RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 IP6K1Q92551 441 aa21.35■■□□□ 1.01
PFDN4-204ENST00000487129 PRIM1P49642 420 aaKnown RBP21.34■■□□□ 1.01
PFDN4-204ENST00000487129 SLC12A5Q9H2X9 1139 aa21.34■■□□□ 1.01
PFDN4-204ENST00000487129 A0A1W2PP64 1363 aa21.34■■□□□ 1.01
PFDN4-204ENST00000487129 MEGF6O75095 1541 aa21.32■■□□□ 1
PFDN4-204ENST00000487129 COL23A1Q86Y22 540 aaPredicted RBP21.31■■□□□ 1
PFDN4-204ENST00000487129 SYTL4Q96C24 671 aaPredicted RBP21.3■■□□□ 1
PFDN4-204ENST00000487129 ATP10DQ9P241 1426 aa21.29■■□□□ 1
PFDN4-204ENST00000487129 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
PFDN4-204ENST00000487129 LTV1Q96GA3 475 aaPredicted RBP21.29■■□□□ 1
PFDN4-204ENST00000487129 ADCY9O60503 1353 aa21.28■■□□□ 1
PFDN4-204ENST00000487129 GRIN3BO60391 1043 aa21.28■■□□□ 1
PFDN4-204ENST00000487129 TMC1Q8TDI8 760 aa21.28■■□□□ 1
PFDN4-204ENST00000487129 CCNL1Q9UK58 526 aaPredicted RBP21.28■■□□□ 1
PFDN4-204ENST00000487129 MAP3K19Q56UN5 1328 aa21.28■■□□□ 1
PFDN4-204ENST00000487129 RGPD2P0DJD1 1756 aa21.27■■□□□ 1
PFDN4-204ENST00000487129 HOXC9P31274 260 aa21.26■□□□□ 0.99
PFDN4-204ENST00000487129 FBLN1P23142 703 aa21.25■□□□□ 0.99
PFDN4-204ENST00000487129 MSL1Q68DK7 614 aa21.25■□□□□ 0.99
PFDN4-204ENST00000487129 ZCRB1Q8TBF4 217 aaKnown RBP21.25■□□□□ 0.99
PFDN4-204ENST00000487129 TERF2IPQ9NYB0 399 aa21.24■□□□□ 0.99
PFDN4-204ENST00000487129 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
PFDN4-204ENST00000487129 PUS7Q96PZ0 661 aaKnown RBP21.23■□□□□ 0.99
PFDN4-204ENST00000487129 C5P01031 1676 aa21.22■□□□□ 0.99
PFDN4-204ENST00000487129 PIAS4Q8N2W9 510 aaPredicted RBP21.22■□□□□ 0.99
PFDN4-204ENST00000487129 USP47Q96K76 1375 aa21.22■□□□□ 0.99
PFDN4-204ENST00000487129 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
PFDN4-204ENST00000487129 CD2APQ9Y5K6 639 aa21.21■□□□□ 0.99
PFDN4-204ENST00000487129 NBPF6Q5VWK0 638 aa21.2■□□□□ 0.98
PFDN4-204ENST00000487129 NBPF4Q96M43 638 aa21.2■□□□□ 0.98
PFDN4-204ENST00000487129 TOGARAM1Q9Y4F4 1720 aa21.2■□□□□ 0.98
PFDN4-204ENST00000487129 AMIGO3Q86WK7 504 aa21.19■□□□□ 0.98
PFDN4-204ENST00000487129 TAF1LQ8IZX4 1826 aa21.18■□□□□ 0.98
PFDN4-204ENST00000487129 RTL1A6NKG5 1358 aa21.18■□□□□ 0.98
PFDN4-204ENST00000487129 AMPHP49418 695 aa21.17■□□□□ 0.98
PFDN4-204ENST00000487129 TESK2Q96S53 571 aa21.17■□□□□ 0.98
PFDN4-204ENST00000487129 HSPA6P17066 643 aa21.16■□□□□ 0.98
PFDN4-204ENST00000487129 USHBP1Q8N6Y0 703 aa21.16■□□□□ 0.98
PFDN4-204ENST00000487129 COG3Q96JB2 828 aa21.16■□□□□ 0.98
PFDN4-204ENST00000487129 GPBP1L1Q9HC44 474 aaPredicted RBP21.16■□□□□ 0.98
PFDN4-204ENST00000487129 PALLDQ8WX93 1383 aa21.15■□□□□ 0.98
PFDN4-204ENST00000487129 CGNL1Q0VF96 1302 aa21.15■□□□□ 0.98
PFDN4-204ENST00000487129 C4BP0C0L5 1744 aa21.14■□□□□ 0.97
PFDN4-204ENST00000487129 RRS1Q15050 365 aaKnown RBP21.13■□□□□ 0.97
PFDN4-204ENST00000487129 FLAD1Q8NFF5 587 aa21.12■□□□□ 0.97
PFDN4-204ENST00000487129 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
PFDN4-204ENST00000487129 ZNF526Q8TF50 670 aaPredicted RBP21.11■□□□□ 0.97
PFDN4-204ENST00000487129 UBR3Q6ZT12 1888 aa21.11■□□□□ 0.97
PFDN4-204ENST00000487129 IGSF1Q8N6C5 1336 aa21.1■□□□□ 0.97
PFDN4-204ENST00000487129 CYP27B1O15528 508 aa21.1■□□□□ 0.97
PFDN4-204ENST00000487129 CICQ96RK0 1608 aaPredicted RBP21.1■□□□□ 0.97
PFDN4-204ENST00000487129 PCDH11XQ9BZA7 1347 aa21.09■□□□□ 0.97
PFDN4-204ENST00000487129 PCDH11YQ9BZA8 1340 aa21.09■□□□□ 0.97
PFDN4-204ENST00000487129 KIF3CO14782 793 aa21.09■□□□□ 0.97
PFDN4-204ENST00000487129 RAPGEF4Q8WZA2 1011 aa21.09■□□□□ 0.97
PFDN4-204ENST00000487129 FYB1O15117 783 aa21.08■□□□□ 0.97
PFDN4-204ENST00000487129 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.96
PFDN4-204ENST00000487129 TATP17735 454 aaPredicted RBP21.07■□□□□ 0.96
PFDN4-204ENST00000487129 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
PFDN4-204ENST00000487129 WWC3Q9ULE0 1092 aa21.07■□□□□ 0.96
PFDN4-204ENST00000487129 INSRP06213 1382 aa21.07■□□□□ 0.96
PFDN4-204ENST00000487129 PKD1L3Q7Z443 1732 aa21.07■□□□□ 0.96
PFDN4-204ENST00000487129 ITGB4P16144 1822 aa21.06■□□□□ 0.96
PFDN4-204ENST00000487129 HSP90AB2PQ58FF8 381 aa21.06■□□□□ 0.96
PFDN4-204ENST00000487129 GGNBP2Q9H3C7 697 aa21.06■□□□□ 0.96
PFDN4-204ENST00000487129 NCAPD2Q15021 1401 aa21.05■□□□□ 0.96
PFDN4-204ENST00000487129 SMG6Q86US8 1419 aaKnown RBP21.05■□□□□ 0.96
PFDN4-204ENST00000487129 ST20-MTHFSA0A0A6YYL1 179 aa21.05■□□□□ 0.96
PFDN4-204ENST00000487129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.05■□□□□ 0.96
PFDN4-204ENST00000487129 PIGBQ92521 554 aa21.04■□□□□ 0.96
PFDN4-204ENST00000487129 AK7Q96M32 723 aa21.04■□□□□ 0.96
PFDN4-204ENST00000487129 KIAA1551Q9HCM1 1747 aa21.04■□□□□ 0.96
PFDN4-204ENST00000487129 FLT4P35916 1363 aa21.03■□□□□ 0.96
PFDN4-204ENST00000487129 PHF14O94880 888 aa21.03■□□□□ 0.96
PFDN4-204ENST00000487129 LINC00116Q8NCU8 138 aa21.03■□□□□ 0.96
PFDN4-204ENST00000487129 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
PFDN4-204ENST00000487129 SMARCC1Q92922 1105 aaPredicted RBP21.02■□□□□ 0.96
PFDN4-204ENST00000487129 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.96
PFDN4-204ENST00000487129 KIF24Q5T7B8 1368 aa21.01■□□□□ 0.95
PFDN4-204ENST00000487129 SSFA2P28290 1259 aa21.01■□□□□ 0.95
PFDN4-204ENST00000487129 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
PFDN4-204ENST00000487129 PXDNLA1KZ92 1463 aa21.01■□□□□ 0.95
PFDN4-204ENST00000487129 LOC102724428A0A0B4J2F2 783 aa20.99■□□□□ 0.95
PFDN4-204ENST00000487129 SIK1P57059 783 aa20.99■□□□□ 0.95
PFDN4-204ENST00000487129 KIF13BQ9NQT8 1826 aa20.99■□□□□ 0.95
PFDN4-204ENST00000487129 ITPK1Q13572 414 aa20.98■□□□□ 0.95
PFDN4-204ENST00000487129 DNAJC5GQ8N7S2 189 aa20.98■□□□□ 0.95
PFDN4-204ENST00000487129 KIF20BQ96Q89 1820 aa20.96■□□□□ 0.95
PFDN4-204ENST00000487129 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
PFDN4-204ENST00000487129 ASAP1Q9ULH1 1129 aa20.95■□□□□ 0.94
PFDN4-204ENST00000487129 EMILIN1Q9Y6C2 1016 aa20.95■□□□□ 0.94
PFDN4-204ENST00000487129 MMP10P09238 476 aa20.94■□□□□ 0.94
PFDN4-204ENST00000487129 APLP1P51693 650 aa20.94■□□□□ 0.94
PFDN4-204ENST00000487129 ANKRD26Q9UPS8 1709 aa20.94■□□□□ 0.94
PFDN4-204ENST00000487129 C10orf71Q711Q0 1435 aa20.94■□□□□ 0.94
PFDN4-204ENST00000487129 GNPATO15228 680 aa20.93■□□□□ 0.94
PFDN4-204ENST00000487129 KDRP35968 1356 aa20.93■□□□□ 0.94
PFDN4-204ENST00000487129 SLC24A1O60721 1099 aa20.92■□□□□ 0.94
PFDN4-204ENST00000487129 N4BP2Q86UW6 1770 aaPredicted RBP20.92■□□□□ 0.94
PFDN4-204ENST00000487129 TOMM70O94826 608 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms