RNA–Protein interactions for RNA: ENST00000485743.1

HBB-204, Transcript of hemoglobin subunit beta, humanhuman

TSL 1 (best)

Gene HBB, Length 680 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-204ENST00000485743 CICQ96RK0 1608 aaPredicted RBP19.43■□□□□ 0.7
HBB-204ENST00000485743 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
HBB-204ENST00000485743 CCNL1Q9UK58 526 aaPredicted RBP19.43■□□□□ 0.7
HBB-204ENST00000485743 NSD2O96028 1365 aa19.43■□□□□ 0.7
HBB-204ENST00000485743 PRIM1P49642 420 aaKnown RBP19.42■□□□□ 0.7
HBB-204ENST00000485743 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
HBB-204ENST00000485743 SYTL4Q96C24 671 aaPredicted RBP19.42■□□□□ 0.7
HBB-204ENST00000485743 LTN1O94822 1766 aa19.41■□□□□ 0.7
HBB-204ENST00000485743 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
HBB-204ENST00000485743 CENPJQ9HC77 1338 aaPredicted RBP19.4■□□□□ 0.7
HBB-204ENST00000485743 C5P01031 1676 aa19.4■□□□□ 0.7
HBB-204ENST00000485743 NMRK2Q9NPI5 230 aa19.39■□□□□ 0.69
HBB-204ENST00000485743 TTC21AQ8NDW8 1320 aa19.39■□□□□ 0.69
HBB-204ENST00000485743 USP54Q70EL1 1684 aa19.38■□□□□ 0.69
HBB-204ENST00000485743 RBM46Q8TBY0 533 aaKnown RBP19.38■□□□□ 0.69
HBB-204ENST00000485743 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
HBB-204ENST00000485743 ANKRD24Q8TF21 1146 aa19.37■□□□□ 0.69
HBB-204ENST00000485743 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
HBB-204ENST00000485743 TAF1LQ8IZX4 1826 aa19.36■□□□□ 0.69
HBB-204ENST00000485743 FLAD1Q8NFF5 587 aa19.34■□□□□ 0.69
HBB-204ENST00000485743 FSTL1Q12841 308 aa19.32■□□□□ 0.68
HBB-204ENST00000485743 USP47Q96K76 1375 aa19.32■□□□□ 0.68
HBB-204ENST00000485743 TOGARAM1Q9Y4F4 1720 aa19.31■□□□□ 0.68
HBB-204ENST00000485743 USP31Q70CQ4 1352 aa19.3■□□□□ 0.68
HBB-204ENST00000485743 MON2Q7Z3U7 1717 aa19.29■□□□□ 0.68
HBB-204ENST00000485743 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
HBB-204ENST00000485743 FAM208AQ9UK61 1670 aaKnown RBP19.29■□□□□ 0.68
HBB-204ENST00000485743 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
HBB-204ENST00000485743 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
HBB-204ENST00000485743 KIAA1551Q9HCM1 1747 aa19.28■□□□□ 0.68
HBB-204ENST00000485743 HSPA1AP0DMV8 641 aaKnown RBP19.28■□□□□ 0.68
HBB-204ENST00000485743 HSPA1BP0DMV9 641 aaKnown RBP19.28■□□□□ 0.68
HBB-204ENST00000485743 AMIGO3Q86WK7 504 aa19.28■□□□□ 0.68
HBB-204ENST00000485743 EVC2Q86UK5 1308 aa19.27■□□□□ 0.68
HBB-204ENST00000485743 N4BP2Q86UW6 1770 aaPredicted RBP19.27■□□□□ 0.68
HBB-204ENST00000485743 C4BP0C0L5 1744 aa19.27■□□□□ 0.68
HBB-204ENST00000485743 KIF13BQ9NQT8 1826 aa19.27■□□□□ 0.68
HBB-204ENST00000485743 PXDNLA1KZ92 1463 aa19.25■□□□□ 0.67
HBB-204ENST00000485743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
HBB-204ENST00000485743 SMIM5Q71RC9 77 aa19.24■□□□□ 0.67
HBB-204ENST00000485743 ZCRB1Q8TBF4 217 aaKnown RBP19.24■□□□□ 0.67
HBB-204ENST00000485743 RAB3GAP2Q9H2M9 1393 aa19.23■□□□□ 0.67
HBB-204ENST00000485743 ARHGAP27Q6ZUM4 889 aa19.23■□□□□ 0.67
HBB-204ENST00000485743 NME9Q86XW9 330 aa19.23■□□□□ 0.67
HBB-204ENST00000485743 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
HBB-204ENST00000485743 PKD1L3Q7Z443 1732 aa19.22■□□□□ 0.67
HBB-204ENST00000485743 RGPD2P0DJD1 1756 aa19.22■□□□□ 0.67
HBB-204ENST00000485743 PHF14O94880 888 aa19.22■□□□□ 0.67
HBB-204ENST00000485743 HMGB2P26583 209 aaKnown RBP19.22■□□□□ 0.67
HBB-204ENST00000485743 MEGF6O75095 1541 aa19.21■□□□□ 0.67
HBB-204ENST00000485743 KCPQ6ZWJ8 1503 aa19.21■□□□□ 0.67
HBB-204ENST00000485743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.21■□□□□ 0.67
HBB-204ENST00000485743 LTV1Q96GA3 475 aaPredicted RBP19.21■□□□□ 0.67
HBB-204ENST00000485743 AK7Q96M32 723 aa19.21■□□□□ 0.67
HBB-204ENST00000485743 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
HBB-204ENST00000485743 C10orf71Q711Q0 1435 aa19.2■□□□□ 0.66
HBB-204ENST00000485743 IP6K1Q92551 441 aa19.2■□□□□ 0.66
HBB-204ENST00000485743 PCDH10Q9P2E7 1040 aa19.2■□□□□ 0.66
HBB-204ENST00000485743 BRCA1P38398 1863 aaKnown RBP19.2■□□□□ 0.66
HBB-204ENST00000485743 PLEKHG2Q9H7P9 1386 aa19.19■□□□□ 0.66
HBB-204ENST00000485743 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
HBB-204ENST00000485743 TNRC6CQ9HCJ0 1690 aaKnown RBP19.19■□□□□ 0.66
HBB-204ENST00000485743 A0A0G2JLW4 131 aa19.18■□□□□ 0.66
HBB-204ENST00000485743 TGFB2P61812 414 aa19.18■□□□□ 0.66
HBB-204ENST00000485743 RRAGCQ9HB90 399 aa19.18■□□□□ 0.66
HBB-204ENST00000485743 SBNO2Q9Y2G9 1366 aa19.18■□□□□ 0.66
HBB-204ENST00000485743 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
HBB-204ENST00000485743 SMC1BQ8NDV3 1235 aa19.17■□□□□ 0.66
HBB-204ENST00000485743 KDM2BQ8NHM5 1336 aa19.17■□□□□ 0.66
HBB-204ENST00000485743 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
HBB-204ENST00000485743 SSFA2P28290 1259 aa19.16■□□□□ 0.66
HBB-204ENST00000485743 MMP10P09238 476 aa19.15■□□□□ 0.66
HBB-204ENST00000485743 CD163L1Q9NR16 1453 aa19.15■□□□□ 0.66
HBB-204ENST00000485743 ITGB4P16144 1822 aa19.14■□□□□ 0.65
HBB-204ENST00000485743 FCHSD2O94868 740 aa19.14■□□□□ 0.65
HBB-204ENST00000485743 MPRIPQ6WCQ1 1025 aa19.13■□□□□ 0.65
HBB-204ENST00000485743 SBF1O95248 1867 aa19.12■□□□□ 0.65
HBB-204ENST00000485743 MAP2P11137 1827 aaKnown RBP19.12■□□□□ 0.65
HBB-204ENST00000485743 DPEP1P16444 411 aa19.12■□□□□ 0.65
HBB-204ENST00000485743 SMARCC1Q92922 1105 aaPredicted RBP19.1■□□□□ 0.65
HBB-204ENST00000485743 CGNL1Q0VF96 1302 aa19.09■□□□□ 0.65
HBB-204ENST00000485743 LINC00116Q8NCU8 138 aa19.09■□□□□ 0.65
HBB-204ENST00000485743 RNF181Q9P0P0 153 aa19.09■□□□□ 0.65
HBB-204ENST00000485743 HOXC9P31274 260 aa19.08■□□□□ 0.64
HBB-204ENST00000485743 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
HBB-204ENST00000485743 KCNA3P22001 575 aa19.07■□□□□ 0.64
HBB-204ENST00000485743 EDC4Q6P2E9 1401 aaKnown RBP19.07■□□□□ 0.64
HBB-204ENST00000485743 C4AP0C0L4 1744 aa19.06■□□□□ 0.64
HBB-204ENST00000485743 GNPATO15228 680 aa19.06■□□□□ 0.64
HBB-204ENST00000485743 NBPF6Q5VWK0 638 aa19.06■□□□□ 0.64
HBB-204ENST00000485743 NBPF4Q96M43 638 aa19.06■□□□□ 0.64
HBB-204ENST00000485743 USHBP1Q8N6Y0 703 aa19.05■□□□□ 0.64
HBB-204ENST00000485743 DCAF5Q96JK2 942 aa19.05■□□□□ 0.64
HBB-204ENST00000485743 PCDH11XQ9BZA7 1347 aa19.04■□□□□ 0.64
HBB-204ENST00000485743 PCDH11YQ9BZA8 1340 aa19.04■□□□□ 0.64
HBB-204ENST00000485743 FAM161AQ3B820 660 aa19.04■□□□□ 0.64
HBB-204ENST00000485743 RAPGEF4Q8WZA2 1011 aa19.04■□□□□ 0.64
HBB-204ENST00000485743 PIGBQ92521 554 aa19.04■□□□□ 0.64
HBB-204ENST00000485743 LOC102724428A0A0B4J2F2 783 aa19.03■□□□□ 0.64
HBB-204ENST00000485743 FOXN1O15353 648 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms