RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 NPC1L1Q9UHC9 1359 aa19.24■□□□□ 0.67
PFKFB3-213ENST00000487989 KCNQ2O43526 872 aa19.24■□□□□ 0.67
PFKFB3-213ENST00000487989 SBF2Q86WG5 1849 aa19.23■□□□□ 0.67
PFKFB3-213ENST00000487989 PARD3Q8TEW0 1356 aa19.22■□□□□ 0.67
PFKFB3-213ENST00000487989 MTHFSP49914 203 aa19.22■□□□□ 0.67
PFKFB3-213ENST00000487989 NCAPD2Q15021 1401 aa19.22■□□□□ 0.67
PFKFB3-213ENST00000487989 PLSCR1O15162 318 aa19.21■□□□□ 0.67
PFKFB3-213ENST00000487989 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
PFKFB3-213ENST00000487989 IGSF1Q8N6C5 1336 aa19.19■□□□□ 0.66
PFKFB3-213ENST00000487989 PCDH11XQ9BZA7 1347 aa19.19■□□□□ 0.66
PFKFB3-213ENST00000487989 PCDH11YQ9BZA8 1340 aa19.19■□□□□ 0.66
PFKFB3-213ENST00000487989 SPG7Q9UQ90 795 aa19.18■□□□□ 0.66
PFKFB3-213ENST00000487989 IL13P35225 146 aa19.17■□□□□ 0.66
PFKFB3-213ENST00000487989 SYTL4Q96C24 671 aaPredicted RBP19.17■□□□□ 0.66
PFKFB3-213ENST00000487989 NHSQ6T4R5 1651 aa19.17■□□□□ 0.66
PFKFB3-213ENST00000487989 SHANK3Q9BYB0 1731 aa19.17■□□□□ 0.66
PFKFB3-213ENST00000487989 CYP27B1O15528 508 aa19.16■□□□□ 0.66
PFKFB3-213ENST00000487989 PRIM1P49642 420 aaKnown RBP19.16■□□□□ 0.66
PFKFB3-213ENST00000487989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.16■□□□□ 0.66
PFKFB3-213ENST00000487989 PSDA5PKW4 1024 aaPredicted RBP19.15■□□□□ 0.66
PFKFB3-213ENST00000487989 R3HDM1Q15032 1099 aaKnown RBP19.14■□□□□ 0.65
PFKFB3-213ENST00000487989 NBPF14Q5TI25 921 aa19.14■□□□□ 0.65
PFKFB3-213ENST00000487989 PROM2Q8N271 834 aa19.14■□□□□ 0.65
PFKFB3-213ENST00000487989 DIAPH1O60610 1272 aaKnown RBP19.13■□□□□ 0.65
PFKFB3-213ENST00000487989 TXNRD1Q16881 649 aa19.13■□□□□ 0.65
PFKFB3-213ENST00000487989 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
PFKFB3-213ENST00000487989 AEBP1Q8IUX7 1158 aa19.13■□□□□ 0.65
PFKFB3-213ENST00000487989 RREB1Q92766 1687 aa19.13■□□□□ 0.65
PFKFB3-213ENST00000487989 RGPD3A6NKT7 1758 aaPredicted RBP19.12■□□□□ 0.65
PFKFB3-213ENST00000487989 RGPD4Q7Z3J3 1758 aa19.12■□□□□ 0.65
PFKFB3-213ENST00000487989 SRCAPQ6ZRS2 3230 aa19.12■□□□□ 0.65
PFKFB3-213ENST00000487989 PKD1L3Q7Z443 1732 aa19.11■□□□□ 0.65
PFKFB3-213ENST00000487989 PLEKHO1Q53GL0 409 aaPredicted RBP19.11■□□□□ 0.65
PFKFB3-213ENST00000487989 PLEKHG2Q9H7P9 1386 aa19.1■□□□□ 0.65
PFKFB3-213ENST00000487989 DDX10Q13206 875 aaKnown RBP19.1■□□□□ 0.65
PFKFB3-213ENST00000487989 NKX1-1Q15270 411 aaPredicted RBP19.1■□□□□ 0.65
PFKFB3-213ENST00000487989 IFNL2Q8IZJ0 200 aa19.1■□□□□ 0.65
PFKFB3-213ENST00000487989 NUP188Q5SRE5 1749 aa19.1■□□□□ 0.65
PFKFB3-213ENST00000487989 DOT1LQ8TEK3 1739 aa19.1■□□□□ 0.65
PFKFB3-213ENST00000487989 KAT6BQ8WYB5 2073 aa19.1■□□□□ 0.65
PFKFB3-213ENST00000487989 BTAF1O14981 1849 aa19.09■□□□□ 0.65
PFKFB3-213ENST00000487989 PHKG2P15735 406 aa19.09■□□□□ 0.65
PFKFB3-213ENST00000487989 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
PFKFB3-213ENST00000487989 AMOTQ4VCS5 1084 aa19.09■□□□□ 0.65
PFKFB3-213ENST00000487989 KDRP35968 1356 aa19.08■□□□□ 0.65
PFKFB3-213ENST00000487989 CFAP53Q96M91 514 aa19.08■□□□□ 0.64
PFKFB3-213ENST00000487989 HMOX1P09601 288 aa19.07■□□□□ 0.64
PFKFB3-213ENST00000487989 MPRIPQ6WCQ1 1025 aa19.07■□□□□ 0.64
PFKFB3-213ENST00000487989 U2SURPO15042 1029 aaKnown RBP19.06■□□□□ 0.64
PFKFB3-213ENST00000487989 ZNF530Q6P9A1 599 aaPredicted RBP19.06■□□□□ 0.64
PFKFB3-213ENST00000487989 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
PFKFB3-213ENST00000487989 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
PFKFB3-213ENST00000487989 SLC27A3Q5K4L6 730 aa19.04■□□□□ 0.64
PFKFB3-213ENST00000487989 LRRC4BQ9NT99 713 aa19.04■□□□□ 0.64
PFKFB3-213ENST00000487989 HSP90AB1P08238 724 aaKnown RBP19.03■□□□□ 0.64
PFKFB3-213ENST00000487989 C1orf141Q5JVX7 400 aa19.03■□□□□ 0.64
PFKFB3-213ENST00000487989 PIGBQ92521 554 aa19.03■□□□□ 0.64
PFKFB3-213ENST00000487989 STK32BQ9NY57 414 aa19.03■□□□□ 0.64
PFKFB3-213ENST00000487989 DCAF5Q96JK2 942 aa19.02■□□□□ 0.64
PFKFB3-213ENST00000487989 TMOD3Q9NYL9 352 aa19.02■□□□□ 0.64
PFKFB3-213ENST00000487989 TOGARAM1Q9Y4F4 1720 aa19.02■□□□□ 0.63
PFKFB3-213ENST00000487989 KCNQ4P56696 695 aa19.01■□□□□ 0.63
PFKFB3-213ENST00000487989 SLC15A2Q16348 729 aa19.01■□□□□ 0.63
PFKFB3-213ENST00000487989 NUDCQ9Y266 331 aa19.01■□□□□ 0.63
PFKFB3-213ENST00000487989 CCNL1Q9UK58 526 aaPredicted RBP19■□□□□ 0.63
PFKFB3-213ENST00000487989 ERVV-2B6SEH9 535 aa18.99■□□□□ 0.63
PFKFB3-213ENST00000487989 SMARCC1Q92922 1105 aaPredicted RBP18.99■□□□□ 0.63
PFKFB3-213ENST00000487989 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
PFKFB3-213ENST00000487989 ITGB4P16144 1822 aa18.97■□□□□ 0.63
PFKFB3-213ENST00000487989 CABP4P57796 275 aa18.97■□□□□ 0.63
PFKFB3-213ENST00000487989 RALBP1Q15311 655 aa18.97■□□□□ 0.63
PFKFB3-213ENST00000487989 MTHFSDQ2M296 383 aaKnown RBP18.97■□□□□ 0.63
PFKFB3-213ENST00000487989 AKAP4Q5JQC9 854 aa18.97■□□□□ 0.63
PFKFB3-213ENST00000487989 U2AF1L5P0DN76 240 aaPredicted RBP18.96■□□□□ 0.63
PFKFB3-213ENST00000487989 U2AF1Q01081 240 aaKnown RBP eCLIP18.96■□□□□ 0.63
PFKFB3-213ENST00000487989 ZNF827Q17R98 1081 aa18.96■□□□□ 0.63
PFKFB3-213ENST00000487989 ASAP1Q9ULH1 1129 aa18.96■□□□□ 0.63
PFKFB3-213ENST00000487989 KDM6AO15550 1401 aaPredicted RBP18.96■□□□□ 0.63
PFKFB3-213ENST00000487989 LY75O60449 1722 aa18.96■□□□□ 0.63
PFKFB3-213ENST00000487989 AKT1S1Q96B36 256 aa18.95■□□□□ 0.62
PFKFB3-213ENST00000487989 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
PFKFB3-213ENST00000487989 PAPPAQ13219 1627 aa18.95■□□□□ 0.62
PFKFB3-213ENST00000487989 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
PFKFB3-213ENST00000487989 ATG3Q9NT62 314 aa18.94■□□□□ 0.62
PFKFB3-213ENST00000487989 PRKAR2BP31323 418 aa18.93■□□□□ 0.62
PFKFB3-213ENST00000487989 NFATC2IPQ8NCF5 419 aa18.93■□□□□ 0.62
PFKFB3-213ENST00000487989 HMGB2P26583 209 aaKnown RBP18.92■□□□□ 0.62
PFKFB3-213ENST00000487989 LGR6Q9HBX8 967 aa18.92■□□□□ 0.62
PFKFB3-213ENST00000487989 TFCP2L1Q9NZI6 479 aa18.92■□□□□ 0.62
PFKFB3-213ENST00000487989 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 ZNF316A6NFI3 1004 aaPredicted RBP18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 RNMTO43148 476 aaKnown RBP18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 FCHSD2O94868 740 aa18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 SIK1P57059 783 aa18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 GAS2L2Q8NHY3 880 aa18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 PHACTR3Q96KR7 559 aa18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 SPON1Q9HCB6 807 aa18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 LRP5O75197 1615 aa18.91■□□□□ 0.62
PFKFB3-213ENST00000487989 ZBTB7AO95365 584 aa18.9■□□□□ 0.62
PFKFB3-213ENST00000487989 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms