RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 BCL11BQ9C0K0 894 aaPredicted RBP18.94■□□□□ 0.62
SNX5-212ENST00000484809 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
SNX5-212ENST00000484809 NHSQ6T4R5 1651 aa18.93■□□□□ 0.62
SNX5-212ENST00000484809 PTF1AQ7RTS3 328 aa18.93■□□□□ 0.62
SNX5-212ENST00000484809 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
SNX5-212ENST00000484809 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
SNX5-212ENST00000484809 MEGF6O75095 1541 aa18.91■□□□□ 0.62
SNX5-212ENST00000484809 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
SNX5-212ENST00000484809 PLSCR1O15162 318 aa18.9■□□□□ 0.62
SNX5-212ENST00000484809 TNNT2P45379 298 aaPredicted RBP18.9■□□□□ 0.62
SNX5-212ENST00000484809 USHBP1Q8N6Y0 703 aa18.9■□□□□ 0.62
SNX5-212ENST00000484809 BTAF1O14981 1849 aa18.89■□□□□ 0.61
SNX5-212ENST00000484809 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
SNX5-212ENST00000484809 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
SNX5-212ENST00000484809 KCNQ2O43526 872 aa18.88■□□□□ 0.61
SNX5-212ENST00000484809 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
SNX5-212ENST00000484809 PER1O15534 1290 aaPredicted RBP18.87■□□□□ 0.61
SNX5-212ENST00000484809 AMER1Q5JTC6 1135 aaPredicted RBP18.87■□□□□ 0.61
SNX5-212ENST00000484809 MORC1Q86VD1 984 aa18.87■□□□□ 0.61
SNX5-212ENST00000484809 DDX54Q8TDD1 881 aaKnown RBP18.87■□□□□ 0.61
SNX5-212ENST00000484809 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
SNX5-212ENST00000484809 ACSBG1Q96GR2 724 aa18.86■□□□□ 0.61
SNX5-212ENST00000484809 DOT1LQ8TEK3 1739 aa18.85■□□□□ 0.61
SNX5-212ENST00000484809 PSDA5PKW4 1024 aaPredicted RBP18.85■□□□□ 0.61
SNX5-212ENST00000484809 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
SNX5-212ENST00000484809 PKD1L3Q7Z443 1732 aa18.85■□□□□ 0.61
SNX5-212ENST00000484809 EYA1Q99502 592 aa18.84■□□□□ 0.61
SNX5-212ENST00000484809 R3HDM1Q15032 1099 aaKnown RBP18.83■□□□□ 0.61
SNX5-212ENST00000484809 EIF4A2Q14240 407 aaKnown RBP18.82■□□□□ 0.6
SNX5-212ENST00000484809 PROM2Q8N271 834 aa18.82■□□□□ 0.6
SNX5-212ENST00000484809 NBPF14Q5TI25 921 aa18.81■□□□□ 0.6
SNX5-212ENST00000484809 LRP5O75197 1615 aa18.8■□□□□ 0.6
SNX5-212ENST00000484809 TXNRD1Q16881 649 aa18.79■□□□□ 0.6
SNX5-212ENST00000484809 ITGB4P16144 1822 aa18.79■□□□□ 0.6
SNX5-212ENST00000484809 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
SNX5-212ENST00000484809 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
SNX5-212ENST00000484809 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
SNX5-212ENST00000484809 PRIM1P49642 420 aaKnown RBP18.77■□□□□ 0.6
SNX5-212ENST00000484809 LY75O60449 1722 aa18.77■□□□□ 0.6
SNX5-212ENST00000484809 IGSF1Q8N6C5 1336 aa18.77■□□□□ 0.6
SNX5-212ENST00000484809 CYP27B1O15528 508 aa18.76■□□□□ 0.59
SNX5-212ENST00000484809 CC2D1BQ5T0F9 858 aaKnown RBP18.76■□□□□ 0.59
SNX5-212ENST00000484809 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
SNX5-212ENST00000484809 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
SNX5-212ENST00000484809 ANO8Q9HCE9 1232 aaPredicted RBP18.75■□□□□ 0.59
SNX5-212ENST00000484809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.599e-15■■□□□ 13.3
SNX5-212ENST00000484809 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
SNX5-212ENST00000484809 SPG7Q9UQ90 795 aa18.74■□□□□ 0.59
SNX5-212ENST00000484809 PAPPAQ13219 1627 aa18.73■□□□□ 0.59
SNX5-212ENST00000484809 MTHFSP49914 203 aa18.73■□□□□ 0.59
SNX5-212ENST00000484809 CASZ1Q86V15 1759 aa18.72■□□□□ 0.59
SNX5-212ENST00000484809 IL13P35225 146 aa18.72■□□□□ 0.59
SNX5-212ENST00000484809 NKX1-1Q15270 411 aaPredicted RBP18.72■□□□□ 0.59
SNX5-212ENST00000484809 LRRC4BQ9NT99 713 aa18.7■□□□□ 0.58
SNX5-212ENST00000484809 SLC15A2Q16348 729 aa18.69■□□□□ 0.58
SNX5-212ENST00000484809 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
SNX5-212ENST00000484809 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
SNX5-212ENST00000484809 KDRP35968 1356 aa18.68■□□□□ 0.58
SNX5-212ENST00000484809 PHKG2P15735 406 aa18.68■□□□□ 0.58
SNX5-212ENST00000484809 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
SNX5-212ENST00000484809 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
SNX5-212ENST00000484809 IFNL2Q8IZJ0 200 aa18.68■□□□□ 0.58
SNX5-212ENST00000484809 QSER1Q2KHR3 1735 aa18.68■□□□□ 0.58
SNX5-212ENST00000484809 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
SNX5-212ENST00000484809 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
SNX5-212ENST00000484809 TUBGCP6Q96RT7 1819 aa18.66■□□□□ 0.58
SNX5-212ENST00000484809 PLEKHO1Q53GL0 409 aaPredicted RBP18.66■□□□□ 0.58
SNX5-212ENST00000484809 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
SNX5-212ENST00000484809 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
SNX5-212ENST00000484809 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
SNX5-212ENST00000484809 VIRMAQ69YN4 1812 aaKnown RBP18.65■□□□□ 0.58
SNX5-212ENST00000484809 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
SNX5-212ENST00000484809 PDGFDQ9GZP0 370 aaPredicted RBP18.64■□□□□ 0.57
SNX5-212ENST00000484809 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
SNX5-212ENST00000484809 C5P01031 1676 aa18.63■□□□□ 0.57
SNX5-212ENST00000484809 KCNQ4P56696 695 aa18.63■□□□□ 0.57
SNX5-212ENST00000484809 ZNF827Q17R98 1081 aa18.63■□□□□ 0.57
SNX5-212ENST00000484809 PIGBQ92521 554 aa18.63■□□□□ 0.57
SNX5-212ENST00000484809 SCN11AQ9UI33 1791 aa18.62■□□□□ 0.57
SNX5-212ENST00000484809 ZNF530Q6P9A1 599 aaPredicted RBP18.62■□□□□ 0.57
SNX5-212ENST00000484809 AKT1S1Q96B36 256 aa18.62■□□□□ 0.57
SNX5-212ENST00000484809 SPON1Q9HCB6 807 aa18.62■□□□□ 0.57
SNX5-212ENST00000484809 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
SNX5-212ENST00000484809 PALLDQ8WX93 1383 aa18.61■□□□□ 0.57
SNX5-212ENST00000484809 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
SNX5-212ENST00000484809 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
SNX5-212ENST00000484809 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
SNX5-212ENST00000484809 TMOD3Q9NYL9 352 aa18.6■□□□□ 0.57
SNX5-212ENST00000484809 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
SNX5-212ENST00000484809 HMOX1P09601 288 aa18.59■□□□□ 0.57
SNX5-212ENST00000484809 KDM6AO15550 1401 aaPredicted RBP18.59■□□□□ 0.57
SNX5-212ENST00000484809 ERVV-2B6SEH9 535 aa18.58■□□□□ 0.57
SNX5-212ENST00000484809 ZBTB7AO95365 584 aa18.57■□□□□ 0.56
SNX5-212ENST00000484809 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
SNX5-212ENST00000484809 C1orf141Q5JVX7 400 aa18.57■□□□□ 0.56
SNX5-212ENST00000484809 ASAP1Q9ULH1 1129 aa18.56■□□□□ 0.56
SNX5-212ENST00000484809 C4BP0C0L5 1744 aa18.56■□□□□ 0.56
SNX5-212ENST00000484809 COL24A1Q17RW2 1714 aa18.56■□□□□ 0.56
SNX5-212ENST00000484809 HMGB2P26583 209 aaKnown RBP18.55■□□□□ 0.56
SNX5-212ENST00000484809 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms