RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
RNF220-215ENST00000487332 DOT1LQ8TEK3 1739 aa14.04□□□□□ -0.16
RNF220-215ENST00000487332 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
RNF220-215ENST00000487332 MORC1Q86VD1 984 aa14.03□□□□□ -0.16
RNF220-215ENST00000487332 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
RNF220-215ENST00000487332 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
RNF220-215ENST00000487332 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
RNF220-215ENST00000487332 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
RNF220-215ENST00000487332 PAPPAQ13219 1627 aa14.02□□□□□ -0.16
RNF220-215ENST00000487332 BTAF1O14981 1849 aa14.01□□□□□ -0.17
RNF220-215ENST00000487332 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
RNF220-215ENST00000487332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
RNF220-215ENST00000487332 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
RNF220-215ENST00000487332 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
RNF220-215ENST00000487332 EYA1Q99502 592 aa14□□□□□ -0.17
RNF220-215ENST00000487332 KDRP35968 1356 aa13.99□□□□□ -0.17
RNF220-215ENST00000487332 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
RNF220-215ENST00000487332 NBPF14Q5TI25 921 aa13.98□□□□□ -0.17
RNF220-215ENST00000487332 PTF1AQ7RTS3 328 aa13.98□□□□□ -0.17
RNF220-215ENST00000487332 DDX54Q8TDD1 881 aaKnown RBP13.98□□□□□ -0.17
RNF220-215ENST00000487332 LY75O60449 1722 aa13.98□□□□□ -0.17
RNF220-215ENST00000487332 TOGARAM1Q9Y4F4 1720 aa13.98□□□□□ -0.17
RNF220-215ENST00000487332 KCNQ2O43526 872 aa13.97□□□□□ -0.17
RNF220-215ENST00000487332 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
RNF220-215ENST00000487332 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
RNF220-215ENST00000487332 TXNRD1Q16881 649 aa13.96□□□□□ -0.17
RNF220-215ENST00000487332 ACSBG1Q96GR2 724 aa13.96□□□□□ -0.17
RNF220-215ENST00000487332 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
RNF220-215ENST00000487332 CASZ1Q86V15 1759 aa13.96□□□□□ -0.18
RNF220-215ENST00000487332 PROM2Q8N271 834 aa13.95□□□□□ -0.18
RNF220-215ENST00000487332 CYP27B1O15528 508 aa13.94□□□□□ -0.18
RNF220-215ENST00000487332 IL13P35225 146 aa13.94□□□□□ -0.18
RNF220-215ENST00000487332 R3HDM1Q15032 1099 aaKnown RBP13.94□□□□□ -0.18
RNF220-215ENST00000487332 QSER1Q2KHR3 1735 aa13.94□□□□□ -0.18
RNF220-215ENST00000487332 SLC27A3Q5K4L6 730 aa13.94□□□□□ -0.18
RNF220-215ENST00000487332 PSDA5PKW4 1024 aaPredicted RBP13.92□□□□□ -0.18
RNF220-215ENST00000487332 HMGB2P26583 209 aaKnown RBP13.92□□□□□ -0.18
RNF220-215ENST00000487332 MTHFSP49914 203 aa13.92□□□□□ -0.18
RNF220-215ENST00000487332 AMOTQ4VCS5 1084 aa13.92□□□□□ -0.18
RNF220-215ENST00000487332 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
RNF220-215ENST00000487332 IFNL2Q8IZJ0 200 aa13.92□□□□□ -0.18
RNF220-215ENST00000487332 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
RNF220-215ENST00000487332 PHKG2P15735 406 aa13.91□□□□□ -0.18
RNF220-215ENST00000487332 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
RNF220-215ENST00000487332 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.18
RNF220-215ENST00000487332 ZNF831Q5JPB2 1677 aa13.89□□□□□ -0.19
RNF220-215ENST00000487332 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
RNF220-215ENST00000487332 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
RNF220-215ENST00000487332 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
RNF220-215ENST00000487332 STK32BQ9NY57 414 aa13.89□□□□□ -0.19
RNF220-215ENST00000487332 ITGB4P16144 1822 aa13.89□□□□□ -0.19
RNF220-215ENST00000487332 ADAMTS7Q9UKP4 1686 aa13.88□□□□□ -0.19
RNF220-215ENST00000487332 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
RNF220-215ENST00000487332 C5P01031 1676 aa13.88□□□□□ -0.19
RNF220-215ENST00000487332 MRC1P22897 1456 aa13.87□□□□□ -0.19
RNF220-215ENST00000487332 PALLDQ8WX93 1383 aa13.87□□□□□ -0.19
RNF220-215ENST00000487332 CICQ96RK0 1608 aaPredicted RBP13.87□□□□□ -0.19
RNF220-215ENST00000487332 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
RNF220-215ENST00000487332 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
RNF220-215ENST00000487332 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
RNF220-215ENST00000487332 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
RNF220-215ENST00000487332 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
RNF220-215ENST00000487332 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
RNF220-215ENST00000487332 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
RNF220-215ENST00000487332 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
RNF220-215ENST00000487332 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
RNF220-215ENST00000487332 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
RNF220-215ENST00000487332 COL24A1Q17RW2 1714 aa13.84□□□□□ -0.19
RNF220-215ENST00000487332 ZNF827Q17R98 1081 aa13.84□□□□□ -0.19
RNF220-215ENST00000487332 ZNF530Q6P9A1 599 aaPredicted RBP13.84□□□□□ -0.19
RNF220-215ENST00000487332 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
RNF220-215ENST00000487332 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
RNF220-215ENST00000487332 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 AKAP4Q5JQC9 854 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 C1orf141Q5JVX7 400 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 PIGBQ92521 554 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 SPON1Q9HCB6 807 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 TUBGCP6Q96RT7 1819 aa13.83□□□□□ -0.2
RNF220-215ENST00000487332 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
RNF220-215ENST00000487332 SLC16A10Q8TF71 515 aa13.81□□□□□ -0.2
RNF220-215ENST00000487332 MTFR1LQ9H019 292 aa13.81□□□□□ -0.2
RNF220-215ENST00000487332 NUDCQ9Y266 331 aa13.8□□□□□ -0.2
RNF220-215ENST00000487332 HMOX1P09601 288 aa13.79□□□□□ -0.2
RNF220-215ENST00000487332 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
RNF220-215ENST00000487332 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
RNF220-215ENST00000487332 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
RNF220-215ENST00000487332 SIK1P57059 783 aa13.78□□□□□ -0.2
RNF220-215ENST00000487332 RALBP1Q15311 655 aa13.78□□□□□ -0.2
RNF220-215ENST00000487332 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
RNF220-215ENST00000487332 SGIP1Q9BQI5 828 aa13.78□□□□□ -0.2
RNF220-215ENST00000487332 ATG3Q9NT62 314 aa13.78□□□□□ -0.2
RNF220-215ENST00000487332 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
RNF220-215ENST00000487332 FLAD1Q8NFF5 587 aa13.77□□□□□ -0.21
RNF220-215ENST00000487332 MAP3K5Q99683 1374 aa13.77□□□□□ -0.21
RNF220-215ENST00000487332 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
RNF220-215ENST00000487332 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
RNF220-215ENST00000487332 PTGER2P43116 358 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms