RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 PRIM1P49642 420 aaKnown RBP21.16■□□□□ 0.98
SEMA4D-219ENST00000486935 SLC15A2Q16348 729 aa21.16■□□□□ 0.98
SEMA4D-219ENST00000486935 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
SEMA4D-219ENST00000486935 TATP17735 454 aaPredicted RBP21.15■□□□□ 0.98
SEMA4D-219ENST00000486935 RGPD3A6NKT7 1758 aaPredicted RBP21.15■□□□□ 0.98
SEMA4D-219ENST00000486935 RGPD4Q7Z3J3 1758 aa21.15■□□□□ 0.98
SEMA4D-219ENST00000486935 PANK3Q9H999 370 aa21.14■□□□□ 0.97
SEMA4D-219ENST00000486935 MEGF6O75095 1541 aa21.14■□□□□ 0.97
SEMA4D-219ENST00000486935 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
SEMA4D-219ENST00000486935 FAM208AQ9UK61 1670 aaKnown RBP21.13■□□□□ 0.97
SEMA4D-219ENST00000486935 ZBTB7AO95365 584 aa21.13■□□□□ 0.97
SEMA4D-219ENST00000486935 TNNT2P45379 298 aaPredicted RBP21.13■□□□□ 0.97
SEMA4D-219ENST00000486935 NHSQ6T4R5 1651 aa21.12■□□□□ 0.97
SEMA4D-219ENST00000486935 LRRC4BQ9NT99 713 aa21.11■□□□□ 0.97
SEMA4D-219ENST00000486935 ATF5Q9Y2D1 282 aaPredicted RBP21.11■□□□□ 0.97
SEMA4D-219ENST00000486935 KIF20BQ96Q89 1820 aa21.11■□□□□ 0.97
SEMA4D-219ENST00000486935 POLKQ9UBT6 870 aa21.1■□□□□ 0.97
SEMA4D-219ENST00000486935 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.97
SEMA4D-219ENST00000486935 KCNQ4P56696 695 aa21.08■□□□□ 0.97
SEMA4D-219ENST00000486935 DDX10Q13206 875 aaKnown RBP21.08■□□□□ 0.97
SEMA4D-219ENST00000486935 SLC27A3Q5K4L6 730 aa21.07■□□□□ 0.96
SEMA4D-219ENST00000486935 ZNF827Q17R98 1081 aa21.06■□□□□ 0.96
SEMA4D-219ENST00000486935 PCDH11XQ9BZA7 1347 aa21.05■□□□□ 0.96
SEMA4D-219ENST00000486935 PCDH11YQ9BZA8 1340 aa21.05■□□□□ 0.96
SEMA4D-219ENST00000486935 EYA1Q99502 592 aa21.05■□□□□ 0.96
SEMA4D-219ENST00000486935 BTAF1O14981 1849 aa21.04■□□□□ 0.96
SEMA4D-219ENST00000486935 PTGER2P43116 358 aa21.04■□□□□ 0.96
SEMA4D-219ENST00000486935 NSD2O96028 1365 aa21.04■□□□□ 0.96
SEMA4D-219ENST00000486935 CYP27B1O15528 508 aa21.03■□□□□ 0.96
SEMA4D-219ENST00000486935 AKT1S1Q96B36 256 aa21.03■□□□□ 0.96
SEMA4D-219ENST00000486935 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
SEMA4D-219ENST00000486935 SPG7Q9UQ90 795 aa21.02■□□□□ 0.96
SEMA4D-219ENST00000486935 EIF4A2Q14240 407 aaKnown RBP21.01■□□□□ 0.95
SEMA4D-219ENST00000486935 MPRIPQ6WCQ1 1025 aa21.01■□□□□ 0.95
SEMA4D-219ENST00000486935 MORC1Q86VD1 984 aa21.01■□□□□ 0.95
SEMA4D-219ENST00000486935 TFCP2L1Q9NZI6 479 aa21.01■□□□□ 0.95
SEMA4D-219ENST00000486935 CCNL1Q9UK58 526 aaPredicted RBP21.01■□□□□ 0.95
SEMA4D-219ENST00000486935 CASZ1Q86V15 1759 aa21■□□□□ 0.95
SEMA4D-219ENST00000486935 KNSTRNQ9Y448 316 aa21■□□□□ 0.95
SEMA4D-219ENST00000486935 KAT6BQ8WYB5 2073 aa21■□□□□ 0.95
SEMA4D-219ENST00000486935 DCAF8L1A6NGE4 600 aa20.98■□□□□ 0.95
SEMA4D-219ENST00000486935 SHANK3Q9BYB0 1731 aa20.98■□□□□ 0.95
SEMA4D-219ENST00000486935 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
SEMA4D-219ENST00000486935 DOT1LQ8TEK3 1739 aa20.96■□□□□ 0.95
SEMA4D-219ENST00000486935 NKX1-1Q15270 411 aaPredicted RBP20.96■□□□□ 0.95
SEMA4D-219ENST00000486935 SGIP1Q9BQI5 828 aa20.96■□□□□ 0.95
SEMA4D-219ENST00000486935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.96■□□□□ 0.95
SEMA4D-219ENST00000486935 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
SEMA4D-219ENST00000486935 FHDC1Q9C0D6 1143 aaPredicted RBP20.95■□□□□ 0.94
SEMA4D-219ENST00000486935 PNPLA7Q6ZV29 1317 aa20.95■□□□□ 0.94
SEMA4D-219ENST00000486935 DIEXFQ68CQ4 756 aaKnown RBP20.94■□□□□ 0.94
SEMA4D-219ENST00000486935 PIGBQ92521 554 aa20.94■□□□□ 0.94
SEMA4D-219ENST00000486935 ARXQ96QS3 562 aa20.94■□□□□ 0.94
SEMA4D-219ENST00000486935 MAP2P11137 1827 aaKnown RBP20.93■□□□□ 0.94
SEMA4D-219ENST00000486935 MSH5O43196 834 aa20.93■□□□□ 0.94
SEMA4D-219ENST00000486935 IFNL2Q8IZJ0 200 aa20.93■□□□□ 0.94
SEMA4D-219ENST00000486935 SLC16A10Q8TF71 515 aa20.93■□□□□ 0.94
SEMA4D-219ENST00000486935 PHKG2P15735 406 aa20.92■□□□□ 0.94
SEMA4D-219ENST00000486935 SMARCC1Q92922 1105 aaPredicted RBP20.92■□□□□ 0.94
SEMA4D-219ENST00000486935 SYT17Q9BSW7 474 aa20.92■□□□□ 0.94
SEMA4D-219ENST00000486935 PALLDQ8WX93 1383 aa20.92■□□□□ 0.94
SEMA4D-219ENST00000486935 AMER1Q5JTC6 1135 aaPredicted RBP20.91■□□□□ 0.94
SEMA4D-219ENST00000486935 ANKRD26Q9UPS8 1709 aa20.91■□□□□ 0.94
SEMA4D-219ENST00000486935 IGSF1Q8N6C5 1336 aa20.9■□□□□ 0.94
SEMA4D-219ENST00000486935 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
SEMA4D-219ENST00000486935 POLD1P28340 1107 aa20.89■□□□□ 0.93
SEMA4D-219ENST00000486935 HMGB2P26583 209 aaKnown RBP20.88■□□□□ 0.93
SEMA4D-219ENST00000486935 PLEKHO1Q53GL0 409 aaPredicted RBP20.88■□□□□ 0.93
SEMA4D-219ENST00000486935 COL23A1Q86Y22 540 aaPredicted RBP20.88■□□□□ 0.93
SEMA4D-219ENST00000486935 LY75O60449 1722 aa20.87■□□□□ 0.93
SEMA4D-219ENST00000486935 YY1P25490 414 aa20.86■□□□□ 0.93
SEMA4D-219ENST00000486935 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
SEMA4D-219ENST00000486935 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
SEMA4D-219ENST00000486935 KLHL34Q8N239 644 aa20.86■□□□□ 0.93
SEMA4D-219ENST00000486935 ASAP1Q9ULH1 1129 aa20.86■□□□□ 0.93
SEMA4D-219ENST00000486935 PKD1L3Q7Z443 1732 aa20.85■□□□□ 0.93
SEMA4D-219ENST00000486935 PER1O15534 1290 aaPredicted RBP20.85■□□□□ 0.93
SEMA4D-219ENST00000486935 CC2D1BQ5T0F9 858 aaKnown RBP20.85■□□□□ 0.93
SEMA4D-219ENST00000486935 SULT6B1Q6IMI4 303 aa20.85■□□□□ 0.93
SEMA4D-219ENST00000486935 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
SEMA4D-219ENST00000486935 IL13P35225 146 aa20.84■□□□□ 0.93
SEMA4D-219ENST00000486935 MTHFSP49914 203 aa20.84■□□□□ 0.93
SEMA4D-219ENST00000486935 SIK1P57059 783 aa20.84■□□□□ 0.93
SEMA4D-219ENST00000486935 AMOTQ4VCS5 1084 aa20.84■□□□□ 0.93
SEMA4D-219ENST00000486935 ZNF530Q6P9A1 599 aaPredicted RBP20.84■□□□□ 0.93
SEMA4D-219ENST00000486935 AK7Q96M32 723 aa20.83■□□□□ 0.93
SEMA4D-219ENST00000486935 ATG3Q9NT62 314 aa20.83■□□□□ 0.93
SEMA4D-219ENST00000486935 HSP90AB1P08238 724 aaKnown RBP20.82■□□□□ 0.92
SEMA4D-219ENST00000486935 MSL1Q68DK7 614 aa20.82■□□□□ 0.92
SEMA4D-219ENST00000486935 FLAD1Q8NFF5 587 aa20.82■□□□□ 0.92
SEMA4D-219ENST00000486935 DCAF5Q96JK2 942 aa20.82■□□□□ 0.92
SEMA4D-219ENST00000486935 TOGARAM1Q9Y4F4 1720 aa20.81■□□□□ 0.92
SEMA4D-219ENST00000486935 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
SEMA4D-219ENST00000486935 SMIM5Q71RC9 77 aa20.81■□□□□ 0.92
SEMA4D-219ENST00000486935 ATP6V1AP38606 617 aa20.8■□□□□ 0.92
SEMA4D-219ENST00000486935 C1orf141Q5JVX7 400 aa20.8■□□□□ 0.92
SEMA4D-219ENST00000486935 LINC00116Q8NCU8 138 aa20.8■□□□□ 0.92
SEMA4D-219ENST00000486935 PLEKHG2Q9H7P9 1386 aa20.8■□□□□ 0.92
SEMA4D-219ENST00000486935 PHF14O94880 888 aa20.79■□□□□ 0.92
SEMA4D-219ENST00000486935 CABP4P57796 275 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms