RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 ZBTB40Q9NUA8 1239 aa28.81■■■□□ 2.2
LRRC1-203ENST00000487251 CHL1O00533 1208 aa28.79■■■□□ 2.2
LRRC1-203ENST00000487251 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
LRRC1-203ENST00000487251 CRB1P82279 1406 aa28.78■■■□□ 2.2
LRRC1-203ENST00000487251 USHBP1Q8N6Y0 703 aa28.77■■■□□ 2.2
LRRC1-203ENST00000487251 ZBTB7CA1YPR0 619 aa28.76■■■□□ 2.19
LRRC1-203ENST00000487251 RTN4Q9NQC3 1192 aaKnown RBP28.76■■■□□ 2.19
LRRC1-203ENST00000487251 NFAT5O94916 1531 aa28.74■■■□□ 2.19
LRRC1-203ENST00000487251 PROSER2Q86WR7 435 aaPredicted RBP28.73■■■□□ 2.19
LRRC1-203ENST00000487251 ARHGAP45Q92619 1136 aa28.73■■■□□ 2.19
LRRC1-203ENST00000487251 C1orf115Q9H7X2 142 aa28.73■■■□□ 2.19
LRRC1-203ENST00000487251 HDAC1Q13547 482 aaPredicted RBP28.73■■■□□ 2.19
LRRC1-203ENST00000487251 RTF1Q92541 710 aaKnown RBP28.73■■■□□ 2.19
LRRC1-203ENST00000487251 KIF24Q5T7B8 1368 aa28.72■■■□□ 2.19
LRRC1-203ENST00000487251 RGPD2P0DJD1 1756 aa28.72■■■□□ 2.19
LRRC1-203ENST00000487251 ABCC4O15439 1325 aa28.71■■■□□ 2.19
LRRC1-203ENST00000487251 ZBTB7BO15156 539 aaPredicted RBP28.71■■■□□ 2.19
LRRC1-203ENST00000487251 GAS2L2Q8NHY3 880 aa28.7■■■□□ 2.18
LRRC1-203ENST00000487251 SEC24BO95487 1268 aa28.68■■■□□ 2.18
LRRC1-203ENST00000487251 LMOD2Q6P5Q4 547 aa28.68■■■□□ 2.18
LRRC1-203ENST00000487251 TSPYL4Q9UJ04 414 aa28.68■■■□□ 2.18
LRRC1-203ENST00000487251 IP6K1Q92551 441 aa28.67■■■□□ 2.18
LRRC1-203ENST00000487251 RTL1A6NKG5 1358 aa28.66■■■□□ 2.18
LRRC1-203ENST00000487251 KIAA0232Q92628 1395 aa28.66■■■□□ 2.18
LRRC1-203ENST00000487251 USP35Q9P2H5 1018 aa28.65■■■□□ 2.18
LRRC1-203ENST00000487251 STRCP1A6NGW2 1772 aa28.65■■■□□ 2.18
LRRC1-203ENST00000487251 NBPF6Q5VWK0 638 aa28.64■■■□□ 2.18
LRRC1-203ENST00000487251 SMC5Q8IY18 1101 aa28.64■■■□□ 2.18
LRRC1-203ENST00000487251 NBPF4Q96M43 638 aa28.64■■■□□ 2.18
LRRC1-203ENST00000487251 API5Q9BZZ5 524 aaKnown RBP28.64■■■□□ 2.18
LRRC1-203ENST00000487251 LRRC37A3O60309 1634 aa28.64■■■□□ 2.17
LRRC1-203ENST00000487251 GNAT3A8MTJ3 354 aa28.63■■■□□ 2.17
LRRC1-203ENST00000487251 MSH6P52701 1360 aa28.63■■■□□ 2.17
LRRC1-203ENST00000487251 RGS12O14924 1447 aa28.62■■■□□ 2.17
LRRC1-203ENST00000487251 LRRC59Q96AG4 307 aaKnown RBP28.62■■■□□ 2.17
LRRC1-203ENST00000487251 TRPM3Q9HCF6 1732 aaPredicted RBP28.62■■■□□ 2.17
LRRC1-203ENST00000487251 IL17REQ8NFR9 667 aa28.61■■■□□ 2.17
LRRC1-203ENST00000487251 C1orf167Q5SNV9 1468 aa28.6■■■□□ 2.17
LRRC1-203ENST00000487251 GCP02774 474 aa28.6■■■□□ 2.17
LRRC1-203ENST00000487251 KCNH5Q8NCM2 988 aa28.6■■■□□ 2.17
LRRC1-203ENST00000487251 USP19O94966 1318 aa28.59■■■□□ 2.17
LRRC1-203ENST00000487251 MAP3K5Q99683 1374 aa28.59■■■□□ 2.17
LRRC1-203ENST00000487251 KRT28Q7Z3Y7 464 aa28.59■■■□□ 2.17
LRRC1-203ENST00000487251 SLC4A2P04920 1241 aa28.58■■■□□ 2.17
LRRC1-203ENST00000487251 SLC4A3P48751 1232 aa28.58■■■□□ 2.17
LRRC1-203ENST00000487251 SIRT2Q8IXJ6 389 aa28.58■■■□□ 2.17
LRRC1-203ENST00000487251 HSPA2P54652 639 aa28.58■■■□□ 2.16
LRRC1-203ENST00000487251 DDX17Q92841 729 aaKnown RBP28.58■■■□□ 2.16
LRRC1-203ENST00000487251 C19orf44Q9H6X5 657 aa28.58■■■□□ 2.16
LRRC1-203ENST00000487251 G2E3Q7L622 706 aa28.57■■■□□ 2.16
LRRC1-203ENST00000487251 LNPKQ9C0E8 428 aa28.56■■■□□ 2.16
LRRC1-203ENST00000487251 PHRF1Q9P1Y6 1649 aaKnown RBP28.56■■■□□ 2.16
LRRC1-203ENST00000487251 HTATSF1O43719 755 aaKnown RBP28.56■■■□□ 2.16
LRRC1-203ENST00000487251 HAP1P54257 671 aaPredicted RBP28.55■■■□□ 2.16
LRRC1-203ENST00000487251 SLIT3O75094 1523 aa28.55■■■□□ 2.16
LRRC1-203ENST00000487251 DDRGK1Q96HY6 314 aa28.54■■■□□ 2.16
LRRC1-203ENST00000487251 TMEM94Q12767 1356 aa28.54■■■□□ 2.16
LRRC1-203ENST00000487251 RGPD5Q99666 1765 aa28.54■■■□□ 2.16
LRRC1-203ENST00000487251 ARHGEF25Q86VW2 580 aa28.54■■■□□ 2.16
LRRC1-203ENST00000487251 NUCB1Q02818 461 aa28.53■■■□□ 2.16
LRRC1-203ENST00000487251 NECTIN2Q92692 538 aa28.53■■■□□ 2.16
LRRC1-203ENST00000487251 KIF1AQ12756 1690 aa28.53■■■□□ 2.16
LRRC1-203ENST00000487251 INTS3Q68E01 1043 aaKnown RBP28.52■■■□□ 2.16
LRRC1-203ENST00000487251 CHMP4BQ9H444 224 aaKnown RBP28.52■■■□□ 2.16
LRRC1-203ENST00000487251 AXIN2Q9Y2T1 843 aa28.5■■■□□ 2.15
LRRC1-203ENST00000487251 F6X3S4 739 aa28.49■■■□□ 2.15
LRRC1-203ENST00000487251 CHD1LQ86WJ1 897 aa28.49■■■□□ 2.15
LRRC1-203ENST00000487251 PTPRCP08575 1304 aa28.49■■■□□ 2.15
LRRC1-203ENST00000487251 MST1RQ04912 1400 aa28.49■■■□□ 2.15
LRRC1-203ENST00000487251 ANKRD45Q5TZF3 282 aa28.49■■■□□ 2.15
LRRC1-203ENST00000487251 LGR6Q9HBX8 967 aa28.49■■■□□ 2.15
LRRC1-203ENST00000487251 FAM208AQ9UK61 1670 aaKnown RBP28.49■■■□□ 2.15
LRRC1-203ENST00000487251 ATF3P18847 181 aa28.48■■■□□ 2.15
LRRC1-203ENST00000487251 TAF7Q15545 349 aaPredicted RBP28.48■■■□□ 2.15
LRRC1-203ENST00000487251 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.47■■■□□ 2.15
LRRC1-203ENST00000487251 ALS2Q96Q42 1657 aa28.47■■■□□ 2.15
LRRC1-203ENST00000487251 ANKRD24Q8TF21 1146 aa28.47■■■□□ 2.15
LRRC1-203ENST00000487251 ZC3H6P61129 1189 aaKnown RBP28.46■■■□□ 2.15
LRRC1-203ENST00000487251 MEIS3Q99687 375 aa28.45■■■□□ 2.15
LRRC1-203ENST00000487251 BRPF3Q9ULD4 1205 aa28.45■■■□□ 2.15
LRRC1-203ENST00000487251 SLC4A10Q6U841 1118 aa28.45■■■□□ 2.14
LRRC1-203ENST00000487251 MED1Q15648 1581 aaPredicted RBP28.45■■■□□ 2.14
LRRC1-203ENST00000487251 GCC1Q96CN9 775 aa28.44■■■□□ 2.14
LRRC1-203ENST00000487251 PXDNQ92626 1479 aa28.43■■■□□ 2.14
LRRC1-203ENST00000487251 ATP10DQ9P241 1426 aa28.43■■■□□ 2.14
LRRC1-203ENST00000487251 CEMIPQ8WUJ3 1361 aa28.43■■■□□ 2.14
LRRC1-203ENST00000487251 ZNF530Q6P9A1 599 aaPredicted RBP28.42■■■□□ 2.14
LRRC1-203ENST00000487251 STK31Q9BXU1 1019 aa28.42■■■□□ 2.14
LRRC1-203ENST00000487251 LMO7Q8WWI1 1683 aa28.42■■■□□ 2.14
LRRC1-203ENST00000487251 MPRIPQ6WCQ1 1025 aa28.41■■■□□ 2.14
LRRC1-203ENST00000487251 NFKBIBQ15653 356 aa28.4■■■□□ 2.14
LRRC1-203ENST00000487251 GSE1Q14687 1217 aa28.39■■■□□ 2.14
LRRC1-203ENST00000487251 CCDC30Q5VVM6 783 aa28.39■■■□□ 2.14
LRRC1-203ENST00000487251 CACNA1FO60840 1977 aa28.39■■■□□ 2.14
LRRC1-203ENST00000487251 KCNQ3O43525 872 aa28.39■■■□□ 2.14
LRRC1-203ENST00000487251 XIRP1Q702N8 1843 aaKnown RBP28.38■■■□□ 2.13
LRRC1-203ENST00000487251 FLIIQ13045 1269 aa28.38■■■□□ 2.13
LRRC1-203ENST00000487251 CABLES1Q8TDN4 633 aa28.38■■■□□ 2.13
LRRC1-203ENST00000487251 CEP85Q6P2H3 762 aa28.38■■■□□ 2.13
LRRC1-203ENST00000487251 KDM3BQ7LBC6 1761 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms