RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TOGARAM1Q9Y4F4 1720 aa18.58■□□□□ 0.57
UBA3-210ENST00000485424 TESK2Q96S53 571 aa18.58■□□□□ 0.56
UBA3-210ENST00000485424 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
UBA3-210ENST00000485424 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
UBA3-210ENST00000485424 IP6K1Q92551 441 aa18.57■□□□□ 0.56
UBA3-210ENST00000485424 SGIP1Q9BQI5 828 aa18.57■□□□□ 0.56
UBA3-210ENST00000485424 MTFR1LQ9H019 292 aa18.57■□□□□ 0.56
UBA3-210ENST00000485424 MEGF6O75095 1541 aa18.57■□□□□ 0.56
UBA3-210ENST00000485424 TMF1P82094 1093 aa18.55■□□□□ 0.56
UBA3-210ENST00000485424 ZNF827Q17R98 1081 aa18.55■□□□□ 0.56
UBA3-210ENST00000485424 COG3Q96JB2 828 aa18.55■□□□□ 0.56
UBA3-210ENST00000485424 FHDC1Q9C0D6 1143 aaPredicted RBP18.55■□□□□ 0.56
UBA3-210ENST00000485424 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
UBA3-210ENST00000485424 MAP3K19Q56UN5 1328 aa18.54■□□□□ 0.56
UBA3-210ENST00000485424 LTV1Q96GA3 475 aaPredicted RBP18.54■□□□□ 0.56
UBA3-210ENST00000485424 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
UBA3-210ENST00000485424 RTL1A6NKG5 1358 aa18.53■□□□□ 0.56
UBA3-210ENST00000485424 USP47Q96K76 1375 aa18.53■□□□□ 0.56
UBA3-210ENST00000485424 HOXC9P31274 260 aa18.52■□□□□ 0.56
UBA3-210ENST00000485424 SYT17Q9BSW7 474 aa18.52■□□□□ 0.56
UBA3-210ENST00000485424 NSD2O96028 1365 aa18.52■□□□□ 0.55
UBA3-210ENST00000485424 MAP3K5Q99683 1374 aa18.52■□□□□ 0.55
UBA3-210ENST00000485424 UBR3Q6ZT12 1888 aa18.52■□□□□ 0.55
UBA3-210ENST00000485424 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
UBA3-210ENST00000485424 DDX54Q8TDD1 881 aaKnown RBP18.51■□□□□ 0.55
UBA3-210ENST00000485424 FBLN1P23142 703 aa18.5■□□□□ 0.55
UBA3-210ENST00000485424 AMPHP49418 695 aa18.5■□□□□ 0.55
UBA3-210ENST00000485424 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
UBA3-210ENST00000485424 ARXQ96QS3 562 aa18.49■□□□□ 0.55
UBA3-210ENST00000485424 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
UBA3-210ENST00000485424 PCGF6Q9BYE7 350 aa18.47■□□□□ 0.55
UBA3-210ENST00000485424 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
UBA3-210ENST00000485424 SMG6Q86US8 1419 aaKnown RBP18.46■□□□□ 0.55
UBA3-210ENST00000485424 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
UBA3-210ENST00000485424 C4BP0C0L5 1744 aa18.46■□□□□ 0.55
UBA3-210ENST00000485424 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
UBA3-210ENST00000485424 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
UBA3-210ENST00000485424 KCNQ4P56696 695 aa18.44■□□□□ 0.54
UBA3-210ENST00000485424 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
UBA3-210ENST00000485424 FYB1O15117 783 aa18.43■□□□□ 0.54
UBA3-210ENST00000485424 ZNF784Q8NCA9 323 aaPredicted RBP18.43■□□□□ 0.54
UBA3-210ENST00000485424 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
UBA3-210ENST00000485424 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
UBA3-210ENST00000485424 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
UBA3-210ENST00000485424 NBPF6Q5VWK0 638 aa18.42■□□□□ 0.54
UBA3-210ENST00000485424 USHBP1Q8N6Y0 703 aa18.42■□□□□ 0.54
UBA3-210ENST00000485424 SLC16A10Q8TF71 515 aa18.42■□□□□ 0.54
UBA3-210ENST00000485424 NBPF4Q96M43 638 aa18.42■□□□□ 0.54
UBA3-210ENST00000485424 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
UBA3-210ENST00000485424 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
UBA3-210ENST00000485424 INSRP06213 1382 aa18.41■□□□□ 0.54
UBA3-210ENST00000485424 FLT4P35916 1363 aa18.41■□□□□ 0.54
UBA3-210ENST00000485424 TFCP2L1Q9NZI6 479 aa18.4■□□□□ 0.54
UBA3-210ENST00000485424 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
UBA3-210ENST00000485424 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
UBA3-210ENST00000485424 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
UBA3-210ENST00000485424 POLD1P28340 1107 aa18.38■□□□□ 0.53
UBA3-210ENST00000485424 HSP90AB2PQ58FF8 381 aa18.37■□□□□ 0.53
UBA3-210ENST00000485424 KLHL34Q8N239 644 aa18.37■□□□□ 0.53
UBA3-210ENST00000485424 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
UBA3-210ENST00000485424 POLR3GLQ9BT43 218 aa18.37■□□□□ 0.53
UBA3-210ENST00000485424 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
UBA3-210ENST00000485424 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
UBA3-210ENST00000485424 NSD3Q9BZ95 1437 aa18.37■□□□□ 0.53
UBA3-210ENST00000485424 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
UBA3-210ENST00000485424 KIF13BQ9NQT8 1826 aa18.35■□□□□ 0.53
UBA3-210ENST00000485424 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
UBA3-210ENST00000485424 GPR162Q16538 588 aa18.34■□□□□ 0.53
UBA3-210ENST00000485424 NLGN2Q8NFZ4 835 aa18.34■□□□□ 0.53
UBA3-210ENST00000485424 ZNF831Q5JPB2 1677 aa18.34■□□□□ 0.53
UBA3-210ENST00000485424 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
UBA3-210ENST00000485424 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
UBA3-210ENST00000485424 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
UBA3-210ENST00000485424 EMILIN1Q9Y6C2 1016 aa18.32■□□□□ 0.52
UBA3-210ENST00000485424 CEP350Q5VT06 3117 aa18.31■□□□□ 0.52
UBA3-210ENST00000485424 CYP27B1O15528 508 aa18.31■□□□□ 0.52
UBA3-210ENST00000485424 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
UBA3-210ENST00000485424 C4AP0C0L4 1744 aa18.31■□□□□ 0.52
UBA3-210ENST00000485424 KIAA1551Q9HCM1 1747 aa18.31■□□□□ 0.52
UBA3-210ENST00000485424 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
UBA3-210ENST00000485424 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
UBA3-210ENST00000485424 PPM1GO15355 546 aaPredicted RBP18.3■□□□□ 0.52
UBA3-210ENST00000485424 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
UBA3-210ENST00000485424 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
UBA3-210ENST00000485424 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
UBA3-210ENST00000485424 MYH14Q7Z406 1995 aaKnown RBP18.29■□□□□ 0.52
UBA3-210ENST00000485424 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
UBA3-210ENST00000485424 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.52
UBA3-210ENST00000485424 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.52
UBA3-210ENST00000485424 YBX3P16989 372 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBA3-210ENST00000485424 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
UBA3-210ENST00000485424 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
UBA3-210ENST00000485424 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
UBA3-210ENST00000485424 AMIGO3Q86WK7 504 aa18.23■□□□□ 0.51
UBA3-210ENST00000485424 SMARCC1Q92922 1105 aaPredicted RBP18.23■□□□□ 0.51
UBA3-210ENST00000485424 ARFGEF1Q9Y6D6 1849 aa18.22■□□□□ 0.51
UBA3-210ENST00000485424 HMGB2P26583 209 aaKnown RBP18.22■□□□□ 0.51
UBA3-210ENST00000485424 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
UBA3-210ENST00000485424 PIGBQ92521 554 aa18.22■□□□□ 0.51
UBA3-210ENST00000485424 CICQ96RK0 1608 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms