RNA–Protein interactions for RNA: ENST00000487820.1

CTTNBP2-212, Transcript of cortactin binding protein 2, humanhuman

TSL 3

Gene CTTNBP2, Length 379 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-212ENST00000487820 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
CTTNBP2-212ENST00000487820 SBF2Q86WG5 1849 aa16.4■□□□□ 0.22
CTTNBP2-212ENST00000487820 COL3A1P02461 1466 aaPredicted RBP16.39■□□□□ 0.21
CTTNBP2-212ENST00000487820 RGPD1P0DJD0 1748 aa16.39■□□□□ 0.21
CTTNBP2-212ENST00000487820 KCNQ2O43526 872 aa16.38■□□□□ 0.21
CTTNBP2-212ENST00000487820 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
CTTNBP2-212ENST00000487820 KAT6BQ8WYB5 2073 aa16.38■□□□□ 0.21
CTTNBP2-212ENST00000487820 HMOX1P09601 288 aa16.37■□□□□ 0.21
CTTNBP2-212ENST00000487820 EN1Q05925 392 aaPredicted RBP16.37■□□□□ 0.21
CTTNBP2-212ENST00000487820 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
CTTNBP2-212ENST00000487820 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
CTTNBP2-212ENST00000487820 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
CTTNBP2-212ENST00000487820 APBA3O96018 575 aa16.36■□□□□ 0.21
CTTNBP2-212ENST00000487820 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
CTTNBP2-212ENST00000487820 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
CTTNBP2-212ENST00000487820 U2SURPO15042 1029 aaKnown RBP16.34■□□□□ 0.21
CTTNBP2-212ENST00000487820 CYP27B1O15528 508 aa16.34■□□□□ 0.21
CTTNBP2-212ENST00000487820 EZH2Q15910 746 aaKnown RBP16.34■□□□□ 0.21
CTTNBP2-212ENST00000487820 BAG6P46379 1132 aa16.33■□□□□ 0.2
CTTNBP2-212ENST00000487820 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.2
CTTNBP2-212ENST00000487820 BCL9O00512 1426 aa16.32■□□□□ 0.2
CTTNBP2-212ENST00000487820 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
CTTNBP2-212ENST00000487820 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
CTTNBP2-212ENST00000487820 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
CTTNBP2-212ENST00000487820 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
CTTNBP2-212ENST00000487820 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
CTTNBP2-212ENST00000487820 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
CTTNBP2-212ENST00000487820 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
CTTNBP2-212ENST00000487820 PRIM1P49642 420 aaKnown RBP16.3■□□□□ 0.2
CTTNBP2-212ENST00000487820 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
CTTNBP2-212ENST00000487820 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
CTTNBP2-212ENST00000487820 KDRP35968 1356 aa16.29■□□□□ 0.2
CTTNBP2-212ENST00000487820 BTAF1O14981 1849 aa16.29■□□□□ 0.2
CTTNBP2-212ENST00000487820 RALBP1Q15311 655 aa16.29■□□□□ 0.2
CTTNBP2-212ENST00000487820 PHKG2P15735 406 aa16.28■□□□□ 0.2
CTTNBP2-212ENST00000487820 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
CTTNBP2-212ENST00000487820 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
CTTNBP2-212ENST00000487820 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
CTTNBP2-212ENST00000487820 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
CTTNBP2-212ENST00000487820 IFNL2Q8IZJ0 200 aa16.26■□□□□ 0.19
CTTNBP2-212ENST00000487820 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
CTTNBP2-212ENST00000487820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
CTTNBP2-212ENST00000487820 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
CTTNBP2-212ENST00000487820 ITGB4P16144 1822 aa16.25■□□□□ 0.19
CTTNBP2-212ENST00000487820 RREB1Q92766 1687 aa16.24■□□□□ 0.19
CTTNBP2-212ENST00000487820 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
CTTNBP2-212ENST00000487820 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
CTTNBP2-212ENST00000487820 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
CTTNBP2-212ENST00000487820 PROM2Q8N271 834 aa16.24■□□□□ 0.19
CTTNBP2-212ENST00000487820 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
CTTNBP2-212ENST00000487820 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
CTTNBP2-212ENST00000487820 NUP188Q5SRE5 1749 aa16.23■□□□□ 0.19
CTTNBP2-212ENST00000487820 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
CTTNBP2-212ENST00000487820 KCNQ4P56696 695 aa16.23■□□□□ 0.19
CTTNBP2-212ENST00000487820 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
CTTNBP2-212ENST00000487820 AMOTQ4VCS5 1084 aa16.23■□□□□ 0.19
CTTNBP2-212ENST00000487820 PLSCR1O15162 318 aa16.22■□□□□ 0.19
CTTNBP2-212ENST00000487820 C1orf141Q5JVX7 400 aa16.22■□□□□ 0.19
CTTNBP2-212ENST00000487820 PHACTR3Q96KR7 559 aa16.22■□□□□ 0.19
CTTNBP2-212ENST00000487820 PSDA5PKW4 1024 aaPredicted RBP16.21■□□□□ 0.19
CTTNBP2-212ENST00000487820 TXNRD1Q16881 649 aa16.21■□□□□ 0.19
CTTNBP2-212ENST00000487820 CCDC184Q52MB2 194 aa16.2■□□□□ 0.18
CTTNBP2-212ENST00000487820 PIGBQ92521 554 aa16.2■□□□□ 0.18
CTTNBP2-212ENST00000487820 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
CTTNBP2-212ENST00000487820 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
CTTNBP2-212ENST00000487820 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
CTTNBP2-212ENST00000487820 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
CTTNBP2-212ENST00000487820 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
CTTNBP2-212ENST00000487820 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
CTTNBP2-212ENST00000487820 VIRMAQ69YN4 1812 aaKnown RBP16.18■□□□□ 0.18
CTTNBP2-212ENST00000487820 AKAP4Q5JQC9 854 aa16.18■□□□□ 0.18
CTTNBP2-212ENST00000487820 DCAF5Q96JK2 942 aa16.18■□□□□ 0.18
CTTNBP2-212ENST00000487820 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
CTTNBP2-212ENST00000487820 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
CTTNBP2-212ENST00000487820 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
CTTNBP2-212ENST00000487820 SCN11AQ9UI33 1791 aa16.16■□□□□ 0.18
CTTNBP2-212ENST00000487820 RNMTO43148 476 aaKnown RBP16.16■□□□□ 0.18
CTTNBP2-212ENST00000487820 FCHSD2O94868 740 aa16.16■□□□□ 0.18
CTTNBP2-212ENST00000487820 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
CTTNBP2-212ENST00000487820 CABP4P57796 275 aa16.16■□□□□ 0.18
CTTNBP2-212ENST00000487820 LY75O60449 1722 aa16.16■□□□□ 0.18
CTTNBP2-212ENST00000487820 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
CTTNBP2-212ENST00000487820 ANP32CO43423 234 aa16.15■□□□□ 0.18
CTTNBP2-212ENST00000487820 MAP3K5Q99683 1374 aa16.14■□□□□ 0.17
CTTNBP2-212ENST00000487820 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
CTTNBP2-212ENST00000487820 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
CTTNBP2-212ENST00000487820 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
CTTNBP2-212ENST00000487820 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
CTTNBP2-212ENST00000487820 PLEKHF1Q96S99 279 aa16.14■□□□□ 0.17
CTTNBP2-212ENST00000487820 ATG3Q9NT62 314 aa16.14■□□□□ 0.17
CTTNBP2-212ENST00000487820 DCTN1Q14203 1278 aa16.13■□□□□ 0.17
CTTNBP2-212ENST00000487820 ZNF827Q17R98 1081 aa16.13■□□□□ 0.17
CTTNBP2-212ENST00000487820 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
CTTNBP2-212ENST00000487820 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
CTTNBP2-212ENST00000487820 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
CTTNBP2-212ENST00000487820 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
CTTNBP2-212ENST00000487820 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
CTTNBP2-212ENST00000487820 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
CTTNBP2-212ENST00000487820 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
CTTNBP2-212ENST00000487820 MCM10Q7L590 875 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms