RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 PRIM1P49642 420 aaKnown RBP14.25□□□□□ -0.13
SND1-213ENST00000486037 TNS4Q8IZW8 715 aa14.25□□□□□ -0.13
SND1-213ENST00000486037 SYTL4Q96C24 671 aaPredicted RBP14.24□□□□□ -0.13
SND1-213ENST00000486037 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
SND1-213ENST00000486037 KCNA4P22459 653 aa14.23□□□□□ -0.13
SND1-213ENST00000486037 AMIGO3Q86WK7 504 aa14.23□□□□□ -0.13
SND1-213ENST00000486037 JMYQ8N9B5 988 aa14.23□□□□□ -0.13
SND1-213ENST00000486037 ANKRD24Q8TF21 1146 aa14.23□□□□□ -0.13
SND1-213ENST00000486037 KLRG1Q96E93 195 aa14.23□□□□□ -0.13
SND1-213ENST00000486037 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
SND1-213ENST00000486037 KIAA1210Q9ULL0 1709 aa14.23□□□□□ -0.13
SND1-213ENST00000486037 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
SND1-213ENST00000486037 TOMM70O94826 608 aa14.22□□□□□ -0.13
SND1-213ENST00000486037 SMIM5Q71RC9 77 aa14.22□□□□□ -0.13
SND1-213ENST00000486037 NMRK2Q9NPI5 230 aa14.22□□□□□ -0.13
SND1-213ENST00000486037 CICQ96RK0 1608 aaPredicted RBP14.22□□□□□ -0.13
SND1-213ENST00000486037 LTN1O94822 1766 aa14.22□□□□□ -0.13
SND1-213ENST00000486037 TTC21AQ8NDW8 1320 aa14.2□□□□□ -0.14
SND1-213ENST00000486037 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
SND1-213ENST00000486037 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
SND1-213ENST00000486037 C5P01031 1676 aa14.19□□□□□ -0.14
SND1-213ENST00000486037 USP54Q70EL1 1684 aa14.19□□□□□ -0.14
SND1-213ENST00000486037 NME9Q86XW9 330 aa14.17□□□□□ -0.14
SND1-213ENST00000486037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.17□□□□□ -0.145e-7■■■□□ 15.9
SND1-213ENST00000486037 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
SND1-213ENST00000486037 SLC34A2O95436 690 aa14.16□□□□□ -0.14
SND1-213ENST00000486037 USP31Q70CQ4 1352 aa14.16□□□□□ -0.14
SND1-213ENST00000486037 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
SND1-213ENST00000486037 MON2Q7Z3U7 1717 aa14.15□□□□□ -0.14
SND1-213ENST00000486037 TAF1LQ8IZX4 1826 aa14.15□□□□□ -0.14
SND1-213ENST00000486037 FAM208AQ9UK61 1670 aaKnown RBP14.15□□□□□ -0.14
SND1-213ENST00000486037 KIAA1551Q9HCM1 1747 aa14.15□□□□□ -0.14
SND1-213ENST00000486037 USP47Q96K76 1375 aa14.14□□□□□ -0.15
SND1-213ENST00000486037 RBM46Q8TBY0 533 aaKnown RBP14.14□□□□□ -0.15
SND1-213ENST00000486037 LTV1Q96GA3 475 aaPredicted RBP14.14□□□□□ -0.15
SND1-213ENST00000486037 MEGF6O75095 1541 aa14.14□□□□□ -0.15
SND1-213ENST00000486037 EVC2Q86UK5 1308 aa14.14□□□□□ -0.15
SND1-213ENST00000486037 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
SND1-213ENST00000486037 RGPD2P0DJD1 1756 aa14.12□□□□□ -0.15
SND1-213ENST00000486037 PHF14O94880 888 aa14.12□□□□□ -0.15
SND1-213ENST00000486037 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
SND1-213ENST00000486037 UBR3Q6ZT12 1888 aa14.12□□□□□ -0.15
SND1-213ENST00000486037 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
SND1-213ENST00000486037 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
SND1-213ENST00000486037 SBNO2Q9Y2G9 1366 aa14.11□□□□□ -0.15
SND1-213ENST00000486037 HSPA1AP0DMV8 641 aaKnown RBP14.1□□□□□ -0.15
SND1-213ENST00000486037 HSPA1BP0DMV9 641 aaKnown RBP14.1□□□□□ -0.15
SND1-213ENST00000486037 FLAD1Q8NFF5 587 aa14.1□□□□□ -0.15
SND1-213ENST00000486037 ZCRB1Q8TBF4 217 aaKnown RBP14.1□□□□□ -0.15
SND1-213ENST00000486037 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
SND1-213ENST00000486037 IP6K1Q92551 441 aa14.09□□□□□ -0.15
SND1-213ENST00000486037 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
SND1-213ENST00000486037 KCPQ6ZWJ8 1503 aa14.09□□□□□ -0.15
SND1-213ENST00000486037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.08□□□□□ -0.16
SND1-213ENST00000486037 KIF13BQ9NQT8 1826 aa14.08□□□□□ -0.16
SND1-213ENST00000486037 A0A0G2JLW4 131 aa14.07□□□□□ -0.16
SND1-213ENST00000486037 FBLN1P23142 703 aa14.07□□□□□ -0.16
SND1-213ENST00000486037 FSTL1Q12841 308 aa14.07□□□□□ -0.16
SND1-213ENST00000486037 ARHGAP27Q6ZUM4 889 aa14.07□□□□□ -0.16
SND1-213ENST00000486037 AK7Q96M32 723 aa14.07□□□□□ -0.16
SND1-213ENST00000486037 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
SND1-213ENST00000486037 C16orf71Q8IYS4 520 aaPredicted RBP14.05□□□□□ -0.16
SND1-213ENST00000486037 USHBP1Q8N6Y0 703 aa14.05□□□□□ -0.16
SND1-213ENST00000486037 PKD1L3Q7Z443 1732 aa14.04□□□□□ -0.16
SND1-213ENST00000486037 MMP10P09238 476 aa14.04□□□□□ -0.16
SND1-213ENST00000486037 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
SND1-213ENST00000486037 RRAGCQ9HB90 399 aa14.04□□□□□ -0.16
SND1-213ENST00000486037 BRCA1P38398 1863 aaKnown RBP14.04□□□□□ -0.16
SND1-213ENST00000486037 DPEP1P16444 411 aa14.03□□□□□ -0.16
SND1-213ENST00000486037 HOXC9P31274 260 aa14.03□□□□□ -0.16
SND1-213ENST00000486037 MPRIPQ6WCQ1 1025 aa14.03□□□□□ -0.16
SND1-213ENST00000486037 MAP3K19Q56UN5 1328 aa14.03□□□□□ -0.16
SND1-213ENST00000486037 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
SND1-213ENST00000486037 C10orf71Q711Q0 1435 aa14.02□□□□□ -0.16
SND1-213ENST00000486037 NBPF6Q5VWK0 638 aa14.02□□□□□ -0.17
SND1-213ENST00000486037 NBPF4Q96M43 638 aa14.02□□□□□ -0.17
SND1-213ENST00000486037 ITGB4P16144 1822 aa14.01□□□□□ -0.17
SND1-213ENST00000486037 FCHSD2O94868 740 aa14.01□□□□□ -0.17
SND1-213ENST00000486037 SSFA2P28290 1259 aa14.01□□□□□ -0.17
SND1-213ENST00000486037 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
SND1-213ENST00000486037 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
SND1-213ENST00000486037 KCNA3P22001 575 aa14□□□□□ -0.17
SND1-213ENST00000486037 TGFB2P61812 414 aa14□□□□□ -0.17
SND1-213ENST00000486037 SLC12A5Q9H2X9 1139 aa14□□□□□ -0.17
SND1-213ENST00000486037 TNRC6CQ9HCJ0 1690 aaKnown RBP13.99□□□□□ -0.17
SND1-213ENST00000486037 CYP27B1O15528 508 aa13.99□□□□□ -0.17
SND1-213ENST00000486037 ITPK1Q13572 414 aa13.99□□□□□ -0.17
SND1-213ENST00000486037 PIGBQ92521 554 aa13.99□□□□□ -0.17
SND1-213ENST00000486037 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
SND1-213ENST00000486037 GNPATO15228 680 aa13.98□□□□□ -0.17
SND1-213ENST00000486037 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
SND1-213ENST00000486037 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
SND1-213ENST00000486037 RNF181Q9P0P0 153 aa13.98□□□□□ -0.17
SND1-213ENST00000486037 ARFGEF1Q9Y6D6 1849 aa13.98□□□□□ -0.17
SND1-213ENST00000486037 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
SND1-213ENST00000486037 KDM2BQ8NHM5 1336 aa13.97□□□□□ -0.17
SND1-213ENST00000486037 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
SND1-213ENST00000486037 AMPHP49418 695 aa13.96□□□□□ -0.17
SND1-213ENST00000486037 SIK1P57059 783 aa13.96□□□□□ -0.17
SND1-213ENST00000486037 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms