RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 AEBP1Q8IUX7 1158 aa15.93■□□□□ 0.14
HPS4-214ENST00000485842 ZCRB1Q8TBF4 217 aaKnown RBP15.93■□□□□ 0.14
HPS4-214ENST00000485842 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
HPS4-214ENST00000485842 SULT6B1Q6IMI4 303 aa15.92■□□□□ 0.14
HPS4-214ENST00000485842 HMOX1P09601 288 aa15.91■□□□□ 0.14
HPS4-214ENST00000485842 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
HPS4-214ENST00000485842 MYBBP1AQ9BQG0 1328 aaKnown RBP15.91■□□□□ 0.14
HPS4-214ENST00000485842 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
HPS4-214ENST00000485842 TRIM37O94972 964 aa15.9■□□□□ 0.14
HPS4-214ENST00000485842 SF3B2Q13435 895 aaKnown RBP15.9■□□□□ 0.14
HPS4-214ENST00000485842 PRKRIP1Q9H875 184 aaPredicted RBP15.9■□□□□ 0.14
HPS4-214ENST00000485842 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
HPS4-214ENST00000485842 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
HPS4-214ENST00000485842 KDRP35968 1356 aa15.89■□□□□ 0.13
HPS4-214ENST00000485842 EP400Q96L91 3159 aa15.89■□□□□ 0.13
HPS4-214ENST00000485842 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
HPS4-214ENST00000485842 SPG7Q9UQ90 795 aa15.88■□□□□ 0.13
HPS4-214ENST00000485842 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
HPS4-214ENST00000485842 KAT6BQ8WYB5 2073 aa15.88■□□□□ 0.13
HPS4-214ENST00000485842 NHSQ6T4R5 1651 aa15.87■□□□□ 0.13
HPS4-214ENST00000485842 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
HPS4-214ENST00000485842 BCL9O00512 1426 aa15.86■□□□□ 0.13
HPS4-214ENST00000485842 CYP27B1O15528 508 aa15.86■□□□□ 0.13
HPS4-214ENST00000485842 CCDC125Q86Z20 511 aa15.86■□□□□ 0.13
HPS4-214ENST00000485842 U2AF1L5P0DN76 240 aaPredicted RBP15.85■□□□□ 0.13
HPS4-214ENST00000485842 U2AF1Q01081 240 aaKnown RBP eCLIP15.85■□□□□ 0.136e-11■■■■□ 21.2
HPS4-214ENST00000485842 PLEKHO1Q53GL0 409 aaPredicted RBP15.85■□□□□ 0.13
HPS4-214ENST00000485842 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.13
HPS4-214ENST00000485842 PLEKHG2Q9H7P9 1386 aa15.85■□□□□ 0.13
HPS4-214ENST00000485842 ANP32CO43423 234 aa15.84■□□□□ 0.13
HPS4-214ENST00000485842 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
HPS4-214ENST00000485842 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
HPS4-214ENST00000485842 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
HPS4-214ENST00000485842 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
HPS4-214ENST00000485842 APBA3O96018 575 aa15.83■□□□□ 0.12
HPS4-214ENST00000485842 BAG6P46379 1132 aa15.83■□□□□ 0.12
HPS4-214ENST00000485842 AMOTQ4VCS5 1084 aa15.83■□□□□ 0.12
HPS4-214ENST00000485842 SYTL4Q96C24 671 aaPredicted RBP15.83■□□□□ 0.12
HPS4-214ENST00000485842 BTAF1O14981 1849 aa15.82■□□□□ 0.12
HPS4-214ENST00000485842 KCNQ2O43526 872 aa15.82■□□□□ 0.12
HPS4-214ENST00000485842 PHKG2P15735 406 aa15.82■□□□□ 0.12
HPS4-214ENST00000485842 IFNL2Q8IZJ0 200 aa15.82■□□□□ 0.12
HPS4-214ENST00000485842 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
HPS4-214ENST00000485842 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
HPS4-214ENST00000485842 EN1Q05925 392 aaPredicted RBP15.81■□□□□ 0.12
HPS4-214ENST00000485842 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
HPS4-214ENST00000485842 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
HPS4-214ENST00000485842 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
HPS4-214ENST00000485842 ITGB4P16144 1822 aa15.79■□□□□ 0.12
HPS4-214ENST00000485842 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
HPS4-214ENST00000485842 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
HPS4-214ENST00000485842 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.12
HPS4-214ENST00000485842 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.12
HPS4-214ENST00000485842 FCHSD2O94868 740 aa15.77■□□□□ 0.12
HPS4-214ENST00000485842 HSP90AB1P08238 724 aaKnown RBP15.77■□□□□ 0.12
HPS4-214ENST00000485842 WDR43Q15061 677 aaKnown RBP eCLIP15.77■□□□□ 0.12
HPS4-214ENST00000485842 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
HPS4-214ENST00000485842 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.11
HPS4-214ENST00000485842 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
HPS4-214ENST00000485842 MPRIPQ6WCQ1 1025 aa15.76■□□□□ 0.11
HPS4-214ENST00000485842 DCAF5Q96JK2 942 aa15.76■□□□□ 0.11
HPS4-214ENST00000485842 PHACTR3Q96KR7 559 aa15.76■□□□□ 0.11
HPS4-214ENST00000485842 RREB1Q92766 1687 aa15.76■□□□□ 0.11
HPS4-214ENST00000485842 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
HPS4-214ENST00000485842 NEFMP07197 916 aa15.75■□□□□ 0.11
HPS4-214ENST00000485842 AKAP4Q5JQC9 854 aa15.75■□□□□ 0.11
HPS4-214ENST00000485842 GAS2L2Q8NHY3 880 aa15.75■□□□□ 0.11
HPS4-214ENST00000485842 CAMKK2Q96RR4 588 aa15.75■□□□□ 0.11
HPS4-214ENST00000485842 CCDC184Q52MB2 194 aa15.74■□□□□ 0.11
HPS4-214ENST00000485842 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
HPS4-214ENST00000485842 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
HPS4-214ENST00000485842 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
HPS4-214ENST00000485842 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
HPS4-214ENST00000485842 PLSCR1O15162 318 aa15.72■□□□□ 0.11
HPS4-214ENST00000485842 PIGBQ92521 554 aa15.72■□□□□ 0.11
HPS4-214ENST00000485842 MRS2Q9HD23 443 aa15.72■□□□□ 0.11
HPS4-214ENST00000485842 GNAT3A8MTJ3 354 aa15.71■□□□□ 0.11
HPS4-214ENST00000485842 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
HPS4-214ENST00000485842 CABP4P57796 275 aa15.71■□□□□ 0.11
HPS4-214ENST00000485842 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
HPS4-214ENST00000485842 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
HPS4-214ENST00000485842 DLG5Q8TDM6 1919 aa15.7■□□□□ 0.1
HPS4-214ENST00000485842 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
HPS4-214ENST00000485842 ERVV-2B6SEH9 535 aa15.7■□□□□ 0.1
HPS4-214ENST00000485842 PLEKHF1Q96S99 279 aa15.7■□□□□ 0.1
HPS4-214ENST00000485842 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
HPS4-214ENST00000485842 LY75O60449 1722 aa15.7■□□□□ 0.1
HPS4-214ENST00000485842 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
HPS4-214ENST00000485842 ADAMTS8Q9UP79 889 aa15.69■□□□□ 0.1
HPS4-214ENST00000485842 PALLDQ8WX93 1383 aa15.69■□□□□ 0.1
HPS4-214ENST00000485842 MRC1P22897 1456 aa15.69■□□□□ 0.1
HPS4-214ENST00000485842 PROM2Q8N271 834 aa15.68■□□□□ 0.1
HPS4-214ENST00000485842 NFE2L2Q16236 605 aa15.67■□□□□ 0.1
HPS4-214ENST00000485842 DIEXFQ68CQ4 756 aaKnown RBP15.67■□□□□ 0.1
HPS4-214ENST00000485842 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
HPS4-214ENST00000485842 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
HPS4-214ENST00000485842 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
HPS4-214ENST00000485842 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
HPS4-214ENST00000485842 KCNQ4P56696 695 aa15.66■□□□□ 0.1
HPS4-214ENST00000485842 TEFQ10587 303 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms