RNA–Protein interactions for RNA: ENST00000486902.5

PDE9A-223, Transcript of phosphodiesterase 9A, human

TSL 2

Gene PDE9A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-223	ENST00000486902	KLRG1	Q96E93	195 aa		13.39	□□□□□ -0.27
PDE9A-223	ENST00000486902	PPIP5K1	Q6PFW1	1433 aa		13.39	□□□□□ -0.27
PDE9A-223	ENST00000486902	SLC27A3	Q5K4L6	730 aa		13.38	□□□□□ -0.27
PDE9A-223	ENST00000486902	WDR90	Q96KV7	1748 aa		13.38	□□□□□ -0.27
PDE9A-223	ENST00000486902	TRPM1	Q7Z4N2	1603 aa		13.38	□□□□□ -0.27
PDE9A-223	ENST00000486902	TOMM70	O94826	608 aa		13.37	□□□□□ -0.27
PDE9A-223	ENST00000486902	CHRDL2	Q6WN34	429 aa		13.37	□□□□□ -0.27
PDE9A-223	ENST00000486902	CCDC7	Q96M83	1385 aa		13.36	□□□□□ -0.27
PDE9A-223	ENST00000486902	ARHGEF25	Q86VW2	580 aa		13.36	□□□□□ -0.27
PDE9A-223	ENST00000486902	REM2	Q8IYK8	340 aa	Predicted RBP	13.36	□□□□□ -0.27
PDE9A-223	ENST00000486902	CD2AP	Q9Y5K6	639 aa		13.36	□□□□□ -0.27
PDE9A-223	ENST00000486902	COL23A1	Q86Y22	540 aa	Predicted RBP	13.35	□□□□□ -0.27
PDE9A-223	ENST00000486902	RGPD5	Q99666	1765 aa		13.35	□□□□□ -0.27
PDE9A-223	ENST00000486902	SOX12	O15370	315 aa		13.34	□□□□□ -0.27
PDE9A-223	ENST00000486902	KDM2A	Q9Y2K7	1162 aa		13.34	□□□□□ -0.27
PDE9A-223	ENST00000486902	PCNT	O95613	3336 aa		13.34	□□□□□ -0.27
PDE9A-223	ENST00000486902	PIK3C2A	O00443	1686 aa		13.34	□□□□□ -0.27
PDE9A-223	ENST00000486902	NMRK2	Q9NPI5	230 aa		13.33	□□□□□ -0.28
PDE9A-223	ENST00000486902	IGSF1	Q8N6C5	1336 aa		13.33	□□□□□ -0.28
PDE9A-223	ENST00000486902	SPDYE2B	A6NHP3	402 aa		13.31	□□□□□ -0.28
PDE9A-223	ENST00000486902	SPDYE6	P0CI01	402 aa		13.31	□□□□□ -0.28
PDE9A-223	ENST00000486902	SPDYE2	Q495Y8	402 aa		13.31	□□□□□ -0.28
PDE9A-223	ENST00000486902	KAT6B	Q8WYB5	2073 aa		13.3	□□□□□ -0.28
PDE9A-223	ENST00000486902	CIC	Q96RK0	1608 aa	Predicted RBP	13.29	□□□□□ -0.28
PDE9A-223	ENST00000486902	IL2RB	P14784	551 aa		13.29	□□□□□ -0.28
PDE9A-223	ENST00000486902	SRPK2	P78362	688 aa	Known RBP	13.29	□□□□□ -0.28
PDE9A-223	ENST00000486902	RBM46	Q8TBY0	533 aa	Known RBP	13.29	□□□□□ -0.28
PDE9A-223	ENST00000486902	CABP2	Q9NPB3	220 aa		13.29	□□□□□ -0.28
PDE9A-223	ENST00000486902	NLRP2	Q9NX02	1062 aa		13.29	□□□□□ -0.28
PDE9A-223	ENST00000486902	NFAT5	O94916	1531 aa		13.29	□□□□□ -0.28
PDE9A-223	ENST00000486902	HSPA1A	P0DMV8	641 aa	Known RBP	13.28	□□□□□ -0.28
PDE9A-223	ENST00000486902	HSPA1B	P0DMV9	641 aa	Known RBP	13.28	□□□□□ -0.28
PDE9A-223	ENST00000486902	DCAF11	Q8TEB1	546 aa		13.28	□□□□□ -0.28
PDE9A-223	ENST00000486902	CCNL1	Q9UK58	526 aa	Predicted RBP	13.28	□□□□□ -0.28
PDE9A-223	ENST00000486902	NSD2	O96028	1365 aa		13.28	□□□□□ -0.28
PDE9A-223	ENST00000486902	KCNH5	Q8NCM2	988 aa		13.27	□□□□□ -0.29
PDE9A-223	ENST00000486902	SYTL4	Q96C24	671 aa	Predicted RBP	13.27	□□□□□ -0.29
PDE9A-223	ENST00000486902	CABP1	Q9NZU7	370 aa		13.27	□□□□□ -0.29
PDE9A-223	ENST00000486902	LY75	O60449	1722 aa		13.26	□□□□□ -0.29
PDE9A-223	ENST00000486902	ERBB3	P21860	1342 aa		13.26	□□□□□ -0.29
PDE9A-223	ENST00000486902	PRIM1	P49642	420 aa	Known RBP	13.26	□□□□□ -0.29
PDE9A-223	ENST00000486902	DDX54	Q8TDD1	881 aa	Known RBP	13.26	□□□□□ -0.29
PDE9A-223	ENST00000486902	FSTL1	Q12841	308 aa		13.24	□□□□□ -0.29
PDE9A-223	ENST00000486902	PCDH10	Q9P2E7	1040 aa		13.24	□□□□□ -0.29
PDE9A-223	ENST00000486902	QRICH2	Q9H0J4	1663 aa		13.24	□□□□□ -0.29
PDE9A-223	ENST00000486902	ANKRD36B	Q8N2N9	1353 aa		13.23	□□□□□ -0.29
PDE9A-223	ENST00000486902	TTC21B	Q7Z4L5	1316 aa		13.23	□□□□□ -0.29
PDE9A-223	ENST00000486902	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.23	□□□□□ -0.29
PDE9A-223	ENST00000486902	ZNF692	Q9BU19	519 aa	Predicted RBP	13.23	□□□□□ -0.29
PDE9A-223	ENST00000486902	DOT1L	Q8TEK3	1739 aa		13.22	□□□□□ -0.29
PDE9A-223	ENST00000486902	PITPNM1	O00562	1244 aa		13.21	□□□□□ -0.29
PDE9A-223	ENST00000486902	AMIGO3	Q86WK7	504 aa		13.21	□□□□□ -0.29
PDE9A-223	ENST00000486902	ANKRD24	Q8TF21	1146 aa		13.2	□□□□□ -0.3
PDE9A-223	ENST00000486902	SMIM5	Q71RC9	77 aa		13.19	□□□□□ -0.3
PDE9A-223	ENST00000486902	PXDNL	A1KZ92	1463 aa		13.18	□□□□□ -0.3
PDE9A-223	ENST00000486902	FLAD1	Q8NFF5	587 aa		13.18	□□□□□ -0.3
PDE9A-223	ENST00000486902	USP47	Q96K76	1375 aa		13.18	□□□□□ -0.3
PDE9A-223	ENST00000486902	KCP	Q6ZWJ8	1503 aa		13.18	□□□□□ -0.3
PDE9A-223	ENST00000486902	C5	P01031	1676 aa		13.18	□□□□□ -0.3
PDE9A-223	ENST00000486902	USP54	Q70EL1	1684 aa		13.18	□□□□□ -0.3
PDE9A-223	ENST00000486902	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.17	□□□□□ -0.3
PDE9A-223	ENST00000486902	ARHGAP27	Q6ZUM4	889 aa		13.17	□□□□□ -0.3
PDE9A-223	ENST00000486902	BCS1L	Q9Y276	419 aa		13.17	□□□□□ -0.3
PDE9A-223	ENST00000486902	TTC21A	Q8NDW8	1320 aa		13.16	□□□□□ -0.3
PDE9A-223	ENST00000486902	PHF14	O94880	888 aa		13.16	□□□□□ -0.3
PDE9A-223	ENST00000486902	FAM161A	Q3B820	660 aa		13.16	□□□□□ -0.3
PDE9A-223	ENST00000486902	C9orf131	Q5VYM1	1079 aa		13.16	□□□□□ -0.3
PDE9A-223	ENST00000486902	STAC3	Q96MF2	364 aa		13.16	□□□□□ -0.3
PDE9A-223	ENST00000486902	TOGARAM1	Q9Y4F4	1720 aa		13.16	□□□□□ -0.3
PDE9A-223	ENST00000486902	ZEB1	P37275	1124 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE9A-223	ENST00000486902	NBPF1	Q3BBV0	1214 aa		13.15	□□□□□ -0.3
PDE9A-223	ENST00000486902	C10orf71	Q711Q0	1435 aa		13.14	□□□□□ -0.31
PDE9A-223	ENST00000486902	KIAA1551	Q9HCM1	1747 aa		13.14	□□□□□ -0.31
PDE9A-223	ENST00000486902	SMC1B	Q8NDV3	1235 aa		13.14	□□□□□ -0.31
PDE9A-223	ENST00000486902	RRAGC	Q9HB90	399 aa		13.14	□□□□□ -0.31
PDE9A-223	ENST00000486902	SSUH2	Q9Y2M2	353 aa		13.14	□□□□□ -0.31
PDE9A-223	ENST00000486902	PLEKHG2	Q9H7P9	1386 aa		13.14	□□□□□ -0.31
PDE9A-223	ENST00000486902	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.13	□□□□□ -0.31
PDE9A-223	ENST00000486902		A0A0G2JLW4	131 aa		13.13	□□□□□ -0.31
PDE9A-223	ENST00000486902	AK7	Q96M32	723 aa		13.13	□□□□□ -0.31
PDE9A-223	ENST00000486902	PALLD	Q8WX93	1383 aa		13.12	□□□□□ -0.31
PDE9A-223	ENST00000486902	KDM2B	Q8NHM5	1336 aa		13.12	□□□□□ -0.31
PDE9A-223	ENST00000486902	TAF1L	Q8IZX4	1826 aa		13.11	□□□□□ -0.31
PDE9A-223	ENST00000486902	C4B	P0C0L5	1744 aa		13.11	□□□□□ -0.31
PDE9A-223	ENST00000486902	PIP4P2	Q8N4L2	257 aa		13.11	□□□□□ -0.31
PDE9A-223	ENST00000486902	LTV1	Q96GA3	475 aa	Predicted RBP	13.11	□□□□□ -0.31
PDE9A-223	ENST00000486902	MEGF6	O75095	1541 aa		13.11	□□□□□ -0.31
PDE9A-223	ENST00000486902	LTN1	O94822	1766 aa		13.11	□□□□□ -0.31
PDE9A-223	ENST00000486902	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.11	□□□□□ -0.31
PDE9A-223	ENST00000486902	PKD1L3	Q7Z443	1732 aa		13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	USP31	Q70CQ4	1352 aa		13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	KTN1	Q86UP2	1357 aa	Known RBP	13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	FOXN1	O15353	648 aa		13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	FCHSD2	O94868	740 aa		13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	MMP10	P09238	476 aa		13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	NME9	Q86XW9	330 aa		13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	ZCRB1	Q8TBF4	217 aa	Known RBP	13.1	□□□□□ -0.31
PDE9A-223	ENST00000486902	UBR3	Q6ZT12	1888 aa		13.09	□□□□□ -0.31
PDE9A-223	ENST00000486902	RNF181	Q9P0P0	153 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms