENST00000488032 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
PCGF3-212ENST00000488032 NOD1Q9Y239 953 aa6.53□□□□□ -1.36
PCGF3-212ENST00000488032 ATP5J2-PTCD1G3V325 749 aa6.52□□□□□ -1.37
PCGF3-212ENST00000488032 SCTRP47872 440 aa6.52□□□□□ -1.37
PCGF3-212ENST00000488032 Q6ZVU0 165 aa6.52□□□□□ -1.37
PCGF3-212ENST00000488032 CYP2U1Q7Z449 544 aa6.52□□□□□ -1.37
PCGF3-212ENST00000488032 TRIM50Q86XT4 487 aa6.52□□□□□ -1.37
PCGF3-212ENST00000488032 DEPDC4Q8N2C3 294 aa6.52□□□□□ -1.37
PCGF3-212ENST00000488032 MEIOBQ8N635 442 aa6.52□□□□□ -1.37
PCGF3-212ENST00000488032 AXIN1O15169 862 aa6.51□□□□□ -1.37
PCGF3-212ENST00000488032 ADH1AP07327 375 aa6.51□□□□□ -1.37
PCGF3-212ENST00000488032 ATP1A2P50993 1020 aa6.51□□□□□ -1.37
PCGF3-212ENST00000488032 PBXIP1Q96AQ6 731 aa6.5□□□□□ -1.37
PCGF3-212ENST00000488032 OSBPL3Q9H4L5 887 aa6.5□□□□□ -1.37
PCGF3-212ENST00000488032 MKRN1Q9UHC7 482 aaKnown RBP6.5□□□□□ -1.37
PCGF3-212ENST00000488032 CDK11AQ9UQ88 783 aaPredicted RBP6.5□□□□□ -1.37
PCGF3-212ENST00000488032 PPP1R15AO75807 674 aaPredicted RBP6.49□□□□□ -1.37
PCGF3-212ENST00000488032 UPP2O95045 317 aa6.49□□□□□ -1.37
PCGF3-212ENST00000488032 RFX1P22670 979 aa6.49□□□□□ -1.37
PCGF3-212ENST00000488032 ADD1P35611 737 aaKnown RBP6.49□□□□□ -1.37
PCGF3-212ENST00000488032 GTF2IP78347 998 aa6.49□□□□□ -1.37
PCGF3-212ENST00000488032 CBLBQ13191 982 aa6.49□□□□□ -1.37
PCGF3-212ENST00000488032 ARID3AQ99856 593 aa6.49□□□□□ -1.37
PCGF3-212ENST00000488032 TSEN34Q9BSV6 310 aaKnown RBP6.49□□□□□ -1.37
PCGF3-212ENST00000488032 VRTNQ9H8Y1 702 aa6.49□□□□□ -1.37
PCGF3-212ENST00000488032 FAM196BA6NMK8 535 aa6.48□□□□□ -1.37
PCGF3-212ENST00000488032 GNRH1P01148 92 aa6.48□□□□□ -1.37
PCGF3-212ENST00000488032 KANK4Q5T7N3 995 aaPredicted RBP6.48□□□□□ -1.37
PCGF3-212ENST00000488032 Q6ZNB5 142 aa6.48□□□□□ -1.37
PCGF3-212ENST00000488032 LINC00528Q8N1L1 170 aa6.48□□□□□ -1.37
PCGF3-212ENST00000488032 AAASQ9NRG9 546 aa6.48□□□□□ -1.37
PCGF3-212ENST00000488032 MRPL14Q6P1L8 145 aaKnown RBP6.47□□□□□ -1.37
PCGF3-212ENST00000488032 LARP1Q6PKG0 1096 aaKnown RBP6.47□□□□□ -1.37
PCGF3-212ENST00000488032 LARGE2Q8N3Y3 721 aa6.47□□□□□ -1.37
PCGF3-212ENST00000488032 OGFOD1Q8N543 542 aa6.47□□□□□ -1.37
PCGF3-212ENST00000488032 DNAAF2Q9NVR5 837 aaKnown RBP6.47□□□□□ -1.37
PCGF3-212ENST00000488032 PCDHGA11Q9Y5H2 935 aa6.47□□□□□ -1.37
PCGF3-212ENST00000488032 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.46□□□□□ -1.38
PCGF3-212ENST00000488032 WASLO00401 505 aaPredicted RBP6.46□□□□□ -1.38
PCGF3-212ENST00000488032 ST8SIA5O15466 376 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 HMGB1P09429 215 aaKnown RBP6.46□□□□□ -1.38
PCGF3-212ENST00000488032 RASA1P20936 1047 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 PTGIRP43119 386 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 SRPK2P78362 688 aaKnown RBP6.46□□□□□ -1.38
PCGF3-212ENST00000488032 CLDN10P78369 228 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 PSME1Q06323 249 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 SCARF1Q14162 830 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 ESCO1Q5FWF5 840 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 SIX5Q8N196 739 aa6.46□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L15C9J2P7 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L10C9JJH3 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L13C9JLJ4 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L12C9JPN9 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L11C9JVI0 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L21D6R901 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L18D6R9N7 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L22D6RA61 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L17D6RBQ6 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L19D6RCP7 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L20D6RJB6 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 BMP1P13497 986 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 PDIA4P13667 645 aaKnown RBP6.45□□□□□ -1.38
PCGF3-212ENST00000488032 RELBQ01201 579 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 USP17L24Q0WX57 530 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 PTK7Q13308 1070 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 KDF1Q8NAX2 398 aaPredicted RBP6.45□□□□□ -1.38
PCGF3-212ENST00000488032 AGBL1Q96MI9 1066 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 ARHGEF10LQ9HCE6 1279 aa6.45□□□□□ -1.38
PCGF3-212ENST00000488032 RBM19Q9Y4C8 960 aaKnown RBP6.45□□□□□ -1.38
PCGF3-212ENST00000488032 SPINT1O43278 529 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 ATG7O95352 703 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 BMP2P12643 396 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 GDF10P55107 478 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 CLN3Q13286 438 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 ELOAQ14241 798 aaKnown RBP6.44□□□□□ -1.38
PCGF3-212ENST00000488032 CRTC2Q53ET0 693 aaPredicted RBP6.44□□□□□ -1.38
PCGF3-212ENST00000488032 CCDC102BQ68D86 513 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 TRIM46Q7Z4K8 759 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 ZNF594Q96JF6 807 aaPredicted RBP6.44□□□□□ -1.38
PCGF3-212ENST00000488032 ATP13A2Q9NQ11 1180 aa6.44□□□□□ -1.38
PCGF3-212ENST00000488032 A0A1W2PRU2 124 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 ZBTB7BO15156 539 aaPredicted RBP6.43□□□□□ -1.38
PCGF3-212ENST00000488032 INHAP05111 366 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 SCNN1DP51172 638 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 TPCN2Q8NHX9 752 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 PURBQ96QR8 312 aaKnown RBP6.43□□□□□ -1.38
PCGF3-212ENST00000488032 ETNK1Q9HBU6 452 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 SENP2Q9HC62 589 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 KIAA1024Q9UPX6 916 aa6.43□□□□□ -1.38
PCGF3-212ENST00000488032 TMEM229AB2RXF0 380 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms