RNA–Protein interactions for RNA: ENST00000487358.5

SEMA4A-215, Transcript of semaphorin 4A, humanhuman

TSL 5

Gene SEMA4A, Length 1,478 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-215ENST00000487358 RTL1A6NKG5 1358 aa16.86■□□□□ 0.29
SEMA4A-215ENST00000487358 USP47Q96K76 1375 aa16.86■□□□□ 0.29
SEMA4A-215ENST00000487358 CHD4Q14839 1912 aa16.86■□□□□ 0.29
SEMA4A-215ENST00000487358 QSER1Q2KHR3 1735 aa16.86■□□□□ 0.29
SEMA4A-215ENST00000487358 SHANK3Q9BYB0 1731 aa16.86■□□□□ 0.29
SEMA4A-215ENST00000487358 NBPF6Q5VWK0 638 aa16.86■□□□□ 0.29
SEMA4A-215ENST00000487358 NBPF4Q96M43 638 aa16.86■□□□□ 0.29
SEMA4A-215ENST00000487358 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
SEMA4A-215ENST00000487358 CDCA8Q53HL2 280 aa16.85■□□□□ 0.29
SEMA4A-215ENST00000487358 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
SEMA4A-215ENST00000487358 MEGF6O75095 1541 aa16.85■□□□□ 0.29
SEMA4A-215ENST00000487358 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
SEMA4A-215ENST00000487358 LY75O60449 1722 aa16.84■□□□□ 0.29
SEMA4A-215ENST00000487358 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 NSD2O96028 1365 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 MAP3K5Q99683 1374 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 KCNQ4P56696 695 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 TFCP2L1Q9NZI6 479 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 PNPLA7Q6ZV29 1317 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
SEMA4A-215ENST00000487358 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
SEMA4A-215ENST00000487358 HSP90AB2PQ58FF8 381 aa16.81■□□□□ 0.28
SEMA4A-215ENST00000487358 INSRP06213 1382 aa16.81■□□□□ 0.28
SEMA4A-215ENST00000487358 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
SEMA4A-215ENST00000487358 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
SEMA4A-215ENST00000487358 COL24A1Q17RW2 1714 aa16.8■□□□□ 0.28
SEMA4A-215ENST00000487358 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
SEMA4A-215ENST00000487358 POLD1P28340 1107 aa16.8■□□□□ 0.28
SEMA4A-215ENST00000487358 CCNL1Q9UK58 526 aaPredicted RBP16.8■□□□□ 0.28
SEMA4A-215ENST00000487358 FLT4P35916 1363 aa16.79■□□□□ 0.28
SEMA4A-215ENST00000487358 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
SEMA4A-215ENST00000487358 ZNF784Q8NCA9 323 aaPredicted RBP16.77■□□□□ 0.28
SEMA4A-215ENST00000487358 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
SEMA4A-215ENST00000487358 PCDH11XQ9BZA7 1347 aa16.76■□□□□ 0.27
SEMA4A-215ENST00000487358 PCDH11YQ9BZA8 1340 aa16.76■□□□□ 0.27
SEMA4A-215ENST00000487358 MAP2P11137 1827 aaKnown RBP16.76■□□□□ 0.27
SEMA4A-215ENST00000487358 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
SEMA4A-215ENST00000487358 NSD3Q9BZ95 1437 aa16.74■□□□□ 0.27
SEMA4A-215ENST00000487358 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
SEMA4A-215ENST00000487358 GPR162Q16538 588 aa16.74■□□□□ 0.27
SEMA4A-215ENST00000487358 ITGB4P16144 1822 aa16.74■□□□□ 0.27
SEMA4A-215ENST00000487358 CYP27B1O15528 508 aa16.73■□□□□ 0.27
SEMA4A-215ENST00000487358 KLHL34Q8N239 644 aa16.73■□□□□ 0.27
SEMA4A-215ENST00000487358 TAF1LQ8IZX4 1826 aa16.73■□□□□ 0.27
SEMA4A-215ENST00000487358 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
SEMA4A-215ENST00000487358 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
SEMA4A-215ENST00000487358 MSH5O43196 834 aa16.72■□□□□ 0.27
SEMA4A-215ENST00000487358 C5P01031 1676 aa16.71■□□□□ 0.27
SEMA4A-215ENST00000487358 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
SEMA4A-215ENST00000487358 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
SEMA4A-215ENST00000487358 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
SEMA4A-215ENST00000487358 PALLDQ8WX93 1383 aa16.7■□□□□ 0.26
SEMA4A-215ENST00000487358 ANKRD26Q9UPS8 1709 aa16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 NKX1-1Q15270 411 aaPredicted RBP16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 NLGN2Q8NFZ4 835 aa16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 SMARCC1Q92922 1105 aaPredicted RBP16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 NCAPD2Q15021 1401 aa16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 TOGARAM1Q9Y4F4 1720 aa16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
SEMA4A-215ENST00000487358 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
SEMA4A-215ENST00000487358 PELP1Q8IZL8 1130 aaKnown RBP16.67■□□□□ 0.26
SEMA4A-215ENST00000487358 PIGBQ92521 554 aa16.67■□□□□ 0.26
SEMA4A-215ENST00000487358 EYA1Q99502 592 aa16.67■□□□□ 0.26
SEMA4A-215ENST00000487358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEMA4A-215ENST00000487358 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
SEMA4A-215ENST00000487358 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
SEMA4A-215ENST00000487358 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
SEMA4A-215ENST00000487358 C4BP0C0L5 1744 aa16.64■□□□□ 0.25
SEMA4A-215ENST00000487358 GRIN3BO60391 1043 aa16.64■□□□□ 0.25
SEMA4A-215ENST00000487358 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
SEMA4A-215ENST00000487358 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
SEMA4A-215ENST00000487358 IFNL2Q8IZJ0 200 aa16.63■□□□□ 0.25
SEMA4A-215ENST00000487358 AK7Q96M32 723 aa16.63■□□□□ 0.25
SEMA4A-215ENST00000487358 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
SEMA4A-215ENST00000487358 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEMA4A-215ENST00000487358 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
SEMA4A-215ENST00000487358 LOC102724428A0A0B4J2F2 783 aa16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 PHKG2P15735 406 aa16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 TNNT2P45379 298 aaPredicted RBP16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 SIK1P57059 783 aa16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 AMIGO3Q86WK7 504 aa16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
SEMA4A-215ENST00000487358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
SEMA4A-215ENST00000487358 SSFA2P28290 1259 aa16.6■□□□□ 0.25
SEMA4A-215ENST00000487358 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
SEMA4A-215ENST00000487358 PHF14O94880 888 aa16.59■□□□□ 0.25
SEMA4A-215ENST00000487358 LINC00116Q8NCU8 138 aa16.59■□□□□ 0.25
SEMA4A-215ENST00000487358 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.25
SEMA4A-215ENST00000487358 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
SEMA4A-215ENST00000487358 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
SEMA4A-215ENST00000487358 PANK3Q9H999 370 aa16.58■□□□□ 0.24
SEMA4A-215ENST00000487358 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
SEMA4A-215ENST00000487358 ATG3Q9NT62 314 aa16.57■□□□□ 0.24
SEMA4A-215ENST00000487358 ITPK1Q13572 414 aa16.56■□□□□ 0.24
SEMA4A-215ENST00000487358 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms