RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 TMPOP42166 694 aaKnown RBP13.88□□□□□ -0.19
HLA-DMB-261ENST00000487996 NFE2L2Q16236 605 aa13.88□□□□□ -0.19
HLA-DMB-261ENST00000487996 AMOTQ4VCS5 1084 aa13.88□□□□□ -0.19
HLA-DMB-261ENST00000487996 USHBP1Q8N6Y0 703 aa13.88□□□□□ -0.19
HLA-DMB-261ENST00000487996 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
HLA-DMB-261ENST00000487996 C8orf37Q96NL8 207 aa13.87□□□□□ -0.19
HLA-DMB-261ENST00000487996 LRP6O75581 1613 aa13.87□□□□□ -0.19
HLA-DMB-261ENST00000487996 TATP17735 454 aaPredicted RBP13.87□□□□□ -0.19
HLA-DMB-261ENST00000487996 PDE3BQ13370 1112 aa13.87□□□□□ -0.19
HLA-DMB-261ENST00000487996 LARP1Q6PKG0 1096 aaKnown RBP13.87□□□□□ -0.19
HLA-DMB-261ENST00000487996 PHACTR3Q96KR7 559 aa13.87□□□□□ -0.19
HLA-DMB-261ENST00000487996 NRAPQ86VF7 1730 aa13.87□□□□□ -0.19
HLA-DMB-261ENST00000487996 RIPK4P57078 832 aa13.86□□□□□ -0.19
HLA-DMB-261ENST00000487996 PLEKHO1Q53GL0 409 aaPredicted RBP13.86□□□□□ -0.19
HLA-DMB-261ENST00000487996 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
HLA-DMB-261ENST00000487996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
HLA-DMB-261ENST00000487996 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-261ENST00000487996 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
HLA-DMB-261ENST00000487996 UNC5CLQ8IV45 518 aa13.85□□□□□ -0.19
HLA-DMB-261ENST00000487996 SALL2Q9Y467 1007 aaPredicted RBP13.85□□□□□ -0.19
HLA-DMB-261ENST00000487996 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
HLA-DMB-261ENST00000487996 THRAP3Q9Y2W1 955 aaKnown RBP13.84□□□□□ -0.19
HLA-DMB-261ENST00000487996 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
HLA-DMB-261ENST00000487996 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
HLA-DMB-261ENST00000487996 IL2RBP14784 551 aa13.84□□□□□ -0.19
HLA-DMB-261ENST00000487996 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
HLA-DMB-261ENST00000487996 CDCA7Q9BWT1 371 aaPredicted RBP13.84□□□□□ -0.19
HLA-DMB-261ENST00000487996 SPG7Q9UQ90 795 aa13.84□□□□□ -0.19
HLA-DMB-261ENST00000487996 HTATSF1O43719 755 aaKnown RBP13.83□□□□□ -0.2
HLA-DMB-261ENST00000487996 WDR63Q8IWG1 891 aa13.83□□□□□ -0.2
HLA-DMB-261ENST00000487996 RTF1Q92541 710 aaKnown RBP13.83□□□□□ -0.2
HLA-DMB-261ENST00000487996 ZNF521Q96K83 1311 aa13.83□□□□□ -0.2
HLA-DMB-261ENST00000487996 DLG5Q8TDM6 1919 aa13.83□□□□□ -0.2
HLA-DMB-261ENST00000487996 OVOS2A0A0G2JMS6 1433 aa13.82□□□□□ -0.2
HLA-DMB-261ENST00000487996 GOLGA2Q08379 1002 aa13.82□□□□□ -0.2
HLA-DMB-261ENST00000487996 MTHFSDQ2M296 383 aaKnown RBP13.82□□□□□ -0.2
HLA-DMB-261ENST00000487996 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
HLA-DMB-261ENST00000487996 MEGF6O75095 1541 aa13.82□□□□□ -0.2
HLA-DMB-261ENST00000487996 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 VPS72Q15906 364 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 USP21Q9UK80 565 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 BCL9LQ86UU0 1499 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 SPATA31A1Q5TZJ5 1347 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 MAP3K5Q99683 1374 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 SENP3-EIF4A1A0A087X0R7 540 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 SPATA31A5Q5VU36 1347 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 SPATA31A7Q8IWB4 1347 aa13.81□□□□□ -0.2
HLA-DMB-261ENST00000487996 AKAP4Q5JQC9 854 aa13.8□□□□□ -0.2
HLA-DMB-261ENST00000487996 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
HLA-DMB-261ENST00000487996 AFF2P51816 1311 aa13.8□□□□□ -0.2
HLA-DMB-261ENST00000487996 IL16Q14005 1332 aa13.8□□□□□ -0.2
HLA-DMB-261ENST00000487996 E9PSI1 815 aa13.79□□□□□ -0.2
HLA-DMB-261ENST00000487996 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
HLA-DMB-261ENST00000487996 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
HLA-DMB-261ENST00000487996 WNK3Q9BYP7 1800 aa13.79□□□□□ -0.2
HLA-DMB-261ENST00000487996 HSP90AB1P08238 724 aaKnown RBP13.78□□□□□ -0.2
HLA-DMB-261ENST00000487996 BARGINQ6ZT62 677 aa13.78□□□□□ -0.2
HLA-DMB-261ENST00000487996 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
HLA-DMB-261ENST00000487996 IFNL2Q8IZJ0 200 aa13.78□□□□□ -0.2
HLA-DMB-261ENST00000487996 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
HLA-DMB-261ENST00000487996 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMB-261ENST00000487996 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
HLA-DMB-261ENST00000487996 SLFN5Q08AF3 891 aa13.76□□□□□ -0.21
HLA-DMB-261ENST00000487996 ZNF772Q68DY9 489 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-261ENST00000487996 ATRNO75882 1429 aa13.75□□□□□ -0.21
HLA-DMB-261ENST00000487996 EXOC5O00471 708 aa13.75□□□□□ -0.21
HLA-DMB-261ENST00000487996 PHKG2P15735 406 aa13.75□□□□□ -0.21
HLA-DMB-261ENST00000487996 GNAI1P63096 354 aa13.75□□□□□ -0.21
HLA-DMB-261ENST00000487996 IFT57Q9NWB7 429 aa13.75□□□□□ -0.21
HLA-DMB-261ENST00000487996 TNS2Q63HR2 1409 aa13.74□□□□□ -0.21
HLA-DMB-261ENST00000487996 DCAF5Q96JK2 942 aa13.74□□□□□ -0.21
HLA-DMB-261ENST00000487996 CEMIPQ8WUJ3 1361 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 MCM10Q7L590 875 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 GJD4Q96KN9 370 aaPredicted RBP13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 SPINK5Q9NQ38 1064 aaPredicted RBP13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 BABAM1Q9NWV8 329 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 CYP27B1O15528 508 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 DDB1Q16531 1140 aa13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
HLA-DMB-261ENST00000487996 ADAMTS7Q9UKP4 1686 aa13.72□□□□□ -0.21
HLA-DMB-261ENST00000487996 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
HLA-DMB-261ENST00000487996 TEFQ10587 303 aa13.72□□□□□ -0.21
HLA-DMB-261ENST00000487996 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
HLA-DMB-261ENST00000487996 VIRMAQ69YN4 1812 aaKnown RBP13.72□□□□□ -0.21
HLA-DMB-261ENST00000487996 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.21
HLA-DMB-261ENST00000487996 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.21
HLA-DMB-261ENST00000487996 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMB-261ENST00000487996 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
HLA-DMB-261ENST00000487996 MPRIPQ6WCQ1 1025 aa13.71□□□□□ -0.21
HLA-DMB-261ENST00000487996 IL17REQ8NFR9 667 aa13.71□□□□□ -0.21
HLA-DMB-261ENST00000487996 THUMPD2Q9BTF0 503 aaKnown RBP13.71□□□□□ -0.21
HLA-DMB-261ENST00000487996 QTRT2Q9H974 415 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms