RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SCTRP47872 440 aa8.83□□□□□ -1
PRPF38A-203ENST00000487160 PSME1Q06323 249 aa8.83□□□□□ -1
PRPF38A-203ENST00000487160 CCDC102BQ68D86 513 aa8.83□□□□□ -1
PRPF38A-203ENST00000487160 SIX5Q8N196 739 aa8.83□□□□□ -1
PRPF38A-203ENST00000487160 TPCN2Q8NHX9 752 aa8.82□□□□□ -1
PRPF38A-203ENST00000487160 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
PRPF38A-203ENST00000487160 TLL2Q9Y6L7 1015 aa8.82□□□□□ -1
PRPF38A-203ENST00000487160 SFI1A8K8P3 1242 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
PRPF38A-203ENST00000487160 FSHRP23945 695 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 IFFO2Q5TF58 517 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 B4GALNT3Q6L9W6 998 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 PHLDB3Q6NSJ2 640 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 MPNDQ8N594 471 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
PRPF38A-203ENST00000487160 TMPRSS4Q9NRS4 437 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 CCDC9Q9Y3X0 531 aaKnown RBP8.81□□□□□ -1
PRPF38A-203ENST00000487160 IVNS1ABPQ9Y6Y0 642 aa8.81□□□□□ -1
PRPF38A-203ENST00000487160 WNT7AO00755 349 aa8.8□□□□□ -1
PRPF38A-203ENST00000487160 SSFA2P28290 1259 aa8.8□□□□□ -1
PRPF38A-203ENST00000487160 SEC13P55735 322 aa8.8□□□□□ -1
PRPF38A-203ENST00000487160 ERVK-9P63128 1117 aa8.79□□□□□ -1
PRPF38A-203ENST00000487160 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
PRPF38A-203ENST00000487160 SPRYD7Q5W111 196 aa8.79□□□□□ -1
PRPF38A-203ENST00000487160 CC2D2BQ6DHV5 1058 aa8.79□□□□□ -1
PRPF38A-203ENST00000487160 MRGPRX2Q96LB1 330 aa8.79□□□□□ -1
PRPF38A-203ENST00000487160 ESF1Q9H501 851 aaKnown RBP8.79□□□□□ -1
PRPF38A-203ENST00000487160 DHX9Q08211 1270 aaKnown RBP8.78□□□□□ -1
PRPF38A-203ENST00000487160 TMCO4Q5TGY1 634 aa8.78□□□□□ -1
PRPF38A-203ENST00000487160 CYLDQ9NQC7 956 aa8.78□□□□□ -1
PRPF38A-203ENST00000487160 LGR5O75473 907 aa8.77□□□□□ -1.01
PRPF38A-203ENST00000487160 ADH1CP00326 375 aa8.77□□□□□ -1.01
PRPF38A-203ENST00000487160 ATP2B4P23634 1241 aa8.77□□□□□ -1.01
PRPF38A-203ENST00000487160 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
PRPF38A-203ENST00000487160 ZNF784Q8NCA9 323 aaPredicted RBP8.77□□□□□ -1.01
PRPF38A-203ENST00000487160 OSBPL3Q9H4L5 887 aa8.77□□□□□ -1.01
PRPF38A-203ENST00000487160 PRMT3O60678 531 aa8.76□□□□□ -1.01
PRPF38A-203ENST00000487160 NR5A1Q13285 461 aa8.76□□□□□ -1.01
PRPF38A-203ENST00000487160 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
PRPF38A-203ENST00000487160 CCDC116Q8IYX3 515 aa8.76□□□□□ -1.01
PRPF38A-203ENST00000487160 PRIMPOLQ96LW4 560 aa8.76□□□□□ -1.01
PRPF38A-203ENST00000487160 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
PRPF38A-203ENST00000487160 GNEQ9Y223 722 aaKnown RBP8.76□□□□□ -1.01
PRPF38A-203ENST00000487160 LILRA1O75019 489 aa8.75□□□□□ -1.01
PRPF38A-203ENST00000487160 NR3C2P08235 984 aa8.75□□□□□ -1.01
PRPF38A-203ENST00000487160 TXNDC2Q86VQ3 553 aa8.75□□□□□ -1.01
PRPF38A-203ENST00000487160 TSEN2Q8NCE0 465 aaKnown RBP8.75□□□□□ -1.01
PRPF38A-203ENST00000487160 PLA2G2EQ9NZK7 142 aa8.75□□□□□ -1.01
PRPF38A-203ENST00000487160 STAU1O95793 577 aaKnown RBP8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 ARID4AP29374 1257 aaPredicted RBP8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 SCNN1AP37088 669 aa8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 FOXC1Q12948 553 aa8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 ZNF697Q5TEC3 545 aa8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 ZNF598Q86UK7 904 aaKnown RBP8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 ZNF358Q9NW07 568 aa8.74□□□□□ -1.01
PRPF38A-203ENST00000487160 A0A0G2JS52 829 aa8.73□□□□□ -1.01
PRPF38A-203ENST00000487160 TMEM229AB2RXF0 380 aa8.73□□□□□ -1.01
PRPF38A-203ENST00000487160 ALDH1A1P00352 501 aa8.73□□□□□ -1.01
PRPF38A-203ENST00000487160 MYT1Q01538 1121 aa8.73□□□□□ -1.01
PRPF38A-203ENST00000487160 OCLNQ16625 522 aa8.73□□□□□ -1.01
PRPF38A-203ENST00000487160 TRIM52Q96A61 297 aa8.73□□□□□ -1.01
PRPF38A-203ENST00000487160 M0R2N6 131 aa8.72□□□□□ -1.01
PRPF38A-203ENST00000487160 ADD1P35611 737 aaKnown RBP8.72□□□□□ -1.01
PRPF38A-203ENST00000487160 SCNN1DP51172 638 aa8.72□□□□□ -1.01
PRPF38A-203ENST00000487160 MFAP1P55081 439 aaKnown RBP8.72□□□□□ -1.01
PRPF38A-203ENST00000487160 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
PRPF38A-203ENST00000487160 PKD2L1Q9P0L9 805 aa8.72□□□□□ -1.01
PRPF38A-203ENST00000487160 CXXC1Q9P0U4 656 aaPredicted RBP8.72□□□□□ -1.01
PRPF38A-203ENST00000487160 GDF10P55107 478 aa8.71□□□□□ -1.02
PRPF38A-203ENST00000487160 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
PRPF38A-203ENST00000487160 PGPEP1Q9NXJ5 209 aa8.71□□□□□ -1.02
PRPF38A-203ENST00000487160 EMILIN1Q9Y6C2 1016 aa8.71□□□□□ -1.02
PRPF38A-203ENST00000487160 NNTQ13423 1086 aa8.7□□□□□ -1.02
PRPF38A-203ENST00000487160 CYP2U1Q7Z449 544 aa8.7□□□□□ -1.02
PRPF38A-203ENST00000487160 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
PRPF38A-203ENST00000487160 ETNK1Q9HBU6 452 aa8.7□□□□□ -1.02
PRPF38A-203ENST00000487160 SERTAD1Q9UHV2 236 aa8.7□□□□□ -1.02
PRPF38A-203ENST00000487160 WASF2Q9Y6W5 498 aa8.7□□□□□ -1.02
PRPF38A-203ENST00000487160 WEE1P30291 646 aa8.69□□□□□ -1.02
PRPF38A-203ENST00000487160 SERPINB4P48594 390 aa8.69□□□□□ -1.02
PRPF38A-203ENST00000487160 SND1Q7KZF4 910 aaKnown RBP eCLIP8.69□□□□□ -1.02
PRPF38A-203ENST00000487160 TAS1R3Q7RTX0 852 aa8.69□□□□□ -1.02
PRPF38A-203ENST00000487160 TNS4Q8IZW8 715 aa8.69□□□□□ -1.02
PRPF38A-203ENST00000487160 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
PRPF38A-203ENST00000487160 WASLO00401 505 aaPredicted RBP8.68□□□□□ -1.02
PRPF38A-203ENST00000487160 BACH1O14867 736 aa8.68□□□□□ -1.02
PRPF38A-203ENST00000487160 GNRH1P01148 92 aa8.68□□□□□ -1.02
PRPF38A-203ENST00000487160 INHAP05111 366 aa8.68□□□□□ -1.02
PRPF38A-203ENST00000487160 V9GY48 417 aaPredicted RBP8.68□□□□□ -1.02
PRPF38A-203ENST00000487160 RGS22Q8NE09 1264 aa8.67□□□□□ -1.02
PRPF38A-203ENST00000487160 TTC24A2A3L6 582 aaPredicted RBP8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 J3QL48 77 aa8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 GDF9O60383 454 aa8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 CBLBQ13191 982 aa8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 FKBP5Q13451 457 aaPredicted RBP8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 ESCO1Q5FWF5 840 aa8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 ARHGEF10LQ9HCE6 1279 aa8.66□□□□□ -1.02
PRPF38A-203ENST00000487160 RAB6BQ9NRW1 208 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms