RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	ZRANB1	Q9UGI0	708 aa		13.67	□□□□□ -0.22
KRIT1-223	ENST00000487168	RGPD5	Q99666	1765 aa		13.67	□□□□□ -0.22
KRIT1-223	ENST00000487168	LRRC37A3	O60309	1634 aa		13.67	□□□□□ -0.22
KRIT1-223	ENST00000487168	MAP3K19	Q56UN5	1328 aa		13.66	□□□□□ -0.22
KRIT1-223	ENST00000487168	OVOS2	A0A0G2JMS6	1433 aa		13.66	□□□□□ -0.22
KRIT1-223	ENST00000487168	EVX2	Q03828	476 aa		13.66	□□□□□ -0.22
KRIT1-223	ENST00000487168	PDE3B	Q13370	1112 aa		13.66	□□□□□ -0.22
KRIT1-223	ENST00000487168	SF3B2	Q13435	895 aa	Known RBP	13.66	□□□□□ -0.22
KRIT1-223	ENST00000487168	FLT4	P35916	1363 aa		13.66	□□□□□ -0.22
KRIT1-223	ENST00000487168	TNS2	Q63HR2	1409 aa		13.65	□□□□□ -0.22
KRIT1-223	ENST00000487168	SMG6	Q86US8	1419 aa	Known RBP	13.65	□□□□□ -0.22
KRIT1-223	ENST00000487168	PEAK1	Q9H792	1746 aa		13.65	□□□□□ -0.22
KRIT1-223	ENST00000487168	PLCD3	Q8N3E9	789 aa		13.65	□□□□□ -0.22
KRIT1-223	ENST00000487168	INSR	P06213	1382 aa		13.65	□□□□□ -0.22
KRIT1-223	ENST00000487168	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.64	□□□□□ -0.23
KRIT1-223	ENST00000487168	RGPD4	Q7Z3J3	1758 aa		13.64	□□□□□ -0.23
KRIT1-223	ENST00000487168	CSB-PGBD3	P0DP91	1061 aa		13.64	□□□□□ -0.23
KRIT1-223	ENST00000487168	USP35	Q9P2H5	1018 aa		13.64	□□□□□ -0.23
KRIT1-223	ENST00000487168	SOX12	O15370	315 aa		13.63	□□□□□ -0.23
KRIT1-223	ENST00000487168	HOXC9	P31274	260 aa		13.63	□□□□□ -0.23
KRIT1-223	ENST00000487168	DDB1	Q16531	1140 aa		13.63	□□□□□ -0.23
KRIT1-223	ENST00000487168	ANKRD24	Q8TF21	1146 aa		13.63	□□□□□ -0.23
KRIT1-223	ENST00000487168	TNS1	Q9HBL0	1735 aa	Known RBP	13.63	□□□□□ -0.23
KRIT1-223	ENST00000487168	ZBTB7C	A1YPR0	619 aa		13.62	□□□□□ -0.23
KRIT1-223	ENST00000487168	BAG6	P46379	1132 aa		13.62	□□□□□ -0.23
KRIT1-223	ENST00000487168	AMPH	P49418	695 aa		13.62	□□□□□ -0.23
KRIT1-223	ENST00000487168	GGNBP2	Q9H3C7	697 aa		13.62	□□□□□ -0.23
KRIT1-223	ENST00000487168	KIF7	Q2M1P5	1343 aa		13.62	□□□□□ -0.23
KRIT1-223	ENST00000487168	NPC1L1	Q9UHC9	1359 aa		13.61	□□□□□ -0.23
KRIT1-223	ENST00000487168	IL2RB	P14784	551 aa		13.61	□□□□□ -0.23
KRIT1-223	ENST00000487168	NCAPD2	Q15021	1401 aa		13.61	□□□□□ -0.23
KRIT1-223	ENST00000487168	PANK3	Q9H999	370 aa		13.6	□□□□□ -0.23
KRIT1-223	ENST00000487168	NLRP2	Q9NX02	1062 aa		13.6	□□□□□ -0.23
KRIT1-223	ENST00000487168	EXOC5	O00471	708 aa		13.59	□□□□□ -0.23
KRIT1-223	ENST00000487168	WASHC2A	Q641Q2	1341 aa		13.59	□□□□□ -0.23
KRIT1-223	ENST00000487168	MIER1	Q8N108	512 aa		13.58	□□□□□ -0.24
KRIT1-223	ENST00000487168	KNSTRN	Q9Y448	316 aa		13.58	□□□□□ -0.24
KRIT1-223	ENST00000487168	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.57	□□□□□ -0.24
KRIT1-223	ENST00000487168	SBF2	Q86WG5	1849 aa		13.57	□□□□□ -0.24
KRIT1-223	ENST00000487168	CHADL	Q6NUI6	762 aa		13.56	□□□□□ -0.24
KRIT1-223	ENST00000487168	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.56	□□□□□ -0.24
KRIT1-223	ENST00000487168	PLSCR1	O15162	318 aa		13.55	□□□□□ -0.24
KRIT1-223	ENST00000487168	PRR29	P0C7W0	189 aa		13.55	□□□□□ -0.24
KRIT1-223	ENST00000487168	RRS1	Q15050	365 aa	Known RBP	13.55	□□□□□ -0.24
KRIT1-223	ENST00000487168	MARCH10	Q8NA82	808 aa	Predicted RBP	13.55	□□□□□ -0.24
KRIT1-223	ENST00000487168	MAP2	P11137	1827 aa	Known RBP	13.55	□□□□□ -0.24
KRIT1-223	ENST00000487168	NHS	Q6T4R5	1651 aa		13.54	□□□□□ -0.24
KRIT1-223	ENST00000487168	RREB1	Q92766	1687 aa		13.54	□□□□□ -0.24
KRIT1-223	ENST00000487168	POLK	Q9UBT6	870 aa		13.54	□□□□□ -0.24
KRIT1-223	ENST00000487168	RGL2	O15211	777 aa		13.53	□□□□□ -0.24
KRIT1-223	ENST00000487168	PER1	O15534	1290 aa	Predicted RBP	13.53	□□□□□ -0.24
KRIT1-223	ENST00000487168	TRIM37	O94972	964 aa		13.53	□□□□□ -0.24
KRIT1-223	ENST00000487168	HSP90AB2P	Q58FF8	381 aa		13.53	□□□□□ -0.24
KRIT1-223	ENST00000487168	CAMKK2	Q96RR4	588 aa		13.53	□□□□□ -0.24
KRIT1-223	ENST00000487168	POLR3GL	Q9BT43	218 aa		13.53	□□□□□ -0.24
KRIT1-223	ENST00000487168	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.53	□□□□□ -0.24	3e-7	■■■□□ 18.7
KRIT1-223	ENST00000487168	HMGB2	P26583	209 aa	Known RBP	13.52	□□□□□ -0.25
KRIT1-223	ENST00000487168	DEFB132	Q7Z7B7	95 aa		13.52	□□□□□ -0.25
KRIT1-223	ENST00000487168	RAPGEF4	Q8WZA2	1011 aa		13.52	□□□□□ -0.25
KRIT1-223	ENST00000487168	CFAP44	Q96MT7	982 aa		13.52	□□□□□ -0.25
KRIT1-223	ENST00000487168	TAOK2	Q9UL54	1235 aa		13.52	□□□□□ -0.25
KRIT1-223	ENST00000487168	PKD1L3	Q7Z443	1732 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	MEGF6	O75095	1541 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	APBA3	O96018	575 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	FAM182B	Q5T319	152 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	NBPF6	Q5VWK0	638 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	MORC1	Q86VD1	984 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	NBPF4	Q96M43	638 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	EMILIN1	Q9Y6C2	1016 aa		13.51	□□□□□ -0.25
KRIT1-223	ENST00000487168	C19orf67	A6NJJ6	358 aa		13.5	□□□□□ -0.25
KRIT1-223	ENST00000487168	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.5	□□□□□ -0.25
KRIT1-223	ENST00000487168	SHANK3	Q9BYB0	1731 aa		13.5	□□□□□ -0.25
KRIT1-223	ENST00000487168	PCDH11X	Q9BZA7	1347 aa		13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	PCDH11Y	Q9BZA8	1340 aa		13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	TAT	P17735	454 aa	Predicted RBP	13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	FBLN1	P23142	703 aa		13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	SPRYD3	Q8NCJ5	442 aa		13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	ZCRB1	Q8TBF4	217 aa	Known RBP	13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	LTV1	Q96GA3	475 aa	Predicted RBP	13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	RGPD2	P0DJD1	1756 aa		13.49	□□□□□ -0.25
KRIT1-223	ENST00000487168	NUP188	Q5SRE5	1749 aa		13.48	□□□□□ -0.25
KRIT1-223	ENST00000487168	IGSF1	Q8N6C5	1336 aa		13.48	□□□□□ -0.25
KRIT1-223	ENST00000487168	EN1	Q05925	392 aa	Predicted RBP	13.48	□□□□□ -0.25
KRIT1-223	ENST00000487168	KDR	P35968	1356 aa		13.46	□□□□□ -0.25
KRIT1-223	ENST00000487168	LRP5	O75197	1615 aa		13.46	□□□□□ -0.26
KRIT1-223	ENST00000487168	PPM1G	O15355	546 aa	Predicted RBP	13.45	□□□□□ -0.26
KRIT1-223	ENST00000487168	EIF4A2	Q14240	407 aa	Known RBP	13.45	□□□□□ -0.26
KRIT1-223	ENST00000487168	NKX1-1	Q15270	411 aa	Predicted RBP	13.45	□□□□□ -0.26
KRIT1-223	ENST00000487168	NBPF14	Q5TI25	921 aa		13.45	□□□□□ -0.26
KRIT1-223	ENST00000487168	EYA1	Q99502	592 aa		13.45	□□□□□ -0.26
KRIT1-223	ENST00000487168	SPG7	Q9UQ90	795 aa		13.45	□□□□□ -0.26
KRIT1-223	ENST00000487168	BTAF1	O14981	1849 aa		13.44	□□□□□ -0.26
KRIT1-223	ENST00000487168	ZEB1	P37275	1124 aa	Predicted RBP	13.44	□□□□□ -0.26
KRIT1-223	ENST00000487168	EZH2	Q15910	746 aa	Known RBP	13.44	□□□□□ -0.26
KRIT1-223	ENST00000487168	PRKCSH	P14314	528 aa	Predicted RBP	13.43	□□□□□ -0.26
KRIT1-223	ENST00000487168	SLC27A3	Q5K4L6	730 aa		13.43	□□□□□ -0.26
KRIT1-223	ENST00000487168	DOT1L	Q8TEK3	1739 aa		13.42	□□□□□ -0.26
KRIT1-223	ENST00000487168	AMOT	Q4VCS5	1084 aa		13.42	□□□□□ -0.26
KRIT1-223	ENST00000487168	DDX54	Q8TDD1	881 aa	Known RBP	13.42	□□□□□ -0.26
KRIT1-223	ENST00000487168	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms