RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	KNDC1	Q76NI1	1749 aa		10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	PTGDR	Q13258	359 aa		10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	CFAP70	Q5T0N1	1121 aa		10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	TTC13	Q8NBP0	860 aa		10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	STAC3	Q96MF2	364 aa		10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	NBPF3	Q9H094	633 aa		10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	C14orf93	Q9H972	538 aa	Known RBP	10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	FAM198A	Q9UFP1	575 aa		10.22	□□□□□ -0.77
PUDP-204	ENST00000486446	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.21	□□□□□ -0.77
PUDP-204	ENST00000486446	NUTM2E	B1AL46	878 aa	Predicted RBP	10.21	□□□□□ -0.77
PUDP-204	ENST00000486446	RBM26	Q5T8P6	1007 aa	Known RBP	10.21	□□□□□ -0.77
PUDP-204	ENST00000486446	WAPL	Q7Z5K2	1190 aa		10.21	□□□□□ -0.77
PUDP-204	ENST00000486446	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.21	□□□□□ -0.77
PUDP-204	ENST00000486446	DCAF11	Q8TEB1	546 aa		10.21	□□□□□ -0.77
PUDP-204	ENST00000486446	ABCC11	Q96J66	1382 aa		10.21	□□□□□ -0.78
PUDP-204	ENST00000486446	TECPR2	O15040	1411 aa		10.21	□□□□□ -0.78
PUDP-204	ENST00000486446	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.21	□□□□□ -0.78
PUDP-204	ENST00000486446	C1orf167	Q5SNV9	1468 aa		10.21	□□□□□ -0.78
PUDP-204	ENST00000486446	NRXN1	Q9ULB1	1477 aa		10.21	□□□□□ -0.78
PUDP-204	ENST00000486446	NHSL1	Q5SYE7	1610 aa		10.21	□□□□□ -0.78
PUDP-204	ENST00000486446	CDC42BPG	Q6DT37	1551 aa		10.2	□□□□□ -0.78
PUDP-204	ENST00000486446	LAPTM4B	Q86VI4	370 aa		10.2	□□□□□ -0.78
PUDP-204	ENST00000486446	PACS2	Q86VP3	889 aa		10.2	□□□□□ -0.78
PUDP-204	ENST00000486446	MRPL50	Q8N5N7	158 aa	Known RBP	10.2	□□□□□ -0.78
PUDP-204	ENST00000486446	SHPRH	Q149N8	1683 aa		10.19	□□□□□ -0.78
PUDP-204	ENST00000486446	PLEKHH1	Q9ULM0	1364 aa		10.19	□□□□□ -0.78
PUDP-204	ENST00000486446	SPATA31A6	Q5VVP1	1343 aa		10.19	□□□□□ -0.78
PUDP-204	ENST00000486446	DDX17	Q92841	729 aa	Known RBP	10.19	□□□□□ -0.78
PUDP-204	ENST00000486446	ORAI2	Q96SN7	254 aa		10.19	□□□□□ -0.78
PUDP-204	ENST00000486446	NUTM2F	A1L443	756 aa		10.18	□□□□□ -0.78
PUDP-204	ENST00000486446	CENPB	P07199	599 aa	Predicted RBP	10.17	□□□□□ -0.78
PUDP-204	ENST00000486446	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
PUDP-204	ENST00000486446	ESCO1	Q5FWF5	840 aa		10.17	□□□□□ -0.78
PUDP-204	ENST00000486446	PADI6	Q6TGC4	694 aa		10.17	□□□□□ -0.78
PUDP-204	ENST00000486446	LRRC59	Q96AG4	307 aa	Known RBP	10.17	□□□□□ -0.78
PUDP-204	ENST00000486446	POGK	Q9P215	609 aa		10.17	□□□□□ -0.78
PUDP-204	ENST00000486446	LRP6	O75581	1613 aa		10.16	□□□□□ -0.78
PUDP-204	ENST00000486446	C3orf80	F5H4A9	247 aa		10.16	□□□□□ -0.78
PUDP-204	ENST00000486446	FCHSD2	O94868	740 aa		10.16	□□□□□ -0.78
PUDP-204	ENST00000486446	SIRT1	Q96EB6	747 aa		10.16	□□□□□ -0.78
PUDP-204	ENST00000486446	PRAM1	Q96QH2	718 aa		10.16	□□□□□ -0.78
PUDP-204	ENST00000486446	FMN2	Q9NZ56	1722 aa		10.16	□□□□□ -0.78
PUDP-204	ENST00000486446	TRAK1	Q9UPV9	953 aa		10.15	□□□□□ -0.78
PUDP-204	ENST00000486446	DLC1	Q96QB1	1528 aa		10.15	□□□□□ -0.78
PUDP-204	ENST00000486446	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.15	□□□□□ -0.78
PUDP-204	ENST00000486446	ADGRB1	O14514	1584 aa		10.14	□□□□□ -0.79
PUDP-204	ENST00000486446	GPR37	O15354	613 aa		10.14	□□□□□ -0.79
PUDP-204	ENST00000486446	FAM98C	Q17RN3	349 aa	Known RBP	10.14	□□□□□ -0.79
PUDP-204	ENST00000486446	TATDN2	Q93075	761 aa		10.14	□□□□□ -0.79
PUDP-204	ENST00000486446	KCTD12	Q96CX2	325 aa	Known RBP	10.14	□□□□□ -0.79
PUDP-204	ENST00000486446	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.14	□□□□□ -0.79
PUDP-204	ENST00000486446	PNPLA6	Q8IY17	1366 aa		10.14	□□□□□ -0.79
PUDP-204	ENST00000486446	AFF2	P51816	1311 aa		10.13	□□□□□ -0.79
PUDP-204	ENST00000486446	SOS2	Q07890	1332 aa	Predicted RBP	10.13	□□□□□ -0.79
PUDP-204	ENST00000486446	NPHP3	Q7Z494	1330 aa		10.13	□□□□□ -0.79
PUDP-204	ENST00000486446	GOLGA8CP	A6NN73	597 aa		10.13	□□□□□ -0.79
PUDP-204	ENST00000486446	WNT2B	Q93097	391 aa		10.13	□□□□□ -0.79
PUDP-204	ENST00000486446	ZFR	Q96KR1	1074 aa	Known RBP	10.13	□□□□□ -0.79
PUDP-204	ENST00000486446	QTRT2	Q9H974	415 aa	Known RBP	10.13	□□□□□ -0.79
PUDP-204	ENST00000486446	KIF1A	Q12756	1690 aa		10.12	□□□□□ -0.79
PUDP-204	ENST00000486446	NBPF26	B4DH59	902 aa		10.12	□□□□□ -0.79
PUDP-204	ENST00000486446	FOXO3	O43524	673 aa		10.12	□□□□□ -0.79
PUDP-204	ENST00000486446	RBM6	P78332	1123 aa	Known RBP	10.12	□□□□□ -0.79
PUDP-204	ENST00000486446	XPC	Q01831	940 aa	Predicted RBP	10.12	□□□□□ -0.79
PUDP-204	ENST00000486446	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	SMAP	O00193	183 aa		10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	TULP1	O00294	542 aa	Predicted RBP	10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	NEUROD1	Q13562	356 aa		10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	HIC1	Q14526	733 aa		10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	THSD4	Q6ZMP0	1018 aa		10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	NUDT18	Q6ZVK8	323 aa		10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	PNMA3	Q9UL41	463 aa		10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	RGPD8	O14715	1765 aa	Predicted RBP	10.11	□□□□□ -0.79
PUDP-204	ENST00000486446	RGS12	O14924	1447 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	ADAMTS2	O95450	1211 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	C8orf37	Q96NL8	207 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	SIN3A	Q96ST3	1273 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	EYA1	Q99502	592 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	HCST	Q9UBK5	93 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	KIAA1210	Q9ULL0	1709 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	PXDN	Q92626	1479 aa		10.1	□□□□□ -0.79
PUDP-204	ENST00000486446	ADGRB2	O60241	1585 aa		10.09	□□□□□ -0.79
PUDP-204	ENST00000486446	ATAD2	Q6PL18	1390 aa		10.09	□□□□□ -0.79
PUDP-204	ENST00000486446	ANKAR	Q7Z5J8	1434 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	GNPAT	O15228	680 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	IFFO2	Q5TF58	517 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	KRT28	Q7Z3Y7	464 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	GPIHBP1	Q8IV16	184 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	ANKK1	Q8NFD2	765 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	L3MBTL2	Q969R5	705 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	NGLY1	Q96IV0	654 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	ADGRG1	Q9Y653	693 aa		10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	EIF3A	Q14152	1382 aa	Known RBP	10.08	□□□□□ -0.8
PUDP-204	ENST00000486446	USP32	Q8NFA0	1604 aa		10.07	□□□□□ -0.8
PUDP-204	ENST00000486446	SOWAHB	A6NEL2	793 aa		10.07	□□□□□ -0.8
PUDP-204	ENST00000486446	WASL	O00401	505 aa	Predicted RBP	10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms