RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 DUSP27Q5VZP5 1158 aa18.93■□□□□ 0.62
GCA-210ENST00000487445 ZNF530Q6P9A1 599 aaPredicted RBP18.93■□□□□ 0.62
GCA-210ENST00000487445 GNAT3A8MTJ3 354 aa18.93■□□□□ 0.62
GCA-210ENST00000487445 MEX3CQ5U5Q3 659 aaKnown RBP18.93■□□□□ 0.62
GCA-210ENST00000487445 CRB1P82279 1406 aa18.91■□□□□ 0.62
GCA-210ENST00000487445 CALD1Q05682 793 aaKnown RBP18.9■□□□□ 0.62
GCA-210ENST00000487445 C1orf141Q5JVX7 400 aa18.9■□□□□ 0.62
GCA-210ENST00000487445 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
GCA-210ENST00000487445 CCDC9Q9Y3X0 531 aaKnown RBP18.9■□□□□ 0.62
GCA-210ENST00000487445 COL14A1Q05707 1796 aaKnown RBP18.9■□□□□ 0.62
GCA-210ENST00000487445 IL2RBP14784 551 aa18.9■□□□□ 0.62
GCA-210ENST00000487445 TRMT2AQ8IZ69 625 aaKnown RBP18.9■□□□□ 0.62
GCA-210ENST00000487445 SPG7Q9UQ90 795 aa18.9■□□□□ 0.62
GCA-210ENST00000487445 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.62
GCA-210ENST00000487445 TSR2Q969E8 191 aaKnown RBP18.89■□□□□ 0.61
GCA-210ENST00000487445 MAP3K5Q99683 1374 aa18.89■□□□□ 0.61
GCA-210ENST00000487445 MEGF6O75095 1541 aa18.89■□□□□ 0.61
GCA-210ENST00000487445 IL16Q14005 1332 aa18.88■□□□□ 0.61
GCA-210ENST00000487445 AKAP4Q5JQC9 854 aa18.88■□□□□ 0.61
GCA-210ENST00000487445 HTATSF1O43719 755 aaKnown RBP18.88■□□□□ 0.61
GCA-210ENST00000487445 LRP6O75581 1613 aa18.87■□□□□ 0.61
GCA-210ENST00000487445 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
GCA-210ENST00000487445 UNC5CLQ8IV45 518 aa18.87■□□□□ 0.61
GCA-210ENST00000487445 IL17REQ8NFR9 667 aa18.86■□□□□ 0.61
GCA-210ENST00000487445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
GCA-210ENST00000487445 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
GCA-210ENST00000487445 GNAI1P63096 354 aa18.86■□□□□ 0.61
GCA-210ENST00000487445 ZCRB1Q8TBF4 217 aaKnown RBP18.86■□□□□ 0.61
GCA-210ENST00000487445 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
GCA-210ENST00000487445 SLIT2O94813 1529 aa18.85■□□□□ 0.61
GCA-210ENST00000487445 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
GCA-210ENST00000487445 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
GCA-210ENST00000487445 LGR6Q9HBX8 967 aa18.85■□□□□ 0.61
GCA-210ENST00000487445 USP21Q9UK80 565 aa18.85■□□□□ 0.61
GCA-210ENST00000487445 IFNL2Q8IZJ0 200 aa18.84■□□□□ 0.61
GCA-210ENST00000487445 CFAP44Q96MT7 982 aa18.84■□□□□ 0.61
GCA-210ENST00000487445 SPATA31A1Q5TZJ5 1347 aa18.84■□□□□ 0.61
GCA-210ENST00000487445 FAM208AQ9UK61 1670 aaKnown RBP18.84■□□□□ 0.61
GCA-210ENST00000487445 PHKG2P15735 406 aa18.84■□□□□ 0.61
GCA-210ENST00000487445 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
GCA-210ENST00000487445 RCAN3Q9UKA8 241 aa18.84■□□□□ 0.61
GCA-210ENST00000487445 MBIPQ9NS73 344 aa18.83■□□□□ 0.6
GCA-210ENST00000487445 MIS18AQ9NYP9 233 aa18.83■□□□□ 0.6
GCA-210ENST00000487445 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.6
GCA-210ENST00000487445 CYP27B1O15528 508 aa18.82■□□□□ 0.6
GCA-210ENST00000487445 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
GCA-210ENST00000487445 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
GCA-210ENST00000487445 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
GCA-210ENST00000487445 RNMTO43148 476 aaKnown RBP18.81■□□□□ 0.6
GCA-210ENST00000487445 EXOSC9Q06265 439 aaKnown RBP18.81■□□□□ 0.6
GCA-210ENST00000487445 BCL9LQ86UU0 1499 aa18.81■□□□□ 0.6
GCA-210ENST00000487445 TEFQ10587 303 aa18.81■□□□□ 0.6
GCA-210ENST00000487445 FBXO41Q8TF61 875 aa18.81■□□□□ 0.6
GCA-210ENST00000487445 AFF2P51816 1311 aa18.8■□□□□ 0.6
GCA-210ENST00000487445 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
GCA-210ENST00000487445 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
GCA-210ENST00000487445 VPS72Q15906 364 aa18.8■□□□□ 0.6
GCA-210ENST00000487445 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
GCA-210ENST00000487445 THRAP3Q9Y2W1 955 aaKnown RBP18.8■□□□□ 0.6
GCA-210ENST00000487445 PLCH1Q4KWH8 1693 aa18.79■□□□□ 0.6
GCA-210ENST00000487445 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
GCA-210ENST00000487445 CHL1O00533 1208 aa18.79■□□□□ 0.6
GCA-210ENST00000487445 EXOC5O00471 708 aa18.79■□□□□ 0.6
GCA-210ENST00000487445 TAF7Q15545 349 aaPredicted RBP18.79■□□□□ 0.6
GCA-210ENST00000487445 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
GCA-210ENST00000487445 ELL2O00472 640 aaPredicted RBP18.77■□□□□ 0.6
GCA-210ENST00000487445 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
GCA-210ENST00000487445 DCAF5Q96JK2 942 aa18.77■□□□□ 0.6
GCA-210ENST00000487445 FAM98CQ17RN3 349 aaKnown RBP18.77■□□□□ 0.59
GCA-210ENST00000487445 CDCA7Q9BWT1 371 aaPredicted RBP18.77■□□□□ 0.59
GCA-210ENST00000487445 A0A0G2JS52 829 aa18.76■□□□□ 0.59
GCA-210ENST00000487445 MYT1Q01538 1121 aa18.76■□□□□ 0.59
GCA-210ENST00000487445 DLG5Q8TDM6 1919 aa18.75■□□□□ 0.59
GCA-210ENST00000487445 DISP2A7MBM2 1401 aa18.75■□□□□ 0.59
GCA-210ENST00000487445 DDB1Q16531 1140 aa18.75■□□□□ 0.59
GCA-210ENST00000487445 BARGINQ6ZT62 677 aa18.75■□□□□ 0.59
GCA-210ENST00000487445 BTBD11A6QL63 1104 aa18.74■□□□□ 0.59
GCA-210ENST00000487445 KRT24Q2M2I5 525 aa18.74■□□□□ 0.59
GCA-210ENST00000487445 TSPYL6Q8N831 410 aa18.74■□□□□ 0.59
GCA-210ENST00000487445 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
GCA-210ENST00000487445 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
GCA-210ENST00000487445 NRAPQ86VF7 1730 aa18.73■□□□□ 0.59
GCA-210ENST00000487445 NEFLP07196 543 aa18.73■□□□□ 0.59
GCA-210ENST00000487445 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
GCA-210ENST00000487445 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
GCA-210ENST00000487445 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
GCA-210ENST00000487445 BCAR3O75815 825 aa18.72■□□□□ 0.59
GCA-210ENST00000487445 CABP4P57796 275 aa18.72■□□□□ 0.59
GCA-210ENST00000487445 IRX6P78412 446 aaPredicted RBP18.72■□□□□ 0.59
GCA-210ENST00000487445 BCL2L13Q9BXK5 485 aa18.72■□□□□ 0.59
GCA-210ENST00000487445 SLC52A2Q9HAB3 445 aa18.72■□□□□ 0.59
GCA-210ENST00000487445 TRPC5Q9UL62 973 aaPredicted RBP18.72■□□□□ 0.59
GCA-210ENST00000487445 TWISTNBQ3B726 338 aaPredicted RBP18.72■□□□□ 0.59
GCA-210ENST00000487445 GJD4Q96KN9 370 aaPredicted RBP18.72■□□□□ 0.59
GCA-210ENST00000487445 BABAM1Q9NWV8 329 aa18.72■□□□□ 0.59
GCA-210ENST00000487445 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
GCA-210ENST00000487445 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
GCA-210ENST00000487445 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
GCA-210ENST00000487445 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
GCA-210ENST00000487445 PARP4Q9UKK3 1724 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms