RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 PLCH1Q4KWH8 1693 aa22.83■■□□□ 1.25
CCDC78-214ENST00000485091 E9PSI1 815 aa22.82■■□□□ 1.24
CCDC78-214ENST00000485091 MCM10Q7L590 875 aa22.82■■□□□ 1.24
CCDC78-214ENST00000485091 RTF1Q92541 710 aaKnown RBP22.82■■□□□ 1.24
CCDC78-214ENST00000485091 NGLY1Q96IV0 654 aa22.82■■□□□ 1.24
CCDC78-214ENST00000485091 LAS1LQ9Y4W2 734 aaKnown RBP22.82■■□□□ 1.24
CCDC78-214ENST00000485091 CRB1P82279 1406 aa22.82■■□□□ 1.24
CCDC78-214ENST00000485091 AMOTQ4VCS5 1084 aa22.81■■□□□ 1.24
CCDC78-214ENST00000485091 DUSP27Q5VZP5 1158 aa22.81■■□□□ 1.24
CCDC78-214ENST00000485091 MEGF6O75095 1541 aa22.81■■□□□ 1.24
CCDC78-214ENST00000485091 LRP6O75581 1613 aa22.81■■□□□ 1.24
CCDC78-214ENST00000485091 MEX3CQ5U5Q3 659 aaKnown RBP22.8■■□□□ 1.24
CCDC78-214ENST00000485091 ZNF530Q6P9A1 599 aaPredicted RBP22.8■■□□□ 1.24
CCDC78-214ENST00000485091 GNAT3A8MTJ3 354 aa22.79■■□□□ 1.24
CCDC78-214ENST00000485091 ILDR2Q71H61 639 aa22.78■■□□□ 1.24
CCDC78-214ENST00000485091 MAP3K5Q99683 1374 aa22.78■■□□□ 1.24
CCDC78-214ENST00000485091 TRMT2AQ8IZ69 625 aaKnown RBP22.77■■□□□ 1.24
CCDC78-214ENST00000485091 CCDC9Q9Y3X0 531 aaKnown RBP22.77■■□□□ 1.24
CCDC78-214ENST00000485091 C1orf141Q5JVX7 400 aa22.77■■□□□ 1.23
CCDC78-214ENST00000485091 SLIT2O94813 1529 aa22.76■■□□□ 1.23
CCDC78-214ENST00000485091 IL2RBP14784 551 aa22.76■■□□□ 1.23
CCDC78-214ENST00000485091 CALD1Q05682 793 aaKnown RBP22.76■■□□□ 1.23
CCDC78-214ENST00000485091 TSR2Q969E8 191 aaKnown RBP22.76■■□□□ 1.23
CCDC78-214ENST00000485091 MYH16Q9H6N6 1097 aa22.76■■□□□ 1.23
CCDC78-214ENST00000485091 SPG7Q9UQ90 795 aa22.76■■□□□ 1.23
CCDC78-214ENST00000485091 NRAPQ86VF7 1730 aa22.75■■□□□ 1.23
CCDC78-214ENST00000485091 IL16Q14005 1332 aa22.75■■□□□ 1.23
CCDC78-214ENST00000485091 AKAP4Q5JQC9 854 aa22.75■■□□□ 1.23
CCDC78-214ENST00000485091 HTATSF1O43719 755 aaKnown RBP22.74■■□□□ 1.23
CCDC78-214ENST00000485091 UNC5CLQ8IV45 518 aa22.74■■□□□ 1.23
CCDC78-214ENST00000485091 IL17REQ8NFR9 667 aa22.74■■□□□ 1.23
CCDC78-214ENST00000485091 RGS17Q9UGC6 210 aaPredicted RBP22.74■■□□□ 1.23
CCDC78-214ENST00000485091 MPRIPQ6WCQ1 1025 aa22.73■■□□□ 1.23
CCDC78-214ENST00000485091 SUPT16HQ9Y5B9 1047 aaKnown RBP22.73■■□□□ 1.23
CCDC78-214ENST00000485091 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
CCDC78-214ENST00000485091 OVOS2A0A0G2JMS6 1433 aa22.72■■□□□ 1.23
CCDC78-214ENST00000485091 FANCIQ9NVI1 1328 aa22.72■■□□□ 1.23
CCDC78-214ENST00000485091 LGR6Q9HBX8 967 aa22.71■■□□□ 1.23
CCDC78-214ENST00000485091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.71■■□□□ 1.23
CCDC78-214ENST00000485091 GNAI1P63096 354 aa22.71■■□□□ 1.23
CCDC78-214ENST00000485091 ZCRB1Q8TBF4 217 aaKnown RBP22.71■■□□□ 1.23
CCDC78-214ENST00000485091 IFT57Q9NWB7 429 aa22.71■■□□□ 1.23
CCDC78-214ENST00000485091 USP21Q9UK80 565 aa22.71■■□□□ 1.23
CCDC78-214ENST00000485091 PARP4Q9UKK3 1724 aaKnown RBP22.7■■□□□ 1.23
CCDC78-214ENST00000485091 SPATA31A1Q5TZJ5 1347 aa22.7■■□□□ 1.22
CCDC78-214ENST00000485091 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.22
CCDC78-214ENST00000485091 PHKG2P15735 406 aa22.69■■□□□ 1.22
CCDC78-214ENST00000485091 IFNL2Q8IZJ0 200 aa22.69■■□□□ 1.22
CCDC78-214ENST00000485091 CFAP44Q96MT7 982 aa22.69■■□□□ 1.22
CCDC78-214ENST00000485091 BCL9LQ86UU0 1499 aa22.69■■□□□ 1.22
CCDC78-214ENST00000485091 MBIPQ9NS73 344 aa22.68■■□□□ 1.22
CCDC78-214ENST00000485091 MIS18AQ9NYP9 233 aa22.68■■□□□ 1.22
CCDC78-214ENST00000485091 RCAN3Q9UKA8 241 aa22.68■■□□□ 1.22
CCDC78-214ENST00000485091 SPATA31A5Q5VU36 1347 aa22.68■■□□□ 1.22
CCDC78-214ENST00000485091 SPATA31A7Q8IWB4 1347 aa22.68■■□□□ 1.22
CCDC78-214ENST00000485091 CYP27B1O15528 508 aa22.68■■□□□ 1.22
CCDC78-214ENST00000485091 ZNF853P0CG23 659 aa22.68■■□□□ 1.22
CCDC78-214ENST00000485091 DDX54Q8TDD1 881 aaKnown RBP22.68■■□□□ 1.22
CCDC78-214ENST00000485091 PKD1L3Q7Z443 1732 aa22.67■■□□□ 1.22
CCDC78-214ENST00000485091 RNMTO43148 476 aaKnown RBP22.67■■□□□ 1.22
CCDC78-214ENST00000485091 EXOSC9Q06265 439 aaKnown RBP22.67■■□□□ 1.22
CCDC78-214ENST00000485091 AFF2P51816 1311 aa22.66■■□□□ 1.22
CCDC78-214ENST00000485091 VPS72Q15906 364 aa22.65■■□□□ 1.22
CCDC78-214ENST00000485091 PCDH11XQ9BZA7 1347 aa22.65■■□□□ 1.22
CCDC78-214ENST00000485091 PCDH11YQ9BZA8 1340 aa22.65■■□□□ 1.22
CCDC78-214ENST00000485091 PLEKHG2Q9H7P9 1386 aa22.65■■□□□ 1.22
CCDC78-214ENST00000485091 THRAP3Q9Y2W1 955 aaKnown RBP22.65■■□□□ 1.22
CCDC78-214ENST00000485091 DISP2A7MBM2 1401 aa22.64■■□□□ 1.22
CCDC78-214ENST00000485091 CHL1O00533 1208 aa22.64■■□□□ 1.21
CCDC78-214ENST00000485091 TEFQ10587 303 aa22.64■■□□□ 1.21
CCDC78-214ENST00000485091 ZNF772Q68DY9 489 aaPredicted RBP22.64■■□□□ 1.21
CCDC78-214ENST00000485091 POTEAQ6S8J7 498 aa22.64■■□□□ 1.21
CCDC78-214ENST00000485091 TSPYL4Q9UJ04 414 aa22.64■■□□□ 1.21
CCDC78-214ENST00000485091 CEMIPQ8WUJ3 1361 aa22.63■■□□□ 1.21
CCDC78-214ENST00000485091 LRRC37A3O60309 1634 aa22.63■■□□□ 1.21
CCDC78-214ENST00000485091 TAF7Q15545 349 aaPredicted RBP22.62■■□□□ 1.21
CCDC78-214ENST00000485091 EXOC5O00471 708 aa22.62■■□□□ 1.21
CCDC78-214ENST00000485091 KDM6AO15550 1401 aaPredicted RBP22.61■■□□□ 1.21
CCDC78-214ENST00000485091 HSP90AB1P08238 724 aaKnown RBP22.61■■□□□ 1.21
CCDC78-214ENST00000485091 FAM98CQ17RN3 349 aaKnown RBP22.61■■□□□ 1.21
CCDC78-214ENST00000485091 ELL2O00472 640 aaPredicted RBP22.6■■□□□ 1.21
CCDC78-214ENST00000485091 WNK3Q9BYP7 1800 aa22.6■■□□□ 1.21
CCDC78-214ENST00000485091 DCAF5Q96JK2 942 aa22.6■■□□□ 1.21
CCDC78-214ENST00000485091 CDCA7Q9BWT1 371 aaPredicted RBP22.6■■□□□ 1.21
CCDC78-214ENST00000485091 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
CCDC78-214ENST00000485091 SHANK3Q9BYB0 1731 aa22.59■■□□□ 1.21
CCDC78-214ENST00000485091 BARGINQ6ZT62 677 aa22.59■■□□□ 1.21
CCDC78-214ENST00000485091 BTBD11A6QL63 1104 aa22.58■■□□□ 1.21
CCDC78-214ENST00000485091 DDB1Q16531 1140 aa22.58■■□□□ 1.21
CCDC78-214ENST00000485091 KRT24Q2M2I5 525 aa22.58■■□□□ 1.21
CCDC78-214ENST00000485091 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
CCDC78-214ENST00000485091 A0A0G2JS52 829 aa22.57■■□□□ 1.2
CCDC78-214ENST00000485091 MYT1Q01538 1121 aa22.57■■□□□ 1.2
CCDC78-214ENST00000485091 TSPYL6Q8N831 410 aa22.57■■□□□ 1.2
CCDC78-214ENST00000485091 C8orf58Q8NAV2 365 aa22.57■■□□□ 1.2
CCDC78-214ENST00000485091 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-214ENST00000485091 GTF3C3Q9Y5Q9 886 aa22.57■■□□□ 1.2
CCDC78-214ENST00000485091 BCAR3O75815 825 aa22.56■■□□□ 1.2
CCDC78-214ENST00000485091 NFATC2IPQ8NCF5 419 aa22.56■■□□□ 1.2
CCDC78-214ENST00000485091 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms