RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 SHANK3Q9BYB0 1731 aa11.97□□□□□ -0.49
HOXA9-204ENST00000487384 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
HOXA9-204ENST00000487384 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
HOXA9-204ENST00000487384 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
HOXA9-204ENST00000487384 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
HOXA9-204ENST00000487384 LY75O60449 1722 aa11.97□□□□□ -0.49
HOXA9-204ENST00000487384 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.49
HOXA9-204ENST00000487384 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
HOXA9-204ENST00000487384 SLC12A5Q9H2X9 1139 aa11.96□□□□□ -0.49
HOXA9-204ENST00000487384 FAM208AQ9UK61 1670 aaKnown RBP11.95□□□□□ -0.5
HOXA9-204ENST00000487384 HDGFL2Q7Z4V5 671 aaPredicted RBP11.95□□□□□ -0.5
HOXA9-204ENST00000487384 YBX3P16989 372 aaKnown RBP eCLIP11.94□□□□□ -0.5
HOXA9-204ENST00000487384 FBLN1P23142 703 aa11.93□□□□□ -0.5
HOXA9-204ENST00000487384 MSL1Q68DK7 614 aa11.93□□□□□ -0.5
HOXA9-204ENST00000487384 IP6K1Q92551 441 aa11.93□□□□□ -0.5
HOXA9-204ENST00000487384 EDC4Q6P2E9 1401 aaKnown RBP11.93□□□□□ -0.5
HOXA9-204ENST00000487384 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
HOXA9-204ENST00000487384 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
HOXA9-204ENST00000487384 NSD2O96028 1365 aa11.92□□□□□ -0.5
HOXA9-204ENST00000487384 ANKRD36BQ8N2N9 1353 aa11.92□□□□□ -0.5
HOXA9-204ENST00000487384 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
HOXA9-204ENST00000487384 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
HOXA9-204ENST00000487384 CARD11Q9BXL7 1154 aa11.91□□□□□ -0.5
HOXA9-204ENST00000487384 TERF2IPQ9NYB0 399 aa11.91□□□□□ -0.5
HOXA9-204ENST00000487384 GRIN3BO60391 1043 aa11.9□□□□□ -0.5
HOXA9-204ENST00000487384 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
HOXA9-204ENST00000487384 TAF1LQ8IZX4 1826 aa11.9□□□□□ -0.5
HOXA9-204ENST00000487384 C5P01031 1676 aa11.9□□□□□ -0.5
HOXA9-204ENST00000487384 MEGF6O75095 1541 aa11.9□□□□□ -0.5
HOXA9-204ENST00000487384 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
HOXA9-204ENST00000487384 HOXC9P31274 260 aa11.89□□□□□ -0.51
HOXA9-204ENST00000487384 AMPHP49418 695 aa11.89□□□□□ -0.51
HOXA9-204ENST00000487384 USP47Q96K76 1375 aa11.89□□□□□ -0.51
HOXA9-204ENST00000487384 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
HOXA9-204ENST00000487384 USHBP1Q8N6Y0 703 aa11.88□□□□□ -0.51
HOXA9-204ENST00000487384 ZNF526Q8TF50 670 aaPredicted RBP11.88□□□□□ -0.51
HOXA9-204ENST00000487384 COG3Q96JB2 828 aa11.88□□□□□ -0.51
HOXA9-204ENST00000487384 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
HOXA9-204ENST00000487384 ITGB4P16144 1822 aa11.86□□□□□ -0.51
HOXA9-204ENST00000487384 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
HOXA9-204ENST00000487384 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
HOXA9-204ENST00000487384 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
HOXA9-204ENST00000487384 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
HOXA9-204ENST00000487384 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
HOXA9-204ENST00000487384 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
HOXA9-204ENST00000487384 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
HOXA9-204ENST00000487384 RAPGEF4Q8WZA2 1011 aa11.84□□□□□ -0.51
HOXA9-204ENST00000487384 UBR3Q6ZT12 1888 aa11.84□□□□□ -0.51
HOXA9-204ENST00000487384 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
HOXA9-204ENST00000487384 CD2APQ9Y5K6 639 aa11.83□□□□□ -0.52
HOXA9-204ENST00000487384 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
HOXA9-204ENST00000487384 PALLDQ8WX93 1383 aa11.82□□□□□ -0.52
HOXA9-204ENST00000487384 ZBTB22O15209 634 aa11.82□□□□□ -0.52
HOXA9-204ENST00000487384 PHF14O94880 888 aa11.82□□□□□ -0.52
HOXA9-204ENST00000487384 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
HOXA9-204ENST00000487384 GGNBP2Q9H3C7 697 aa11.82□□□□□ -0.52
HOXA9-204ENST00000487384 HSPA6P17066 643 aa11.81□□□□□ -0.52
HOXA9-204ENST00000487384 TATP17735 454 aaPredicted RBP11.81□□□□□ -0.52
HOXA9-204ENST00000487384 AK7Q96M32 723 aa11.81□□□□□ -0.52
HOXA9-204ENST00000487384 PUS7Q96PZ0 661 aaKnown RBP11.81□□□□□ -0.52
HOXA9-204ENST00000487384 CGNL1Q0VF96 1302 aa11.81□□□□□ -0.52
HOXA9-204ENST00000487384 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
HOXA9-204ENST00000487384 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 ADCY9O60503 1353 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
HOXA9-204ENST00000487384 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 FLAD1Q8NFF5 587 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 TESK2Q96S53 571 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 KIF20BQ96Q89 1820 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
HOXA9-204ENST00000487384 PCNTO95613 3336 aa11.79□□□□□ -0.52
HOXA9-204ENST00000487384 FYB1O15117 783 aa11.79□□□□□ -0.52
HOXA9-204ENST00000487384 CYP27B1O15528 508 aa11.79□□□□□ -0.52
HOXA9-204ENST00000487384 N4BP2Q86UW6 1770 aaPredicted RBP11.78□□□□□ -0.52
HOXA9-204ENST00000487384 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
HOXA9-204ENST00000487384 MAP2P11137 1827 aaKnown RBP11.78□□□□□ -0.52
HOXA9-204ENST00000487384 TONSLQ96HA7 1378 aa11.78□□□□□ -0.52
HOXA9-204ENST00000487384 PKD1L3Q7Z443 1732 aa11.77□□□□□ -0.53
HOXA9-204ENST00000487384 LINC00116Q8NCU8 138 aa11.76□□□□□ -0.53
HOXA9-204ENST00000487384 PIGBQ92521 554 aa11.76□□□□□ -0.53
HOXA9-204ENST00000487384 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
HOXA9-204ENST00000487384 INSRP06213 1382 aa11.76□□□□□ -0.53
HOXA9-204ENST00000487384 KIF3CO14782 793 aa11.75□□□□□ -0.53
HOXA9-204ENST00000487384 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
HOXA9-204ENST00000487384 FLT4P35916 1363 aa11.75□□□□□ -0.53
HOXA9-204ENST00000487384 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
HOXA9-204ENST00000487384 GNPATO15228 680 aa11.74□□□□□ -0.53
HOXA9-204ENST00000487384 PPM1GO15355 546 aaPredicted RBP11.74□□□□□ -0.53
HOXA9-204ENST00000487384 SIK1P57059 783 aa11.74□□□□□ -0.53
HOXA9-204ENST00000487384 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
HOXA9-204ENST00000487384 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
HOXA9-204ENST00000487384 SSFA2P28290 1259 aa11.73□□□□□ -0.53
HOXA9-204ENST00000487384 ITPK1Q13572 414 aa11.73□□□□□ -0.53
HOXA9-204ENST00000487384 NSD3Q9BZ95 1437 aa11.73□□□□□ -0.53
HOXA9-204ENST00000487384 KIAA1551Q9HCM1 1747 aa11.73□□□□□ -0.53
HOXA9-204ENST00000487384 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
HOXA9-204ENST00000487384 MMP10P09238 476 aa11.72□□□□□ -0.53
HOXA9-204ENST00000487384 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms