RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 MYH16Q9H6N6 1097 aa17.31■□□□□ 0.36
VTI1BP1-201ENST00000486325 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
VTI1BP1-201ENST00000486325 TRMT2AQ8IZ69 625 aaKnown RBP17.3■□□□□ 0.36
VTI1BP1-201ENST00000486325 CDCA7LQ96GN5 454 aa17.3■□□□□ 0.36
VTI1BP1-201ENST00000486325 CRB1P82279 1406 aa17.3■□□□□ 0.36
VTI1BP1-201ENST00000486325 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
VTI1BP1-201ENST00000486325 IL2RBP14784 551 aa17.28■□□□□ 0.36
VTI1BP1-201ENST00000486325 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
VTI1BP1-201ENST00000486325 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
VTI1BP1-201ENST00000486325 THRAP3Q9Y2W1 955 aaKnown RBP17.28■□□□□ 0.36
VTI1BP1-201ENST00000486325 GNAI1P63096 354 aa17.27■□□□□ 0.36
VTI1BP1-201ENST00000486325 MEX3CQ5U5Q3 659 aaKnown RBP17.27■□□□□ 0.36
VTI1BP1-201ENST00000486325 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
VTI1BP1-201ENST00000486325 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
VTI1BP1-201ENST00000486325 FNBP4Q8N3X1 1017 aaPredicted RBP17.27■□□□□ 0.36
VTI1BP1-201ENST00000486325 CDCA7Q9BWT1 371 aaPredicted RBP17.27■□□□□ 0.36
VTI1BP1-201ENST00000486325 DUSP27Q5VZP5 1158 aa17.26■□□□□ 0.35
VTI1BP1-201ENST00000486325 C8orf37Q96NL8 207 aa17.26■□□□□ 0.35
VTI1BP1-201ENST00000486325 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
VTI1BP1-201ENST00000486325 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
VTI1BP1-201ENST00000486325 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
VTI1BP1-201ENST00000486325 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
VTI1BP1-201ENST00000486325 SLIT2O94813 1529 aa17.25■□□□□ 0.35
VTI1BP1-201ENST00000486325 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
VTI1BP1-201ENST00000486325 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
VTI1BP1-201ENST00000486325 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
VTI1BP1-201ENST00000486325 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
VTI1BP1-201ENST00000486325 BABAM1Q9NWV8 329 aa17.23■□□□□ 0.35
VTI1BP1-201ENST00000486325 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
VTI1BP1-201ENST00000486325 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
VTI1BP1-201ENST00000486325 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
VTI1BP1-201ENST00000486325 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
VTI1BP1-201ENST00000486325 VPS72Q15906 364 aa17.22■□□□□ 0.35
VTI1BP1-201ENST00000486325 MCM10Q7L590 875 aa17.22■□□□□ 0.35
VTI1BP1-201ENST00000486325 USP35Q9P2H5 1018 aa17.22■□□□□ 0.35
VTI1BP1-201ENST00000486325 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 CT47B1P0C2W7 299 aaPredicted RBP17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 USP21Q9UK80 565 aa17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
VTI1BP1-201ENST00000486325 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.34
VTI1BP1-201ENST00000486325 PLCH1Q4KWH8 1693 aa17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 CHL1O00533 1208 aa17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 PHKG2P15735 406 aa17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 MEGF6O75095 1541 aa17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
VTI1BP1-201ENST00000486325 EXOC5O00471 708 aa17.19■□□□□ 0.34
VTI1BP1-201ENST00000486325 RNMTO43148 476 aaKnown RBP17.19■□□□□ 0.34
VTI1BP1-201ENST00000486325 LRP6O75581 1613 aa17.18■□□□□ 0.34
VTI1BP1-201ENST00000486325 TEFQ10587 303 aa17.18■□□□□ 0.34
VTI1BP1-201ENST00000486325 MPRIPQ6WCQ1 1025 aa17.18■□□□□ 0.34
VTI1BP1-201ENST00000486325 DCAF5Q96JK2 942 aa17.18■□□□□ 0.34
VTI1BP1-201ENST00000486325 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
VTI1BP1-201ENST00000486325 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
VTI1BP1-201ENST00000486325 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
VTI1BP1-201ENST00000486325 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
VTI1BP1-201ENST00000486325 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
VTI1BP1-201ENST00000486325 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
VTI1BP1-201ENST00000486325 CYP27B1O15528 508 aa17.16■□□□□ 0.34
VTI1BP1-201ENST00000486325 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
VTI1BP1-201ENST00000486325 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
VTI1BP1-201ENST00000486325 AFF2P51816 1311 aa17.16■□□□□ 0.34
VTI1BP1-201ENST00000486325 NRAPQ86VF7 1730 aa17.16■□□□□ 0.34
VTI1BP1-201ENST00000486325 TSR2Q969E8 191 aaKnown RBP17.15■□□□□ 0.34
VTI1BP1-201ENST00000486325 ZNF428Q96B54 188 aa17.15■□□□□ 0.34
VTI1BP1-201ENST00000486325 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
VTI1BP1-201ENST00000486325 DISP2A7MBM2 1401 aa17.14■□□□□ 0.33
VTI1BP1-201ENST00000486325 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
VTI1BP1-201ENST00000486325 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
VTI1BP1-201ENST00000486325 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
VTI1BP1-201ENST00000486325 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
VTI1BP1-201ENST00000486325 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
VTI1BP1-201ENST00000486325 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
VTI1BP1-201ENST00000486325 DDB1Q16531 1140 aa17.13■□□□□ 0.33
VTI1BP1-201ENST00000486325 CHMP4AQ9BY43 222 aa17.12■□□□□ 0.33
VTI1BP1-201ENST00000486325 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
VTI1BP1-201ENST00000486325 CABP4P57796 275 aa17.11■□□□□ 0.33
VTI1BP1-201ENST00000486325 GJD4Q96KN9 370 aaPredicted RBP17.11■□□□□ 0.33
VTI1BP1-201ENST00000486325 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
VTI1BP1-201ENST00000486325 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
VTI1BP1-201ENST00000486325 NEFLP07196 543 aa17.1■□□□□ 0.33
VTI1BP1-201ENST00000486325 ZNF772Q68DY9 489 aaPredicted RBP17.1■□□□□ 0.33
VTI1BP1-201ENST00000486325 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
VTI1BP1-201ENST00000486325 QTRT2Q9H974 415 aaKnown RBP17.1■□□□□ 0.33
VTI1BP1-201ENST00000486325 SOS1Q07889 1333 aaPredicted RBP17.1■□□□□ 0.33
VTI1BP1-201ENST00000486325 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
VTI1BP1-201ENST00000486325 MIS18AQ9NYP9 233 aa17.09■□□□□ 0.33
VTI1BP1-201ENST00000486325 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
VTI1BP1-201ENST00000486325 ONECUT3O60422 494 aaPredicted RBP17.08■□□□□ 0.32
VTI1BP1-201ENST00000486325 VAMP4O75379 141 aa17.08■□□□□ 0.32
VTI1BP1-201ENST00000486325 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.32
VTI1BP1-201ENST00000486325 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
VTI1BP1-201ENST00000486325 ALDH1L2Q3SY69 923 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms