RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.42
SRGAP3-207ENST00000485983 FGD6Q6ZV73 1430 aa12.46□□□□□ -0.42
SRGAP3-207ENST00000485983 AKAP2Q9Y2D5 859 aa12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 FAM43AQ8N2R8 423 aa12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 KRT32Q14532 448 aa12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
SRGAP3-207ENST00000485983 CETN2P41208 172 aa12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 AXDND1Q5T1B0 1012 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 SLF2Q8IX21 1173 aa12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 PTCD1O75127 700 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 NASPP49321 788 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 RPGRQ92834 1020 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 TSPY26PQ9H489 355 aa12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 IMMTQ16891 758 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 RPGRIP1LQ68CZ1 1315 aa12.44□□□□□ -0.42
SRGAP3-207ENST00000485983 KRT85P78386 507 aa12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 DZIP1Q86YF9 867 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 SSR1P43307 286 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 PDZRN3Q9UPQ7 1066 aa12.43□□□□□ -0.42
SRGAP3-207ENST00000485983 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 PDE3AQ14432 1141 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 HSP90AB3PQ58FF7 597 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 MAP4K4O95819 1239 aaPredicted RBP12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 CUL5Q93034 780 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 RAPGEF3O95398 923 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 ATF7IPQ6VMQ6 1270 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 TNMDQ9H2S6 317 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 WDR33Q9C0J8 1336 aaKnown RBP12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 CCDC192P0DO97 292 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 TSPYL1Q9H0U9 437 aa12.42□□□□□ -0.42
SRGAP3-207ENST00000485983 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 CWC15Q9P013 229 aaKnown RBP12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 MRE11P49959 708 aa12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 RRS1Q15050 365 aaKnown RBP12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 EHMT1Q9H9B1 1298 aa12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 CFAP45Q9UL16 551 aa12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
SRGAP3-207ENST00000485983 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 JAKMIP3Q5VZ66 844 aa12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 EXOC5O00471 708 aa12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 CCDC96Q2M329 555 aa12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 CCDC112Q8NEF3 446 aa12.4□□□□□ -0.42
SRGAP3-207ENST00000485983 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.43
SRGAP3-207ENST00000485983 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 NUDT16Q96DE0 195 aaKnown RBP12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 TAF4BQ92750 862 aa12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 FCHSD2O94868 740 aa12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 ANAPC15P60006 121 aa12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 MPRIPQ6WCQ1 1025 aa12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 TAX1BP1Q86VP1 789 aa12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 JAKMIP1Q96N16 626 aaKnown RBP12.39□□□□□ -0.43
SRGAP3-207ENST00000485983 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 C6orf229H3BNL8 230 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 PDIA4P13667 645 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 IQCEQ6IPM2 695 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 CWC27Q6UX04 472 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 CCDC150Q8NCX0 1101 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 BCAR3O75815 825 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 CTCFLQ8NI51 663 aaPredicted RBP12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 SLC5A1P13866 664 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 GRM1Q13255 1194 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 FEZ1Q99689 392 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 NAPBQ9H115 298 aa12.38□□□□□ -0.43
SRGAP3-207ENST00000485983 SPATA32Q96LK8 384 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms