RNA–Protein interactions for RNA: ENST00000485324.1

SLC6A8-210, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 2,401 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-210ENST00000485324 FMN2Q9NZ56 1722 aa25.37■■□□□ 1.65
SLC6A8-210ENST00000485324 KIF24Q5T7B8 1368 aa25.37■■□□□ 1.65
SLC6A8-210ENST00000485324 KIAA0232Q92628 1395 aa25.37■■□□□ 1.65
SLC6A8-210ENST00000485324 ATP10DQ9P241 1426 aa25.37■■□□□ 1.65
SLC6A8-210ENST00000485324 DCTPP1Q9H773 170 aa25.36■■□□□ 1.65
SLC6A8-210ENST00000485324 CHMP5Q9NZZ3 219 aa25.36■■□□□ 1.65
SLC6A8-210ENST00000485324 NUTM2GQ5VZR2 741 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 PLEKHM2Q8IWE5 1019 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 MEIS3Q99687 375 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 TTC21AQ8NDW8 1320 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 ARHGEF10O15013 1369 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 DIP2AQ14689 1571 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 SLC4A2P04920 1241 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 EYA1Q99502 592 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 TBX22Q9Y458 520 aa25.35■■□□□ 1.65
SLC6A8-210ENST00000485324 OTUD7AQ8TE49 926 aaPredicted RBP25.34■■□□□ 1.65
SLC6A8-210ENST00000485324 CEP170BQ9Y4F5 1589 aaPredicted RBP25.34■■□□□ 1.65
SLC6A8-210ENST00000485324 AMPHP49418 695 aa25.34■■□□□ 1.65
SLC6A8-210ENST00000485324 G2E3Q7L622 706 aa25.34■■□□□ 1.65
SLC6A8-210ENST00000485324 ANKRD44Q8N8A2 993 aa25.34■■□□□ 1.65
SLC6A8-210ENST00000485324 ARHGAP23Q9P227 1491 aa25.33■■□□□ 1.65
SLC6A8-210ENST00000485324 SBNO1A3KN83 1393 aa25.33■■□□□ 1.65
SLC6A8-210ENST00000485324 FLT4P35916 1363 aa25.33■■□□□ 1.65
SLC6A8-210ENST00000485324 APBB1O00213 710 aa25.33■■□□□ 1.65
SLC6A8-210ENST00000485324 CD2BP2O95400 341 aaKnown RBP25.33■■□□□ 1.65
SLC6A8-210ENST00000485324 CEP85Q6P2H3 762 aa25.33■■□□□ 1.65
SLC6A8-210ENST00000485324 SLIT1O75093 1534 aa25.33■■□□□ 1.65
SLC6A8-210ENST00000485324 MCM4P33991 863 aa25.33■■□□□ 1.64
SLC6A8-210ENST00000485324 RBM42Q9BTD8 480 aaKnown RBP25.33■■□□□ 1.64
SLC6A8-210ENST00000485324 TSPYL4Q9UJ04 414 aa25.33■■□□□ 1.64
SLC6A8-210ENST00000485324 PIK3C2AO00443 1686 aa25.32■■□□□ 1.64
SLC6A8-210ENST00000485324 RTL1A6NKG5 1358 aa25.31■■□□□ 1.64
SLC6A8-210ENST00000485324 SMARCA5O60264 1052 aaPredicted RBP25.31■■□□□ 1.64
SLC6A8-210ENST00000485324 RTF1Q92541 710 aaKnown RBP25.31■■□□□ 1.64
SLC6A8-210ENST00000485324 SNX21Q969T3 373 aa25.31■■□□□ 1.64
SLC6A8-210ENST00000485324 F6X3S4 739 aa25.31■■□□□ 1.64
SLC6A8-210ENST00000485324 HAP1P54257 671 aaPredicted RBP25.3■■□□□ 1.64
SLC6A8-210ENST00000485324 NCOA3Q9Y6Q9 1424 aa25.3■■□□□ 1.64
SLC6A8-210ENST00000485324 PTPRCP08575 1304 aa25.3■■□□□ 1.64
SLC6A8-210ENST00000485324 NLRP6P59044 892 aa25.29■■□□□ 1.64
SLC6A8-210ENST00000485324 CDC45O75419 566 aa25.29■■□□□ 1.64
SLC6A8-210ENST00000485324 KDRP35968 1356 aa25.29■■□□□ 1.64
SLC6A8-210ENST00000485324 IGSF1Q8N6C5 1336 aa25.28■■□□□ 1.64
SLC6A8-210ENST00000485324 DDIT3P35638 169 aa25.28■■□□□ 1.64
SLC6A8-210ENST00000485324 SLC4A10Q6U841 1118 aa25.28■■□□□ 1.64
SLC6A8-210ENST00000485324 KCNA6P17658 529 aa25.27■■□□□ 1.64
SLC6A8-210ENST00000485324 TTC22Q5TAA0 569 aa25.27■■□□□ 1.64
SLC6A8-210ENST00000485324 RPAP2Q8IXW5 612 aaPredicted RBP25.27■■□□□ 1.64
SLC6A8-210ENST00000485324 FOXD4L1Q9NU39 408 aa25.27■■□□□ 1.64
SLC6A8-210ENST00000485324 HSP90AB1P08238 724 aaKnown RBP25.26■■□□□ 1.63
SLC6A8-210ENST00000485324 THEMISQ8N1K5 641 aaPredicted RBP25.25■■□□□ 1.63
SLC6A8-210ENST00000485324 GZF1Q9H116 711 aaPredicted RBP25.25■■□□□ 1.63
SLC6A8-210ENST00000485324 ARXQ96QS3 562 aa25.24■■□□□ 1.63
SLC6A8-210ENST00000485324 FER1L4A9Z1Z3 1794 aa25.24■■□□□ 1.63
SLC6A8-210ENST00000485324 NECTIN2Q92692 538 aa25.24■■□□□ 1.63
SLC6A8-210ENST00000485324 LTV1Q96GA3 475 aaPredicted RBP25.24■■□□□ 1.63
SLC6A8-210ENST00000485324 HOXC9P31274 260 aa25.22■■□□□ 1.63
SLC6A8-210ENST00000485324 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
SLC6A8-210ENST00000485324 XRN1Q8IZH2 1706 aaKnown RBP25.22■■□□□ 1.63
SLC6A8-210ENST00000485324 MARF1Q9Y4F3 1742 aaKnown RBP25.21■■□□□ 1.63
SLC6A8-210ENST00000485324 SDSP20132 328 aa25.2■■□□□ 1.62
SLC6A8-210ENST00000485324 TRAK2O60296 914 aa25.19■■□□□ 1.62
SLC6A8-210ENST00000485324 ABTB2Q8N961 1025 aa25.19■■□□□ 1.62
SLC6A8-210ENST00000485324 RBM33Q96EV2 1170 aaKnown RBP25.19■■□□□ 1.62
SLC6A8-210ENST00000485324 USHBP1Q8N6Y0 703 aa25.18■■□□□ 1.62
SLC6A8-210ENST00000485324 TNPO1Q92973 898 aaKnown RBP25.18■■□□□ 1.62
SLC6A8-210ENST00000485324 K7ELQ4 463 aaPredicted RBP25.18■■□□□ 1.62
SLC6A8-210ENST00000485324 NWD1Q149M9 1564 aa25.18■■□□□ 1.62
SLC6A8-210ENST00000485324 C14orf37Q86TY3 774 aa25.17■■□□□ 1.62
SLC6A8-210ENST00000485324 GNAT3A8MTJ3 354 aa25.17■■□□□ 1.62
SLC6A8-210ENST00000485324 IL17REQ8NFR9 667 aa25.17■■□□□ 1.62
SLC6A8-210ENST00000485324 HSP90AA1P07900 732 aaKnown RBP25.16■■□□□ 1.62
SLC6A8-210ENST00000485324 CCT4P50991 539 aaKnown RBP25.15■■□□□ 1.62
SLC6A8-210ENST00000485324 STK31Q9BXU1 1019 aa25.15■■□□□ 1.62
SLC6A8-210ENST00000485324 ANKARQ7Z5J8 1434 aa25.14■■□□□ 1.62
SLC6A8-210ENST00000485324 LRRC37A3O60309 1634 aa25.14■■□□□ 1.62
SLC6A8-210ENST00000485324 FLIIQ13045 1269 aa25.14■■□□□ 1.62
SLC6A8-210ENST00000485324 USP26Q9BXU7 913 aa25.14■■□□□ 1.62
SLC6A8-210ENST00000485324 FKBP5Q13451 457 aaPredicted RBP25.14■■□□□ 1.61
SLC6A8-210ENST00000485324 EXOC6BQ9Y2D4 811 aa25.14■■□□□ 1.61
SLC6A8-210ENST00000485324 RAB3GAP1Q15042 981 aa25.12■■□□□ 1.61
SLC6A8-210ENST00000485324 TSHZ3Q63HK5 1081 aa25.12■■□□□ 1.61
SLC6A8-210ENST00000485324 FAM208AQ9UK61 1670 aaKnown RBP25.12■■□□□ 1.61
SLC6A8-210ENST00000485324 HMMRO75330 724 aa25.12■■□□□ 1.61
SLC6A8-210ENST00000485324 SETD1BQ9UPS6 1966 aaKnown RBP25.11■■□□□ 1.61
SLC6A8-210ENST00000485324 HTATSF1O43719 755 aaKnown RBP25.11■■□□□ 1.61
SLC6A8-210ENST00000485324 CIZ1Q9ULV3 898 aaPredicted RBP25.11■■□□□ 1.61
SLC6A8-210ENST00000485324 MAP3K5Q99683 1374 aa25.11■■□□□ 1.61
SLC6A8-210ENST00000485324 GNAI2P04899 355 aa25.11■■□□□ 1.61
SLC6A8-210ENST00000485324 DDX11L8A8MPP1 907 aa25.1■■□□□ 1.61
SLC6A8-210ENST00000485324 CCDC30Q5VVM6 783 aa25.1■■□□□ 1.61
SLC6A8-210ENST00000485324 PNMA6EA0A0J9YXQ4 647 aa25.09■■□□□ 1.61
SLC6A8-210ENST00000485324 L1TD1Q5T7N2 865 aaKnown RBP25.09■■□□□ 1.61
SLC6A8-210ENST00000485324 FSD2A1L4K1 749 aa25.08■■□□□ 1.61
SLC6A8-210ENST00000485324 PDE1AP54750 535 aa25.08■■□□□ 1.61
SLC6A8-210ENST00000485324 AK9Q5TCS8 1911 aa25.08■■□□□ 1.61
SLC6A8-210ENST00000485324 GOLGA6L3A6NEY3 463 aa25.08■■□□□ 1.61
SLC6A8-210ENST00000485324 XRCC6P12956 609 aaKnown RBP eCLIP25.08■■□□□ 1.61
SLC6A8-210ENST00000485324 TAF7Q15545 349 aaPredicted RBP25.07■■□□□ 1.6
SLC6A8-210ENST00000485324 SSFA2P28290 1259 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms