RNA–Protein interactions for RNA: ENST00000484968.1

NEB-213, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-213ENST00000484968 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
NEB-213ENST00000484968 CYP27B1O15528 508 aa12.43□□□□□ -0.42
NEB-213ENST00000484968 TMPOP42166 694 aaKnown RBP12.43□□□□□ -0.42
NEB-213ENST00000484968 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
NEB-213ENST00000484968 RAPGEF4Q8WZA2 1011 aa12.42□□□□□ -0.42
NEB-213ENST00000484968 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
NEB-213ENST00000484968 THRAP3Q9Y2W1 955 aaKnown RBP12.42□□□□□ -0.42
NEB-213ENST00000484968 NFE2L2Q16236 605 aa12.41□□□□□ -0.42
NEB-213ENST00000484968 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
NEB-213ENST00000484968 SHANK3Q9BYB0 1731 aa12.41□□□□□ -0.42
NEB-213ENST00000484968 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
NEB-213ENST00000484968 THSD7AQ9UPZ6 1657 aa12.41□□□□□ -0.42
NEB-213ENST00000484968 WNK3Q9BYP7 1800 aa12.4□□□□□ -0.42
NEB-213ENST00000484968 DCTN1Q14203 1278 aa12.4□□□□□ -0.42
NEB-213ENST00000484968 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
NEB-213ENST00000484968 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
NEB-213ENST00000484968 THUMPD2Q9BTF0 503 aaKnown RBP12.4□□□□□ -0.42
NEB-213ENST00000484968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEB-213ENST00000484968 PKD1L3Q7Z443 1732 aa12.4□□□□□ -0.43
NEB-213ENST00000484968 ZNF521Q96K83 1311 aa12.39□□□□□ -0.43
NEB-213ENST00000484968 PHKG2P15735 406 aa12.39□□□□□ -0.43
NEB-213ENST00000484968 RIPK4P57078 832 aa12.39□□□□□ -0.43
NEB-213ENST00000484968 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
NEB-213ENST00000484968 MARCH10Q8NA82 808 aaPredicted RBP12.39□□□□□ -0.43
NEB-213ENST00000484968 IL17REQ8NFR9 667 aa12.39□□□□□ -0.43
NEB-213ENST00000484968 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
NEB-213ENST00000484968 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
NEB-213ENST00000484968 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
NEB-213ENST00000484968 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEB-213ENST00000484968 AMOTQ4VCS5 1084 aa12.38□□□□□ -0.43
NEB-213ENST00000484968 ZNF530Q6P9A1 599 aaPredicted RBP12.38□□□□□ -0.43
NEB-213ENST00000484968 SEPT12Q8IYM1 358 aa12.38□□□□□ -0.43
NEB-213ENST00000484968 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
NEB-213ENST00000484968 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
NEB-213ENST00000484968 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
NEB-213ENST00000484968 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
NEB-213ENST00000484968 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
NEB-213ENST00000484968 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
NEB-213ENST00000484968 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
NEB-213ENST00000484968 MPRIPQ6WCQ1 1025 aa12.37□□□□□ -0.43
NEB-213ENST00000484968 MCM10Q7L590 875 aa12.37□□□□□ -0.43
NEB-213ENST00000484968 DDX54Q8TDD1 881 aaKnown RBP12.37□□□□□ -0.43
NEB-213ENST00000484968 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
NEB-213ENST00000484968 SPG7Q9UQ90 795 aa12.37□□□□□ -0.43
NEB-213ENST00000484968 PLEKHG2Q9H7P9 1386 aa12.37□□□□□ -0.43
NEB-213ENST00000484968 EXOC5O00471 708 aa12.36□□□□□ -0.43
NEB-213ENST00000484968 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
NEB-213ENST00000484968 DDB1Q16531 1140 aa12.36□□□□□ -0.43
NEB-213ENST00000484968 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
NEB-213ENST00000484968 GAS2L2Q8NHY3 880 aa12.36□□□□□ -0.43
NEB-213ENST00000484968 CDCA7Q9BWT1 371 aaPredicted RBP12.36□□□□□ -0.43
NEB-213ENST00000484968 MAP3K5Q99683 1374 aa12.35□□□□□ -0.43
NEB-213ENST00000484968 RXRBP28702 533 aa12.35□□□□□ -0.43
NEB-213ENST00000484968 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
NEB-213ENST00000484968 AKAP4Q5JQC9 854 aa12.35□□□□□ -0.43
NEB-213ENST00000484968 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
NEB-213ENST00000484968 RGS12O14924 1447 aa12.35□□□□□ -0.43
NEB-213ENST00000484968 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
NEB-213ENST00000484968 CEMIPQ8WUJ3 1361 aa12.34□□□□□ -0.43
NEB-213ENST00000484968 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
NEB-213ENST00000484968 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
NEB-213ENST00000484968 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
NEB-213ENST00000484968 PTF1AQ7RTS3 328 aa12.34□□□□□ -0.43
NEB-213ENST00000484968 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
NEB-213ENST00000484968 DLG5Q8TDM6 1919 aa12.34□□□□□ -0.43
NEB-213ENST00000484968 PCDH11XQ9BZA7 1347 aa12.34□□□□□ -0.43
NEB-213ENST00000484968 PCDH11YQ9BZA8 1340 aa12.34□□□□□ -0.43
NEB-213ENST00000484968 TOGARAM1Q9Y4F4 1720 aa12.33□□□□□ -0.44
NEB-213ENST00000484968 ZBED9Q6R2W3 1325 aa12.32□□□□□ -0.44
NEB-213ENST00000484968 A0A0G2JS52 829 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
NEB-213ENST00000484968 NEFMP07197 916 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 ZNF853P0CG23 659 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 MYT1Q01538 1121 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 BRWD3Q6RI45 1802 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 EP400Q96L91 3159 aa12.31□□□□□ -0.44
NEB-213ENST00000484968 KCNQ2O43526 872 aa12.3□□□□□ -0.44
NEB-213ENST00000484968 KCNQ3O43525 872 aa12.29□□□□□ -0.44
NEB-213ENST00000484968 PDE3BQ13370 1112 aa12.29□□□□□ -0.44
NEB-213ENST00000484968 KRT27Q7Z3Y8 459 aa12.29□□□□□ -0.44
NEB-213ENST00000484968 WDR63Q8IWG1 891 aa12.29□□□□□ -0.44
NEB-213ENST00000484968 TRMT2AQ8IZ69 625 aaKnown RBP12.29□□□□□ -0.44
NEB-213ENST00000484968 NFATC2IPQ8NCF5 419 aa12.29□□□□□ -0.44
NEB-213ENST00000484968 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
NEB-213ENST00000484968 MRC1P22897 1456 aa12.28□□□□□ -0.44
NEB-213ENST00000484968 CHL1O00533 1208 aa12.28□□□□□ -0.44
NEB-213ENST00000484968 PRIM1P49642 420 aaKnown RBP12.28□□□□□ -0.44
NEB-213ENST00000484968 SLFN5Q08AF3 891 aa12.28□□□□□ -0.44
NEB-213ENST00000484968 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
NEB-213ENST00000484968 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
NEB-213ENST00000484968 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
NEB-213ENST00000484968 SLC52A2Q9HAB3 445 aa12.28□□□□□ -0.44
NEB-213ENST00000484968 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
NEB-213ENST00000484968 BCL9O00512 1426 aa12.28□□□□□ -0.44
NEB-213ENST00000484968 PIGBQ92521 554 aa12.27□□□□□ -0.45
NEB-213ENST00000484968 MBIPQ9NS73 344 aa12.27□□□□□ -0.45
NEB-213ENST00000484968 SIPA1L3O60292 1781 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms