RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 MEGF6O75095 1541 aa24.37■■□□□ 1.49
CNKSR1-208ENST00000484874 SF3B2Q13435 895 aaKnown RBP24.35■■□□□ 1.49
CNKSR1-208ENST00000484874 DDX54Q8TDD1 881 aaKnown RBP24.35■■□□□ 1.49
CNKSR1-208ENST00000484874 SPG7Q9UQ90 795 aa24.34■■□□□ 1.49
CNKSR1-208ENST00000484874 KDRP35968 1356 aa24.33■■□□□ 1.49
CNKSR1-208ENST00000484874 TRIM37O94972 964 aa24.33■■□□□ 1.49
CNKSR1-208ENST00000484874 SULT6B1Q6IMI4 303 aa24.33■■□□□ 1.49
CNKSR1-208ENST00000484874 COL3A1P02461 1466 aaPredicted RBP24.32■■□□□ 1.48
CNKSR1-208ENST00000484874 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
CNKSR1-208ENST00000484874 BCL11BQ9C0K0 894 aaPredicted RBP24.31■■□□□ 1.48
CNKSR1-208ENST00000484874 NUDCQ9Y266 331 aa24.31■■□□□ 1.48
CNKSR1-208ENST00000484874 PRKRIP1Q9H875 184 aaPredicted RBP24.3■■□□□ 1.48
CNKSR1-208ENST00000484874 PCDH11XQ9BZA7 1347 aa24.3■■□□□ 1.48
CNKSR1-208ENST00000484874 PCDH11YQ9BZA8 1340 aa24.3■■□□□ 1.48
CNKSR1-208ENST00000484874 AMOTQ4VCS5 1084 aa24.29■■□□□ 1.48
CNKSR1-208ENST00000484874 PLEKHO1Q53GL0 409 aaPredicted RBP24.29■■□□□ 1.48
CNKSR1-208ENST00000484874 AEBP1Q8IUX7 1158 aa24.29■■□□□ 1.48
CNKSR1-208ENST00000484874 CYP27B1O15528 508 aa24.28■■□□□ 1.48
CNKSR1-208ENST00000484874 MYBBP1AQ9BQG0 1328 aaKnown RBP24.28■■□□□ 1.48
CNKSR1-208ENST00000484874 BAG6P46379 1132 aa24.27■■□□□ 1.48
CNKSR1-208ENST00000484874 NKX1-1Q15270 411 aaPredicted RBP24.27■■□□□ 1.48
CNKSR1-208ENST00000484874 SBF2Q86WG5 1849 aa24.26■■□□□ 1.47
CNKSR1-208ENST00000484874 U2SURPO15042 1029 aaKnown RBP24.25■■□□□ 1.47
CNKSR1-208ENST00000484874 APBA3O96018 575 aa24.25■■□□□ 1.47
CNKSR1-208ENST00000484874 IFNL2Q8IZJ0 200 aa24.25■■□□□ 1.47
CNKSR1-208ENST00000484874 PKD1L3Q7Z443 1732 aa24.24■■□□□ 1.47
CNKSR1-208ENST00000484874 SHANK3Q9BYB0 1731 aa24.24■■□□□ 1.47
CNKSR1-208ENST00000484874 HMOX1P09601 288 aa24.24■■□□□ 1.47
CNKSR1-208ENST00000484874 PLSCR1O15162 318 aa24.23■■□□□ 1.47
CNKSR1-208ENST00000484874 DEFB132Q7Z7B7 95 aa24.23■■□□□ 1.47
CNKSR1-208ENST00000484874 KCNQ2O43526 872 aa24.22■■□□□ 1.47
CNKSR1-208ENST00000484874 PHKG2P15735 406 aa24.22■■□□□ 1.47
CNKSR1-208ENST00000484874 FCHSD2O94868 740 aa24.21■■□□□ 1.47
CNKSR1-208ENST00000484874 ACSBG1Q96GR2 724 aa24.21■■□□□ 1.47
CNKSR1-208ENST00000484874 PRIM1P49642 420 aaKnown RBP24.2■■□□□ 1.46
CNKSR1-208ENST00000484874 PTF1AQ7RTS3 328 aa24.2■■□□□ 1.46
CNKSR1-208ENST00000484874 CAMKK2Q96RR4 588 aa24.2■■□□□ 1.46
CNKSR1-208ENST00000484874 TNS1Q9HBL0 1735 aaKnown RBP24.19■■□□□ 1.46
CNKSR1-208ENST00000484874 HSP90AB1P08238 724 aaKnown RBP24.19■■□□□ 1.46
CNKSR1-208ENST00000484874 U2AF1L5P0DN76 240 aaPredicted RBP24.19■■□□□ 1.46
CNKSR1-208ENST00000484874 U2AF1Q01081 240 aaKnown RBP eCLIP24.19■■□□□ 1.46
CNKSR1-208ENST00000484874 EN1Q05925 392 aaPredicted RBP24.19■■□□□ 1.46
CNKSR1-208ENST00000484874 KAT6BQ8WYB5 2073 aa24.19■■□□□ 1.46
CNKSR1-208ENST00000484874 RSPH6AQ9H0K4 717 aa24.18■■□□□ 1.46
CNKSR1-208ENST00000484874 ZNF530Q6P9A1 599 aaPredicted RBP24.17■■□□□ 1.46
CNKSR1-208ENST00000484874 C1orf141Q5JVX7 400 aa24.16■■□□□ 1.46
CNKSR1-208ENST00000484874 DCAF5Q96JK2 942 aa24.16■■□□□ 1.46
CNKSR1-208ENST00000484874 NHSQ6T4R5 1651 aa24.15■■□□□ 1.46
CNKSR1-208ENST00000484874 AKAP4Q5JQC9 854 aa24.15■■□□□ 1.46
CNKSR1-208ENST00000484874 ANP32CO43423 234 aa24.14■■□□□ 1.45
CNKSR1-208ENST00000484874 EZH2Q15910 746 aaKnown RBP24.14■■□□□ 1.45
CNKSR1-208ENST00000484874 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
CNKSR1-208ENST00000484874 ERVV-2B6SEH9 535 aa24.13■■□□□ 1.45
CNKSR1-208ENST00000484874 SYTL4Q96C24 671 aaPredicted RBP24.13■■□□□ 1.45
CNKSR1-208ENST00000484874 PNNQ9H307 717 aaKnown RBP24.13■■□□□ 1.45
CNKSR1-208ENST00000484874 PRKAR2BP31323 418 aa24.12■■□□□ 1.45
CNKSR1-208ENST00000484874 GAS2L2Q8NHY3 880 aa24.11■■□□□ 1.45
CNKSR1-208ENST00000484874 PROM2Q8N271 834 aa24.1■■□□□ 1.45
CNKSR1-208ENST00000484874 PHACTR3Q96KR7 559 aa24.1■■□□□ 1.45
CNKSR1-208ENST00000484874 MPRIPQ6WCQ1 1025 aa24.08■■□□□ 1.45
CNKSR1-208ENST00000484874 PIGBQ92521 554 aa24.08■■□□□ 1.45
CNKSR1-208ENST00000484874 DOT1LQ8TEK3 1739 aa24.07■■□□□ 1.44
CNKSR1-208ENST00000484874 RGPD3A6NKT7 1758 aaPredicted RBP24.07■■□□□ 1.44
CNKSR1-208ENST00000484874 RGPD4Q7Z3J3 1758 aa24.07■■□□□ 1.44
CNKSR1-208ENST00000484874 PLEKHF1Q96S99 279 aa24.07■■□□□ 1.44
CNKSR1-208ENST00000484874 BTAF1O14981 1849 aa24.06■■□□□ 1.44
CNKSR1-208ENST00000484874 TXNRD1Q16881 649 aa24.06■■□□□ 1.44
CNKSR1-208ENST00000484874 TMOD3Q9NYL9 352 aa24.06■■□□□ 1.44
CNKSR1-208ENST00000484874 GNAT3A8MTJ3 354 aa24.05■■□□□ 1.44
CNKSR1-208ENST00000484874 NEFMP07197 916 aa24.05■■□□□ 1.44
CNKSR1-208ENST00000484874 SMARCC1Q92922 1105 aaPredicted RBP24.05■■□□□ 1.44
CNKSR1-208ENST00000484874 KDM6AO15550 1401 aaPredicted RBP24.04■■□□□ 1.44
CNKSR1-208ENST00000484874 RNMTO43148 476 aaKnown RBP24.04■■□□□ 1.44
CNKSR1-208ENST00000484874 SLC27A3Q5K4L6 730 aa24.04■■□□□ 1.44
CNKSR1-208ENST00000484874 ITGB4P16144 1822 aa24.03■■□□□ 1.44
CNKSR1-208ENST00000484874 CABP4P57796 275 aa24.03■■□□□ 1.44
CNKSR1-208ENST00000484874 LGR6Q9HBX8 967 aa24.03■■□□□ 1.44
CNKSR1-208ENST00000484874 TOGARAM1Q9Y4F4 1720 aa24.03■■□□□ 1.44
CNKSR1-208ENST00000484874 HTATSF1O43719 755 aaKnown RBP24.02■■□□□ 1.44
CNKSR1-208ENST00000484874 HMGB2P26583 209 aaKnown RBP24.02■■□□□ 1.44
CNKSR1-208ENST00000484874 WDR43Q15061 677 aaKnown RBP eCLIP24.02■■□□□ 1.44
CNKSR1-208ENST00000484874 NBPF14Q5TI25 921 aa24.01■■□□□ 1.43
CNKSR1-208ENST00000484874 NFATC2IPQ8NCF5 419 aa24.01■■□□□ 1.43
CNKSR1-208ENST00000484874 ADAMTS8Q9UP79 889 aa24.01■■□□□ 1.43
CNKSR1-208ENST00000484874 MAP3K5Q99683 1374 aa24.01■■□□□ 1.43
CNKSR1-208ENST00000484874 RREB1Q92766 1687 aa23.99■■□□□ 1.43
CNKSR1-208ENST00000484874 IL17REQ8NFR9 667 aa23.99■■□□□ 1.43
CNKSR1-208ENST00000484874 SLC52A2Q9HAB3 445 aa23.99■■□□□ 1.43
CNKSR1-208ENST00000484874 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
CNKSR1-208ENST00000484874 ASAP1Q9ULH1 1129 aa23.98■■□□□ 1.43
CNKSR1-208ENST00000484874 SCN11AQ9UI33 1791 aa23.98■■□□□ 1.43
CNKSR1-208ENST00000484874 CCDC184Q52MB2 194 aa23.97■■□□□ 1.43
CNKSR1-208ENST00000484874 LRRC4BQ9NT99 713 aa23.97■■□□□ 1.43
CNKSR1-208ENST00000484874 ADAMTS7Q9UKP4 1686 aa23.97■■□□□ 1.43
CNKSR1-208ENST00000484874 PALLDQ8WX93 1383 aa23.96■■□□□ 1.43
CNKSR1-208ENST00000484874 MAPK8IP3Q9UPT6 1336 aa23.96■■□□□ 1.43
CNKSR1-208ENST00000484874 NFE2L2Q16236 605 aa23.96■■□□□ 1.43
CNKSR1-208ENST00000484874 CEMIPQ8WUJ3 1361 aa23.95■■□□□ 1.42
CNKSR1-208ENST00000484874 RTF1Q92541 710 aaKnown RBP23.95■■□□□ 1.42
CNKSR1-208ENST00000484874 RUNDC1Q96C34 613 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms