RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 RRAGCQ9HB90 399 aa11.44□□□□□ -0.58
RTCB-205ENST00000487704 PXDNLA1KZ92 1463 aa11.44□□□□□ -0.58
RTCB-205ENST00000487704 LY75O60449 1722 aa11.43□□□□□ -0.58
RTCB-205ENST00000487704 FOXN1O15353 648 aa11.43□□□□□ -0.58
RTCB-205ENST00000487704 ARHGAP27Q6ZUM4 889 aa11.43□□□□□ -0.58
RTCB-205ENST00000487704 ABHD8Q96I13 439 aa11.43□□□□□ -0.58
RTCB-205ENST00000487704 PRIM1P49642 420 aaKnown RBP11.42□□□□□ -0.58
RTCB-205ENST00000487704 ANKRD36BQ8N2N9 1353 aa11.41□□□□□ -0.58
RTCB-205ENST00000487704 RGPD5Q99666 1765 aa11.41□□□□□ -0.58
RTCB-205ENST00000487704 PIK3C2AO00443 1686 aa11.41□□□□□ -0.58
RTCB-205ENST00000487704 CTCFP49711 727 aaPredicted RBP11.41□□□□□ -0.58
RTCB-205ENST00000487704 TGFB2P61812 414 aa11.41□□□□□ -0.58
RTCB-205ENST00000487704 C9orf131Q5VYM1 1079 aa11.41□□□□□ -0.58
RTCB-205ENST00000487704 BCS1LQ9Y276 419 aa11.4□□□□□ -0.58
RTCB-205ENST00000487704 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.58
RTCB-205ENST00000487704 NSD2O96028 1365 aa11.4□□□□□ -0.59
RTCB-205ENST00000487704 KCPQ6ZWJ8 1503 aa11.4□□□□□ -0.59
RTCB-205ENST00000487704 SYTL4Q96C24 671 aaPredicted RBP11.39□□□□□ -0.59
RTCB-205ENST00000487704 NLRP2Q9NX02 1062 aa11.39□□□□□ -0.59
RTCB-205ENST00000487704 ERBB3P21860 1342 aa11.38□□□□□ -0.59
RTCB-205ENST00000487704 DDX54Q8TDD1 881 aaKnown RBP11.38□□□□□ -0.59
RTCB-205ENST00000487704 MPHOSPH9Q99550 1183 aa11.38□□□□□ -0.59
RTCB-205ENST00000487704 TNRC6CQ9HCJ0 1690 aaKnown RBP11.36□□□□□ -0.59
RTCB-205ENST00000487704 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
RTCB-205ENST00000487704 STAC3Q96MF2 364 aa11.36□□□□□ -0.59
RTCB-205ENST00000487704 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
RTCB-205ENST00000487704 USP47Q96K76 1375 aa11.36□□□□□ -0.59
RTCB-205ENST00000487704 A0A0G2JLW4 131 aa11.35□□□□□ -0.59
RTCB-205ENST00000487704 AIDAQ96BJ3 306 aa11.35□□□□□ -0.59
RTCB-205ENST00000487704 USP54Q70EL1 1684 aa11.35□□□□□ -0.59
RTCB-205ENST00000487704 FCHSD2O94868 740 aa11.34□□□□□ -0.59
RTCB-205ENST00000487704 LBX1P52954 281 aa11.34□□□□□ -0.59
RTCB-205ENST00000487704 WBP1LQ9NX94 342 aa11.34□□□□□ -0.59
RTCB-205ENST00000487704 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
RTCB-205ENST00000487704 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
RTCB-205ENST00000487704 ZC3H4Q9UPT8 1303 aaKnown RBP11.34□□□□□ -0.59
RTCB-205ENST00000487704 QRICH2Q9H0J4 1663 aa11.33□□□□□ -0.6
RTCB-205ENST00000487704 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
RTCB-205ENST00000487704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
RTCB-205ENST00000487704 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
RTCB-205ENST00000487704 SOX12O15370 315 aa11.33□□□□□ -0.6
RTCB-205ENST00000487704 SRPK2P78362 688 aaKnown RBP11.33□□□□□ -0.6
RTCB-205ENST00000487704 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
RTCB-205ENST00000487704 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
RTCB-205ENST00000487704 NFAT5O94916 1531 aa11.33□□□□□ -0.6
RTCB-205ENST00000487704 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
RTCB-205ENST00000487704 C5P01031 1676 aa11.32□□□□□ -0.6
RTCB-205ENST00000487704 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
RTCB-205ENST00000487704 PKD1L3Q7Z443 1732 aa11.32□□□□□ -0.6
RTCB-205ENST00000487704 KIAA1551Q9HCM1 1747 aa11.32□□□□□ -0.6
RTCB-205ENST00000487704 CNTNAP1P78357 1384 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 DPEP1P16444 411 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 KCNA3P22001 575 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 SSFA2P28290 1259 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 AK7Q96M32 723 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 TTC21BQ7Z4L5 1316 aa11.31□□□□□ -0.6
RTCB-205ENST00000487704 TNRC18O15417 2968 aaPredicted RBP11.31□□□□□ -0.6
RTCB-205ENST00000487704 GLTPD2A6NH11 291 aa11.3□□□□□ -0.6
RTCB-205ENST00000487704 MMP10P09238 476 aa11.3□□□□□ -0.6
RTCB-205ENST00000487704 ANKRD24Q8TF21 1146 aa11.3□□□□□ -0.6
RTCB-205ENST00000487704 TTC21AQ8NDW8 1320 aa11.3□□□□□ -0.6
RTCB-205ENST00000487704 PDE4DIPQ5VU43 2346 aa11.3□□□□□ -0.6
RTCB-205ENST00000487704 N4BP2Q86UW6 1770 aaPredicted RBP11.29□□□□□ -0.6
RTCB-205ENST00000487704 PHF14O94880 888 aa11.29□□□□□ -0.6
RTCB-205ENST00000487704 HSPA8P11142 646 aaKnown RBP11.29□□□□□ -0.6
RTCB-205ENST00000487704 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
RTCB-205ENST00000487704 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
RTCB-205ENST00000487704 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
RTCB-205ENST00000487704 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
RTCB-205ENST00000487704 DCAF11Q8TEB1 546 aa11.28□□□□□ -0.6
RTCB-205ENST00000487704 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
RTCB-205ENST00000487704 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
RTCB-205ENST00000487704 C4BP0C0L5 1744 aa11.27□□□□□ -0.61
RTCB-205ENST00000487704 TOGARAM1Q9Y4F4 1720 aa11.27□□□□□ -0.61
RTCB-205ENST00000487704 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.61
RTCB-205ENST00000487704 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
RTCB-205ENST00000487704 PALLDQ8WX93 1383 aa11.27□□□□□ -0.61
RTCB-205ENST00000487704 POTECB2RU33 542 aa11.26□□□□□ -0.61
RTCB-205ENST00000487704 VEGFBP49765 207 aa11.26□□□□□ -0.61
RTCB-205ENST00000487704 NLGN1Q8N2Q7 840 aa11.26□□□□□ -0.61
RTCB-205ENST00000487704 SBF1O95248 1867 aa11.25□□□□□ -0.61
RTCB-205ENST00000487704 DALRD3Q5D0E6 543 aaKnown RBP11.25□□□□□ -0.61
RTCB-205ENST00000487704 CCDC87Q9NVE4 849 aa11.25□□□□□ -0.61
RTCB-205ENST00000487704 KDM6AO15550 1401 aaPredicted RBP11.25□□□□□ -0.61
RTCB-205ENST00000487704 MAP2K1Q02750 393 aaPredicted RBP11.24□□□□□ -0.61
RTCB-205ENST00000487704 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
RTCB-205ENST00000487704 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
RTCB-205ENST00000487704 TMF1P82094 1093 aa11.23□□□□□ -0.61
RTCB-205ENST00000487704 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
RTCB-205ENST00000487704 LMNB1P20700 586 aa11.22□□□□□ -0.61
RTCB-205ENST00000487704 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.61
RTCB-205ENST00000487704 PASKQ96RG2 1323 aa11.21□□□□□ -0.61
RTCB-205ENST00000487704 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.61
RTCB-205ENST00000487704 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.61
RTCB-205ENST00000487704 IP6K1Q92551 441 aa11.21□□□□□ -0.61
RTCB-205ENST00000487704 CGNL1Q0VF96 1302 aa11.2□□□□□ -0.62
RTCB-205ENST00000487704 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms