RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CC2D1BQ5T0F9 858 aaKnown RBP14.56□□□□□ -0.08
TOP3B-216ENST00000487485 C1QTNF8P60827 252 aa14.55□□□□□ -0.08
TOP3B-216ENST00000487485 CNGB1Q14028 1251 aaPredicted RBP14.55□□□□□ -0.08
TOP3B-216ENST00000487485 ACSBG1Q96GR2 724 aa14.55□□□□□ -0.08
TOP3B-216ENST00000487485 ARXQ96QS3 562 aa14.55□□□□□ -0.08
TOP3B-216ENST00000487485 WNK3Q9BYP7 1800 aa14.55□□□□□ -0.08
TOP3B-216ENST00000487485 MORC1Q86VD1 984 aa14.54□□□□□ -0.08
TOP3B-216ENST00000487485 NPC1L1Q9UHC9 1359 aa14.54□□□□□ -0.08
TOP3B-216ENST00000487485 TNNT2P45379 298 aaPredicted RBP14.53□□□□□ -0.08
TOP3B-216ENST00000487485 RRS1Q15050 365 aaKnown RBP14.52□□□□□ -0.09
TOP3B-216ENST00000487485 ZNF827Q17R98 1081 aa14.51□□□□□ -0.09
TOP3B-216ENST00000487485 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
TOP3B-216ENST00000487485 GPR162Q16538 588 aa14.5□□□□□ -0.09
TOP3B-216ENST00000487485 LRRC4BQ9NT99 713 aa14.5□□□□□ -0.09
TOP3B-216ENST00000487485 AMPHP49418 695 aa14.49□□□□□ -0.09
TOP3B-216ENST00000487485 NLRP2Q9NX02 1062 aa14.49□□□□□ -0.09
TOP3B-216ENST00000487485 TNS2Q63HR2 1409 aa14.49□□□□□ -0.09
TOP3B-216ENST00000487485 MAP3K5Q99683 1374 aa14.48□□□□□ -0.09
TOP3B-216ENST00000487485 GOLGB1Q14789 3259 aaKnown RBP14.48□□□□□ -0.09
TOP3B-216ENST00000487485 IP6K1Q92551 441 aa14.48□□□□□ -0.09
TOP3B-216ENST00000487485 POLKQ9UBT6 870 aa14.48□□□□□ -0.09
TOP3B-216ENST00000487485 EMILIN1Q9Y6C2 1016 aa14.48□□□□□ -0.09
TOP3B-216ENST00000487485 CEP350Q5VT06 3117 aa14.48□□□□□ -0.09
TOP3B-216ENST00000487485 PPM1GO15355 546 aaPredicted RBP14.47□□□□□ -0.09
TOP3B-216ENST00000487485 HOXC9P31274 260 aa14.47□□□□□ -0.09
TOP3B-216ENST00000487485 ABCC6O95255 1503 aa14.46□□□□□ -0.09
TOP3B-216ENST00000487485 IL2RBP14784 551 aa14.46□□□□□ -0.09
TOP3B-216ENST00000487485 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
TOP3B-216ENST00000487485 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
TOP3B-216ENST00000487485 NHSQ6T4R5 1651 aa14.46□□□□□ -0.1
TOP3B-216ENST00000487485 ERBB3P21860 1342 aa14.45□□□□□ -0.1
TOP3B-216ENST00000487485 PAPPAQ13219 1627 aa14.45□□□□□ -0.1
TOP3B-216ENST00000487485 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
TOP3B-216ENST00000487485 BTAF1O14981 1849 aa14.45□□□□□ -0.1
TOP3B-216ENST00000487485 RTL1A6NKG5 1358 aa14.45□□□□□ -0.1
TOP3B-216ENST00000487485 KIF24Q5T7B8 1368 aa14.45□□□□□ -0.1
TOP3B-216ENST00000487485 KCNQ4P56696 695 aa14.44□□□□□ -0.1
TOP3B-216ENST00000487485 HSP90AB2PQ58FF8 381 aa14.44□□□□□ -0.1
TOP3B-216ENST00000487485 FLT4P35916 1363 aa14.44□□□□□ -0.1
TOP3B-216ENST00000487485 GIGYF1O75420 1035 aaPredicted RBP14.43□□□□□ -0.1
TOP3B-216ENST00000487485 MTHFSP49914 203 aa14.43□□□□□ -0.1
TOP3B-216ENST00000487485 RALBP1Q15311 655 aa14.43□□□□□ -0.1
TOP3B-216ENST00000487485 ANKRD24Q8TF21 1146 aa14.43□□□□□ -0.1
TOP3B-216ENST00000487485 SLC16A10Q8TF71 515 aa14.43□□□□□ -0.1
TOP3B-216ENST00000487485 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
TOP3B-216ENST00000487485 PNPLA7Q6ZV29 1317 aa14.42□□□□□ -0.1
TOP3B-216ENST00000487485 RGPD2P0DJD1 1756 aa14.42□□□□□ -0.1
TOP3B-216ENST00000487485 SMG6Q86US8 1419 aaKnown RBP14.42□□□□□ -0.1
TOP3B-216ENST00000487485 POLD1P28340 1107 aa14.42□□□□□ -0.1
TOP3B-216ENST00000487485 PPP2R1AP30153 589 aa14.42□□□□□ -0.1
TOP3B-216ENST00000487485 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
TOP3B-216ENST00000487485 NLGN2Q8NFZ4 835 aa14.42□□□□□ -0.1
TOP3B-216ENST00000487485 INSRP06213 1382 aa14.42□□□□□ -0.1
TOP3B-216ENST00000487485 SLC27A3Q5K4L6 730 aa14.41□□□□□ -0.1
TOP3B-216ENST00000487485 DDX54Q8TDD1 881 aaKnown RBP14.41□□□□□ -0.1
TOP3B-216ENST00000487485 FAM208AQ9UK61 1670 aaKnown RBP14.4□□□□□ -0.1
TOP3B-216ENST00000487485 PRKRIP1Q9H875 184 aaPredicted RBP14.4□□□□□ -0.1
TOP3B-216ENST00000487485 TFCP2L1Q9NZI6 479 aa14.4□□□□□ -0.1
TOP3B-216ENST00000487485 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
TOP3B-216ENST00000487485 PRIM1P49642 420 aaKnown RBP14.38□□□□□ -0.11
TOP3B-216ENST00000487485 ANP32CO43423 234 aa14.37□□□□□ -0.11
TOP3B-216ENST00000487485 EIF4A2Q14240 407 aaKnown RBP14.37□□□□□ -0.11
TOP3B-216ENST00000487485 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
TOP3B-216ENST00000487485 MYBBP1AQ9BQG0 1328 aaKnown RBP14.37□□□□□ -0.11
TOP3B-216ENST00000487485 COL24A1Q17RW2 1714 aa14.36□□□□□ -0.11
TOP3B-216ENST00000487485 NBPF6Q5VWK0 638 aa14.36□□□□□ -0.11
TOP3B-216ENST00000487485 NBPF4Q96M43 638 aa14.36□□□□□ -0.11
TOP3B-216ENST00000487485 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
TOP3B-216ENST00000487485 GRIN3BO60391 1043 aa14.35□□□□□ -0.11
TOP3B-216ENST00000487485 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
TOP3B-216ENST00000487485 QSER1Q2KHR3 1735 aa14.35□□□□□ -0.11
TOP3B-216ENST00000487485 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
TOP3B-216ENST00000487485 TUBGCP6Q96RT7 1819 aa14.34□□□□□ -0.11
TOP3B-216ENST00000487485 MSH5O43196 834 aa14.34□□□□□ -0.11
TOP3B-216ENST00000487485 IL13P35225 146 aa14.34□□□□□ -0.11
TOP3B-216ENST00000487485 COL23A1Q86Y22 540 aaPredicted RBP14.34□□□□□ -0.11
TOP3B-216ENST00000487485 EYA1Q99502 592 aa14.34□□□□□ -0.11
TOP3B-216ENST00000487485 COL3A1P02461 1466 aaPredicted RBP14.33□□□□□ -0.12
TOP3B-216ENST00000487485 USHBP1Q8N6Y0 703 aa14.33□□□□□ -0.12
TOP3B-216ENST00000487485 CCNL1Q9UK58 526 aaPredicted RBP14.33□□□□□ -0.12
TOP3B-216ENST00000487485 DIEXFQ68CQ4 756 aaKnown RBP14.32□□□□□ -0.12
TOP3B-216ENST00000487485 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
TOP3B-216ENST00000487485 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
TOP3B-216ENST00000487485 NUDCQ9Y266 331 aa14.3□□□□□ -0.12
TOP3B-216ENST00000487485 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
TOP3B-216ENST00000487485 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
TOP3B-216ENST00000487485 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
TOP3B-216ENST00000487485 LY75O60449 1722 aa14.29□□□□□ -0.12
TOP3B-216ENST00000487485 NCAPD2Q15021 1401 aa14.28□□□□□ -0.12
TOP3B-216ENST00000487485 SULT6B1Q6IMI4 303 aa14.28□□□□□ -0.12
TOP3B-216ENST00000487485 RAPGEF4Q8WZA2 1011 aa14.28□□□□□ -0.12
TOP3B-216ENST00000487485 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
TOP3B-216ENST00000487485 AEBP1Q8IUX7 1158 aa14.27□□□□□ -0.13
TOP3B-216ENST00000487485 GPBP1L1Q9HC44 474 aaPredicted RBP14.27□□□□□ -0.13
TOP3B-216ENST00000487485 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.13
TOP3B-216ENST00000487485 HMOX1P09601 288 aa14.26□□□□□ -0.13
TOP3B-216ENST00000487485 ZNF526Q8TF50 670 aaPredicted RBP14.26□□□□□ -0.13
TOP3B-216ENST00000487485 CD2APQ9Y5K6 639 aa14.26□□□□□ -0.13
TOP3B-216ENST00000487485 MEGF6O75095 1541 aa14.25□□□□□ -0.13
TOP3B-216ENST00000487485 U2AF1L5P0DN76 240 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms