RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PIK3C2AO00443 1686 aa18.02■□□□□ 0.47
ATPAF1-205ENST00000487193 KCNH5Q8NCM2 988 aa18■□□□□ 0.47
ATPAF1-205ENST00000487193 RRAGCQ9HB90 399 aa18■□□□□ 0.47
ATPAF1-205ENST00000487193 LY75O60449 1722 aa18■□□□□ 0.47
ATPAF1-205ENST00000487193 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
ATPAF1-205ENST00000487193 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
ATPAF1-205ENST00000487193 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
ATPAF1-205ENST00000487193 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
ATPAF1-205ENST00000487193 DCAF11Q8TEB1 546 aa17.97■□□□□ 0.47
ATPAF1-205ENST00000487193 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
ATPAF1-205ENST00000487193 SMC1BQ8NDV3 1235 aa17.96■□□□□ 0.47
ATPAF1-205ENST00000487193 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
ATPAF1-205ENST00000487193 C9orf131Q5VYM1 1079 aa17.95■□□□□ 0.46
ATPAF1-205ENST00000487193 KCPQ6ZWJ8 1503 aa17.94■□□□□ 0.46
ATPAF1-205ENST00000487193 KDM2BQ8NHM5 1336 aa17.93■□□□□ 0.46
ATPAF1-205ENST00000487193 ANKRD36BQ8N2N9 1353 aa17.92■□□□□ 0.46
ATPAF1-205ENST00000487193 ERBB3P21860 1342 aa17.92■□□□□ 0.46
ATPAF1-205ENST00000487193 NSD2O96028 1365 aa17.91■□□□□ 0.46
ATPAF1-205ENST00000487193 A0A0G2JLW4 131 aa17.91■□□□□ 0.46
ATPAF1-205ENST00000487193 PHF14O94880 888 aa17.91■□□□□ 0.46
ATPAF1-205ENST00000487193 DOT1LQ8TEK3 1739 aa17.91■□□□□ 0.46
ATPAF1-205ENST00000487193 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
ATPAF1-205ENST00000487193 USP47Q96K76 1375 aa17.91■□□□□ 0.46
ATPAF1-205ENST00000487193 FOXN1O15353 648 aa17.9■□□□□ 0.46
ATPAF1-205ENST00000487193 ANKRD24Q8TF21 1146 aa17.9■□□□□ 0.46
ATPAF1-205ENST00000487193 C5P01031 1676 aa17.9■□□□□ 0.46
ATPAF1-205ENST00000487193 TTC21BQ7Z4L5 1316 aa17.89■□□□□ 0.45
ATPAF1-205ENST00000487193 USP54Q70EL1 1684 aa17.88■□□□□ 0.45
ATPAF1-205ENST00000487193 FCHSD2O94868 740 aa17.88■□□□□ 0.45
ATPAF1-205ENST00000487193 MLLT1Q03111 559 aaPredicted RBP17.88■□□□□ 0.45
ATPAF1-205ENST00000487193 AMIGO3Q86WK7 504 aa17.88■□□□□ 0.45
ATPAF1-205ENST00000487193 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
ATPAF1-205ENST00000487193 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
ATPAF1-205ENST00000487193 NFAT5O94916 1531 aa17.87■□□□□ 0.45
ATPAF1-205ENST00000487193 AK7Q96M32 723 aa17.86■□□□□ 0.45
ATPAF1-205ENST00000487193 PXDNLA1KZ92 1463 aa17.86■□□□□ 0.45
ATPAF1-205ENST00000487193 QRICH2Q9H0J4 1663 aa17.86■□□□□ 0.45
ATPAF1-205ENST00000487193 ABHD8Q96I13 439 aa17.85■□□□□ 0.45
ATPAF1-205ENST00000487193 RNF181Q9P0P0 153 aa17.85■□□□□ 0.45
ATPAF1-205ENST00000487193 MKRN1Q9UHC7 482 aaKnown RBP17.85■□□□□ 0.45
ATPAF1-205ENST00000487193 TGFB2P61812 414 aa17.84■□□□□ 0.45
ATPAF1-205ENST00000487193 PKD1L3Q7Z443 1732 aa17.84■□□□□ 0.45
ATPAF1-205ENST00000487193 C10orf71Q711Q0 1435 aa17.83■□□□□ 0.45
ATPAF1-205ENST00000487193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.83■□□□□ 0.44
ATPAF1-205ENST00000487193 TAF1LQ8IZX4 1826 aa17.83■□□□□ 0.44
ATPAF1-205ENST00000487193 TNRC6CQ9HCJ0 1690 aaKnown RBP17.83■□□□□ 0.44
ATPAF1-205ENST00000487193 DPEP1P16444 411 aa17.82■□□□□ 0.44
ATPAF1-205ENST00000487193 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
ATPAF1-205ENST00000487193 LTV1Q96GA3 475 aaPredicted RBP17.81■□□□□ 0.44
ATPAF1-205ENST00000487193 CCDC85CA6NKD9 419 aa17.8■□□□□ 0.44
ATPAF1-205ENST00000487193 MMP10P09238 476 aa17.8■□□□□ 0.44
ATPAF1-205ENST00000487193 CTCFP49711 727 aaPredicted RBP17.8■□□□□ 0.44
ATPAF1-205ENST00000487193 ZCRB1Q8TBF4 217 aaKnown RBP17.8■□□□□ 0.44
ATPAF1-205ENST00000487193 ZNF692Q9BU19 519 aaPredicted RBP17.8■□□□□ 0.44
ATPAF1-205ENST00000487193 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
ATPAF1-205ENST00000487193 C4BP0C0L5 1744 aa17.79■□□□□ 0.44
ATPAF1-205ENST00000487193 HMGB2P26583 209 aaKnown RBP17.79■□□□□ 0.44
ATPAF1-205ENST00000487193 AIDAQ96BJ3 306 aa17.79■□□□□ 0.44
ATPAF1-205ENST00000487193 LTN1O94822 1766 aa17.79■□□□□ 0.44
ATPAF1-205ENST00000487193 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
ATPAF1-205ENST00000487193 LBX1P52954 281 aa17.78■□□□□ 0.44
ATPAF1-205ENST00000487193 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
ATPAF1-205ENST00000487193 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
ATPAF1-205ENST00000487193 KIF13BQ9NQT8 1826 aa17.77■□□□□ 0.44
ATPAF1-205ENST00000487193 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
ATPAF1-205ENST00000487193 PALLDQ8WX93 1383 aa17.77■□□□□ 0.43
ATPAF1-205ENST00000487193 CENPJQ9HC77 1338 aaPredicted RBP17.76■□□□□ 0.43
ATPAF1-205ENST00000487193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
ATPAF1-205ENST00000487193 STAC3Q96MF2 364 aa17.76■□□□□ 0.43
ATPAF1-205ENST00000487193 SSFA2P28290 1259 aa17.75■□□□□ 0.43
ATPAF1-205ENST00000487193 RGS19P49795 217 aa17.74■□□□□ 0.43
ATPAF1-205ENST00000487193 NBPF1Q3BBV0 1214 aa17.74■□□□□ 0.43
ATPAF1-205ENST00000487193 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
ATPAF1-205ENST00000487193 KCNA3P22001 575 aa17.73■□□□□ 0.43
ATPAF1-205ENST00000487193 CREBZFQ9NS37 354 aa17.73■□□□□ 0.43
ATPAF1-205ENST00000487193 SBF1O95248 1867 aa17.73■□□□□ 0.43
ATPAF1-205ENST00000487193 ARFGEF1Q9Y6D6 1849 aa17.72■□□□□ 0.43
ATPAF1-205ENST00000487193 BRCA1P38398 1863 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-205ENST00000487193 PIM2Q9P1W9 311 aa17.72■□□□□ 0.43
ATPAF1-205ENST00000487193 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
ATPAF1-205ENST00000487193 KTN1Q86UP2 1357 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-205ENST00000487193 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
ATPAF1-205ENST00000487193 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
ATPAF1-205ENST00000487193 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
ATPAF1-205ENST00000487193 NME9Q86XW9 330 aa17.7■□□□□ 0.42
ATPAF1-205ENST00000487193 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
ATPAF1-205ENST00000487193 GLTPD2A6NH11 291 aa17.69■□□□□ 0.42
ATPAF1-205ENST00000487193 GNPATO15228 680 aa17.69■□□□□ 0.42
ATPAF1-205ENST00000487193 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
ATPAF1-205ENST00000487193 IP6K1Q92551 441 aa17.68■□□□□ 0.42
ATPAF1-205ENST00000487193 TMF1P82094 1093 aa17.67■□□□□ 0.42
ATPAF1-205ENST00000487193 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
ATPAF1-205ENST00000487193 EVC2Q86UK5 1308 aa17.67■□□□□ 0.42
ATPAF1-205ENST00000487193 MEGF6O75095 1541 aa17.67■□□□□ 0.42
ATPAF1-205ENST00000487193 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
ATPAF1-205ENST00000487193 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
ATPAF1-205ENST00000487193 VEGFBP49765 207 aa17.66■□□□□ 0.42
ATPAF1-205ENST00000487193 RASSF7Q02833 373 aa17.66■□□□□ 0.42
ATPAF1-205ENST00000487193 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
ATPAF1-205ENST00000487193 WBP1LQ9NX94 342 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms