RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 EZH2Q15910 746 aaKnown RBP22.04■■□□□ 1.12
DDR1-246ENST00000485023 MTHFSP49914 203 aa22.03■■□□□ 1.12
DDR1-246ENST00000485023 KCNQ2O43526 872 aa22.02■■□□□ 1.12
DDR1-246ENST00000485023 BCL9O00512 1426 aa22.02■■□□□ 1.12
DDR1-246ENST00000485023 NCAPD2Q15021 1401 aa22.02■■□□□ 1.12
DDR1-246ENST00000485023 BCL11BQ9C0K0 894 aaPredicted RBP22.01■■□□□ 1.11
DDR1-246ENST00000485023 NHSQ6T4R5 1651 aa22.01■■□□□ 1.11
DDR1-246ENST00000485023 CAMKK2Q96RR4 588 aa21.99■■□□□ 1.11
DDR1-246ENST00000485023 IGSF1Q8N6C5 1336 aa21.99■■□□□ 1.11
DDR1-246ENST00000485023 DOT1LQ8TEK3 1739 aa21.97■■□□□ 1.11
DDR1-246ENST00000485023 AEBP1Q8IUX7 1158 aa21.97■■□□□ 1.11
DDR1-246ENST00000485023 SYTL4Q96C24 671 aaPredicted RBP21.97■■□□□ 1.11
DDR1-246ENST00000485023 PCDH11XQ9BZA7 1347 aa21.97■■□□□ 1.11
DDR1-246ENST00000485023 PCDH11YQ9BZA8 1340 aa21.97■■□□□ 1.11
DDR1-246ENST00000485023 IL13P35225 146 aa21.96■■□□□ 1.11
DDR1-246ENST00000485023 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
DDR1-246ENST00000485023 PKD1L3Q7Z443 1732 aa21.96■■□□□ 1.11
DDR1-246ENST00000485023 RREB1Q92766 1687 aa21.95■■□□□ 1.1
DDR1-246ENST00000485023 PARD3Q8TEW0 1356 aa21.94■■□□□ 1.1
DDR1-246ENST00000485023 CYP27B1O15528 508 aa21.93■■□□□ 1.1
DDR1-246ENST00000485023 SULT6B1Q6IMI4 303 aa21.93■■□□□ 1.1
DDR1-246ENST00000485023 SPG7Q9UQ90 795 aa21.93■■□□□ 1.1
DDR1-246ENST00000485023 NUP188Q5SRE5 1749 aa21.92■■□□□ 1.1
DDR1-246ENST00000485023 COL3A1P02461 1466 aaPredicted RBP21.92■■□□□ 1.1
DDR1-246ENST00000485023 PSDA5PKW4 1024 aaPredicted RBP21.92■■□□□ 1.1
DDR1-246ENST00000485023 PRIM1P49642 420 aaKnown RBP21.92■■□□□ 1.1
DDR1-246ENST00000485023 BTAF1O14981 1849 aa21.92■■□□□ 1.1
DDR1-246ENST00000485023 DIAPH1O60610 1272 aaKnown RBP21.91■■□□□ 1.1
DDR1-246ENST00000485023 PPP2R1AP30153 589 aa21.91■■□□□ 1.1
DDR1-246ENST00000485023 HMOX1P09601 288 aa21.9■■□□□ 1.1
DDR1-246ENST00000485023 RGPD3A6NKT7 1758 aaPredicted RBP21.89■■□□□ 1.1
DDR1-246ENST00000485023 RGPD4Q7Z3J3 1758 aa21.89■■□□□ 1.1
DDR1-246ENST00000485023 PLSCR1O15162 318 aa21.89■■□□□ 1.09
DDR1-246ENST00000485023 R3HDM1Q15032 1099 aaKnown RBP21.88■■□□□ 1.09
DDR1-246ENST00000485023 TOGARAM1Q9Y4F4 1720 aa21.88■■□□□ 1.09
DDR1-246ENST00000485023 U2SURPO15042 1029 aaKnown RBP21.87■■□□□ 1.09
DDR1-246ENST00000485023 SRCAPQ6ZRS2 3230 aa21.87■■□□□ 1.09
DDR1-246ENST00000485023 KDRP35968 1356 aa21.87■■□□□ 1.09
DDR1-246ENST00000485023 PHKG2P15735 406 aa21.86■■□□□ 1.09
DDR1-246ENST00000485023 TXNRD1Q16881 649 aa21.86■■□□□ 1.09
DDR1-246ENST00000485023 CFAP53Q96M91 514 aa21.86■■□□□ 1.09
DDR1-246ENST00000485023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.86■■□□□ 1.09
DDR1-246ENST00000485023 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
DDR1-246ENST00000485023 IFNL2Q8IZJ0 200 aa21.85■■□□□ 1.09
DDR1-246ENST00000485023 PROM2Q8N271 834 aa21.85■■□□□ 1.09
DDR1-246ENST00000485023 ZNF530Q6P9A1 599 aaPredicted RBP21.84■■□□□ 1.09
DDR1-246ENST00000485023 MPRIPQ6WCQ1 1025 aa21.84■■□□□ 1.09
DDR1-246ENST00000485023 KAT6BQ8WYB5 2073 aa21.83■■□□□ 1.09
DDR1-246ENST00000485023 NBPF14Q5TI25 921 aa21.82■■□□□ 1.08
DDR1-246ENST00000485023 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
DDR1-246ENST00000485023 PLEKHG2Q9H7P9 1386 aa21.82■■□□□ 1.08
DDR1-246ENST00000485023 AMOTQ4VCS5 1084 aa21.81■■□□□ 1.08
DDR1-246ENST00000485023 NKX1-1Q15270 411 aaPredicted RBP21.8■■□□□ 1.08
DDR1-246ENST00000485023 KCNQ4P56696 695 aa21.79■■□□□ 1.08
DDR1-246ENST00000485023 C1orf141Q5JVX7 400 aa21.79■■□□□ 1.08
DDR1-246ENST00000485023 KDM6AO15550 1401 aaPredicted RBP21.78■■□□□ 1.08
DDR1-246ENST00000485023 ITGB4P16144 1822 aa21.78■■□□□ 1.08
DDR1-246ENST00000485023 LRRC4BQ9NT99 713 aa21.77■■□□□ 1.08
DDR1-246ENST00000485023 TMOD3Q9NYL9 352 aa21.77■■□□□ 1.08
DDR1-246ENST00000485023 PIGBQ92521 554 aa21.76■■□□□ 1.07
DDR1-246ENST00000485023 NUDCQ9Y266 331 aa21.76■■□□□ 1.07
DDR1-246ENST00000485023 PALLDQ8WX93 1383 aa21.75■■□□□ 1.07
DDR1-246ENST00000485023 HSP90AB1P08238 724 aaKnown RBP21.75■■□□□ 1.07
DDR1-246ENST00000485023 U2AF1L5P0DN76 240 aaPredicted RBP21.75■■□□□ 1.07
DDR1-246ENST00000485023 U2AF1Q01081 240 aaKnown RBP eCLIP21.75■■□□□ 1.07
DDR1-246ENST00000485023 STK32BQ9NY57 414 aa21.75■■□□□ 1.07
DDR1-246ENST00000485023 PAPPAQ13219 1627 aa21.75■■□□□ 1.07
DDR1-246ENST00000485023 LY75O60449 1722 aa21.75■■□□□ 1.07
DDR1-246ENST00000485023 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
DDR1-246ENST00000485023 RALBP1Q15311 655 aa21.74■■□□□ 1.07
DDR1-246ENST00000485023 MTHFSDQ2M296 383 aaKnown RBP21.74■■□□□ 1.07
DDR1-246ENST00000485023 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
DDR1-246ENST00000485023 CCNL1Q9UK58 526 aaPredicted RBP21.74■■□□□ 1.07
DDR1-246ENST00000485023 PRKAR2BP31323 418 aa21.73■■□□□ 1.07
DDR1-246ENST00000485023 ZNF827Q17R98 1081 aa21.72■■□□□ 1.07
DDR1-246ENST00000485023 SLC27A3Q5K4L6 730 aa21.72■■□□□ 1.07
DDR1-246ENST00000485023 CABP4P57796 275 aa21.71■■□□□ 1.07
DDR1-246ENST00000485023 SLC15A2Q16348 729 aa21.71■■□□□ 1.07
DDR1-246ENST00000485023 AKAP4Q5JQC9 854 aa21.71■■□□□ 1.07
DDR1-246ENST00000485023 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
DDR1-246ENST00000485023 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
DDR1-246ENST00000485023 ERVV-2B6SEH9 535 aa21.69■■□□□ 1.06
DDR1-246ENST00000485023 SMARCC1Q92922 1105 aaPredicted RBP21.69■■□□□ 1.06
DDR1-246ENST00000485023 PDGFDQ9GZP0 370 aaPredicted RBP21.69■■□□□ 1.06
DDR1-246ENST00000485023 MYBBP1AQ9BQG0 1328 aaKnown RBP21.69■■□□□ 1.06
DDR1-246ENST00000485023 PHACTR3Q96KR7 559 aa21.68■■□□□ 1.06
DDR1-246ENST00000485023 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
DDR1-246ENST00000485023 ATG3Q9NT62 314 aa21.67■■□□□ 1.06
DDR1-246ENST00000485023 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
DDR1-246ENST00000485023 C5P01031 1676 aa21.66■■□□□ 1.06
DDR1-246ENST00000485023 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
DDR1-246ENST00000485023 NFATC2IPQ8NCF5 419 aa21.65■■□□□ 1.06
DDR1-246ENST00000485023 GAS2L2Q8NHY3 880 aa21.65■■□□□ 1.06
DDR1-246ENST00000485023 PRKRIP1Q9H875 184 aaPredicted RBP21.65■■□□□ 1.06
DDR1-246ENST00000485023 CASZ1Q86V15 1759 aa21.65■■□□□ 1.06
DDR1-246ENST00000485023 RNMTO43148 476 aaKnown RBP21.64■■□□□ 1.05
DDR1-246ENST00000485023 AKT1S1Q96B36 256 aa21.64■■□□□ 1.05
DDR1-246ENST00000485023 LRP5O75197 1615 aa21.64■■□□□ 1.05
DDR1-246ENST00000485023 LOC102724428A0A0B4J2F2 783 aa21.63■■□□□ 1.05
DDR1-246ENST00000485023 FCHSD2O94868 740 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms