RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 ZNF526Q8TF50 670 aaPredicted RBP23.53■■□□□ 1.36
TOM1-214ENST00000487670 COL23A1Q86Y22 540 aaPredicted RBP23.52■■□□□ 1.36
TOM1-214ENST00000487670 ITGB4P16144 1822 aa23.52■■□□□ 1.36
TOM1-214ENST00000487670 UBR3Q6ZT12 1888 aa23.51■■□□□ 1.35
TOM1-214ENST00000487670 PRIM1P49642 420 aaKnown RBP23.51■■□□□ 1.35
TOM1-214ENST00000487670 SYTL4Q96C24 671 aaPredicted RBP23.51■■□□□ 1.35
TOM1-214ENST00000487670 MEGF6O75095 1541 aa23.5■■□□□ 1.35
TOM1-214ENST00000487670 ANKRD36BQ8N2N9 1353 aa23.5■■□□□ 1.35
TOM1-214ENST00000487670 LTV1Q96GA3 475 aaPredicted RBP23.48■■□□□ 1.35
TOM1-214ENST00000487670 WWC3Q9ULE0 1092 aa23.48■■□□□ 1.35
TOM1-214ENST00000487670 MSH5O43196 834 aa23.47■■□□□ 1.35
TOM1-214ENST00000487670 GRIN3BO60391 1043 aa23.47■■□□□ 1.35
TOM1-214ENST00000487670 HSPA6P17066 643 aa23.47■■□□□ 1.35
TOM1-214ENST00000487670 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
TOM1-214ENST00000487670 GPBP1L1Q9HC44 474 aaPredicted RBP23.46■■□□□ 1.35
TOM1-214ENST00000487670 CCNL1Q9UK58 526 aaPredicted RBP23.45■■□□□ 1.34
TOM1-214ENST00000487670 C4BP0C0L5 1744 aa23.45■■□□□ 1.34
TOM1-214ENST00000487670 KIAA1551Q9HCM1 1747 aa23.45■■□□□ 1.34
TOM1-214ENST00000487670 ROCK2O75116 1388 aaKnown RBP23.43■■□□□ 1.34
TOM1-214ENST00000487670 N4BP2Q86UW6 1770 aaPredicted RBP23.43■■□□□ 1.34
TOM1-214ENST00000487670 FBLN1P23142 703 aa23.42■■□□□ 1.34
TOM1-214ENST00000487670 AMIGO3Q86WK7 504 aa23.42■■□□□ 1.34
TOM1-214ENST00000487670 SMIM5Q71RC9 77 aa23.41■■□□□ 1.34
TOM1-214ENST00000487670 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
TOM1-214ENST00000487670 EDC4Q6P2E9 1401 aaKnown RBP23.4■■□□□ 1.34
TOM1-214ENST00000487670 MAP2P11137 1827 aaKnown RBP23.4■■□□□ 1.34
TOM1-214ENST00000487670 IP6K1Q92551 441 aa23.39■■□□□ 1.33
TOM1-214ENST00000487670 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.33
TOM1-214ENST00000487670 PCNTO95613 3336 aa23.39■■□□□ 1.33
TOM1-214ENST00000487670 CICQ96RK0 1608 aaPredicted RBP23.38■■□□□ 1.33
TOM1-214ENST00000487670 WDR90Q96KV7 1748 aa23.38■■□□□ 1.33
TOM1-214ENST00000487670 KIF3CO14782 793 aa23.37■■□□□ 1.33
TOM1-214ENST00000487670 KIF13BQ9NQT8 1826 aa23.37■■□□□ 1.33
TOM1-214ENST00000487670 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
TOM1-214ENST00000487670 USP47Q96K76 1375 aa23.36■■□□□ 1.33
TOM1-214ENST00000487670 TMC1Q8TDI8 760 aa23.35■■□□□ 1.33
TOM1-214ENST00000487670 CD2APQ9Y5K6 639 aa23.35■■□□□ 1.33
TOM1-214ENST00000487670 MAP3K19Q56UN5 1328 aa23.34■■□□□ 1.33
TOM1-214ENST00000487670 IGSF1Q8N6C5 1336 aa23.34■■□□□ 1.33
TOM1-214ENST00000487670 BRCA1P38398 1863 aaKnown RBP23.34■■□□□ 1.33
TOM1-214ENST00000487670 USHBP1Q8N6Y0 703 aa23.34■■□□□ 1.33
TOM1-214ENST00000487670 ZCRB1Q8TBF4 217 aaKnown RBP23.34■■□□□ 1.33
TOM1-214ENST00000487670 HOXC9P31274 260 aa23.33■■□□□ 1.33
TOM1-214ENST00000487670 PKD1L3Q7Z443 1732 aa23.31■■□□□ 1.32
TOM1-214ENST00000487670 PALLDQ8WX93 1383 aa23.29■■□□□ 1.32
TOM1-214ENST00000487670 HDGFL2Q7Z4V5 671 aaPredicted RBP23.29■■□□□ 1.32
TOM1-214ENST00000487670 KIF20BQ96Q89 1820 aa23.27■■□□□ 1.32
TOM1-214ENST00000487670 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.32
TOM1-214ENST00000487670 NBPF4Q96M43 638 aa23.27■■□□□ 1.32
TOM1-214ENST00000487670 PHF14O94880 888 aa23.26■■□□□ 1.31
TOM1-214ENST00000487670 DNAJC5GQ8N7S2 189 aa23.26■■□□□ 1.31
TOM1-214ENST00000487670 AMPHP49418 695 aa23.23■■□□□ 1.31
TOM1-214ENST00000487670 RRS1Q15050 365 aaKnown RBP23.23■■□□□ 1.31
TOM1-214ENST00000487670 PXDNLA1KZ92 1463 aa23.23■■□□□ 1.31
TOM1-214ENST00000487670 HTRA3P83110 453 aa23.22■■□□□ 1.31
TOM1-214ENST00000487670 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
TOM1-214ENST00000487670 ARFGEF1Q9Y6D6 1849 aa23.22■■□□□ 1.31
TOM1-214ENST00000487670 MPRIPQ6WCQ1 1025 aa23.21■■□□□ 1.31
TOM1-214ENST00000487670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.19■■□□□ 1.3
TOM1-214ENST00000487670 APLP1P51693 650 aa23.19■■□□□ 1.3
TOM1-214ENST00000487670 AK7Q96M32 723 aa23.19■■□□□ 1.3
TOM1-214ENST00000487670 TERF2IPQ9NYB0 399 aa23.19■■□□□ 1.3
TOM1-214ENST00000487670 SBF1O95248 1867 aa23.19■■□□□ 1.3
TOM1-214ENST00000487670 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
TOM1-214ENST00000487670 CYP27B1O15528 508 aa23.18■■□□□ 1.3
TOM1-214ENST00000487670 LINC00116Q8NCU8 138 aa23.18■■□□□ 1.3
TOM1-214ENST00000487670 COG3Q96JB2 828 aa23.18■■□□□ 1.3
TOM1-214ENST00000487670 NMRK2Q9NPI5 230 aa23.18■■□□□ 1.3
TOM1-214ENST00000487670 RTL1A6NKG5 1358 aa23.17■■□□□ 1.3
TOM1-214ENST00000487670 FLAD1Q8NFF5 587 aa23.17■■□□□ 1.3
TOM1-214ENST00000487670 COL5A3P25940 1745 aaPredicted RBP23.16■■□□□ 1.3
TOM1-214ENST00000487670 COL13A1Q5TAT6 717 aaPredicted RBP23.16■■□□□ 1.3
TOM1-214ENST00000487670 CARD11Q9BXL7 1154 aa23.15■■□□□ 1.3
TOM1-214ENST00000487670 MYH14Q7Z406 1995 aaKnown RBP23.14■■□□□ 1.3
TOM1-214ENST00000487670 PCDH11XQ9BZA7 1347 aa23.14■■□□□ 1.3
TOM1-214ENST00000487670 PCDH11YQ9BZA8 1340 aa23.14■■□□□ 1.3
TOM1-214ENST00000487670 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.29
TOM1-214ENST00000487670 CAPN15O75808 1086 aa23.13■■□□□ 1.29
TOM1-214ENST00000487670 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
TOM1-214ENST00000487670 PIGBQ92521 554 aa23.13■■□□□ 1.29
TOM1-214ENST00000487670 ANKRD26Q9UPS8 1709 aa23.12■■□□□ 1.29
TOM1-214ENST00000487670 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
TOM1-214ENST00000487670 TOMM70O94826 608 aa23.11■■□□□ 1.29
TOM1-214ENST00000487670 ITPK1Q13572 414 aa23.11■■□□□ 1.29
TOM1-214ENST00000487670 HSP90AB2PQ58FF8 381 aa23.11■■□□□ 1.29
TOM1-214ENST00000487670 GGNBP2Q9H3C7 697 aa23.11■■□□□ 1.29
TOM1-214ENST00000487670 C10orf71Q711Q0 1435 aa23.09■■□□□ 1.29
TOM1-214ENST00000487670 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
TOM1-214ENST00000487670 CCDC88AQ3V6T2 1871 aa23.09■■□□□ 1.29
TOM1-214ENST00000487670 SSFA2P28290 1259 aa23.09■■□□□ 1.29
TOM1-214ENST00000487670 TNRC6CQ9HCJ0 1690 aaKnown RBP23.09■■□□□ 1.29
TOM1-214ENST00000487670 KCPQ6ZWJ8 1503 aa23.08■■□□□ 1.29
TOM1-214ENST00000487670 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
TOM1-214ENST00000487670 MMP10P09238 476 aa23.08■■□□□ 1.29
TOM1-214ENST00000487670 TESK2Q96S53 571 aa23.08■■□□□ 1.29
TOM1-214ENST00000487670 BCS1LQ9Y276 419 aa23.08■■□□□ 1.29
TOM1-214ENST00000487670 NSD3Q9BZ95 1437 aa23.08■■□□□ 1.28
TOM1-214ENST00000487670 GNPATO15228 680 aa23.07■■□□□ 1.28
TOM1-214ENST00000487670 INSRP06213 1382 aa23.06■■□□□ 1.28
TOM1-214ENST00000487670 LOC102724428A0A0B4J2F2 783 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms