RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 AMOTQ4VCS5 1084 aa26.76■■□□□ 1.87
VCPKMT-203ENST00000484763 PLEKHO1Q53GL0 409 aaPredicted RBP26.76■■□□□ 1.87
VCPKMT-203ENST00000484763 TATP17735 454 aaPredicted RBP26.75■■□□□ 1.87
VCPKMT-203ENST00000484763 SLFN5Q08AF3 891 aa26.75■■□□□ 1.87
VCPKMT-203ENST00000484763 PKD1L3Q7Z443 1732 aa26.74■■□□□ 1.87
VCPKMT-203ENST00000484763 IL16Q14005 1332 aa26.73■■□□□ 1.87
VCPKMT-203ENST00000484763 MAP3K5Q99683 1374 aa26.73■■□□□ 1.87
VCPKMT-203ENST00000484763 CALD1Q05682 793 aaKnown RBP26.72■■□□□ 1.87
VCPKMT-203ENST00000484763 SPINK5Q9NQ38 1064 aaPredicted RBP26.72■■□□□ 1.87
VCPKMT-203ENST00000484763 OVOS2A0A0G2JMS6 1433 aa26.72■■□□□ 1.87
VCPKMT-203ENST00000484763 TRMT2AQ8IZ69 625 aaKnown RBP26.71■■□□□ 1.87
VCPKMT-203ENST00000484763 C8orf37Q96NL8 207 aa26.71■■□□□ 1.87
VCPKMT-203ENST00000484763 GNAT3A8MTJ3 354 aa26.7■■□□□ 1.87
VCPKMT-203ENST00000484763 HTATSF1O43719 755 aaKnown RBP26.7■■□□□ 1.87
VCPKMT-203ENST00000484763 DUSP27Q5VZP5 1158 aa26.7■■□□□ 1.87
VCPKMT-203ENST00000484763 RTF1Q92541 710 aaKnown RBP26.7■■□□□ 1.87
VCPKMT-203ENST00000484763 LRRC37A3O60309 1634 aa26.7■■□□□ 1.86
VCPKMT-203ENST00000484763 ZNF530Q6P9A1 599 aaPredicted RBP26.69■■□□□ 1.86
VCPKMT-203ENST00000484763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.69■■□□□ 1.86
VCPKMT-203ENST00000484763 WNK3Q9BYP7 1800 aa26.69■■□□□ 1.86
VCPKMT-203ENST00000484763 NGLY1Q96IV0 654 aa26.68■■□□□ 1.86
VCPKMT-203ENST00000484763 THUMPD2Q9BTF0 503 aaKnown RBP26.68■■□□□ 1.86
VCPKMT-203ENST00000484763 SPG7Q9UQ90 795 aa26.68■■□□□ 1.86
VCPKMT-203ENST00000484763 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.68■■□□□ 1.86
VCPKMT-203ENST00000484763 IL2RBP14784 551 aa26.67■■□□□ 1.86
VCPKMT-203ENST00000484763 MYH16Q9H6N6 1097 aa26.67■■□□□ 1.86
VCPKMT-203ENST00000484763 DCTN1Q14203 1278 aa26.67■■□□□ 1.86
VCPKMT-203ENST00000484763 AKAP4Q5JQC9 854 aa26.67■■□□□ 1.86
VCPKMT-203ENST00000484763 MCM10Q7L590 875 aa26.67■■□□□ 1.86
VCPKMT-203ENST00000484763 USP35Q9P2H5 1018 aa26.67■■□□□ 1.86
VCPKMT-203ENST00000484763 C1orf141Q5JVX7 400 aa26.66■■□□□ 1.86
VCPKMT-203ENST00000484763 MEX3CQ5U5Q3 659 aaKnown RBP26.66■■□□□ 1.86
VCPKMT-203ENST00000484763 VIRMAQ69YN4 1812 aaKnown RBP26.65■■□□□ 1.86
VCPKMT-203ENST00000484763 UNC5CLQ8IV45 518 aa26.65■■□□□ 1.86
VCPKMT-203ENST00000484763 FNBP4Q8N3X1 1017 aaPredicted RBP26.65■■□□□ 1.86
VCPKMT-203ENST00000484763 BCL9LQ86UU0 1499 aa26.64■■□□□ 1.86
VCPKMT-203ENST00000484763 IFT57Q9NWB7 429 aa26.63■■□□□ 1.85
VCPKMT-203ENST00000484763 DISP2A7MBM2 1401 aa26.63■■□□□ 1.85
VCPKMT-203ENST00000484763 SHANK3Q9BYB0 1731 aa26.62■■□□□ 1.85
VCPKMT-203ENST00000484763 SPATA31A1Q5TZJ5 1347 aa26.62■■□□□ 1.85
VCPKMT-203ENST00000484763 GNAI1P63096 354 aa26.62■■□□□ 1.85
VCPKMT-203ENST00000484763 ADAMTS7Q9UKP4 1686 aa26.62■■□□□ 1.85
VCPKMT-203ENST00000484763 FANCIQ9NVI1 1328 aa26.62■■□□□ 1.85
VCPKMT-203ENST00000484763 SPATA31A5Q5VU36 1347 aa26.61■■□□□ 1.85
VCPKMT-203ENST00000484763 SPATA31A7Q8IWB4 1347 aa26.61■■□□□ 1.85
VCPKMT-203ENST00000484763 CFAP44Q96MT7 982 aa26.6■■□□□ 1.85
VCPKMT-203ENST00000484763 THRAP3Q9Y2W1 955 aaKnown RBP26.6■■□□□ 1.85
VCPKMT-203ENST00000484763 CEMIPQ8WUJ3 1361 aa26.6■■□□□ 1.85
VCPKMT-203ENST00000484763 PCDH11XQ9BZA7 1347 aa26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 PCDH11YQ9BZA8 1340 aa26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 ZNF853P0CG23 659 aa26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 IFNL2Q8IZJ0 200 aa26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 IL17REQ8NFR9 667 aa26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 ZCRB1Q8TBF4 217 aaKnown RBP26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 FBXO41Q8TF61 875 aa26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 TSR2Q969E8 191 aaKnown RBP26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 LAS1LQ9Y4W2 734 aaKnown RBP26.59■■□□□ 1.85
VCPKMT-203ENST00000484763 PHKG2P15735 406 aa26.58■■□□□ 1.85
VCPKMT-203ENST00000484763 SCN11AQ9UI33 1791 aa26.58■■□□□ 1.85
VCPKMT-203ENST00000484763 VPS72Q15906 364 aa26.58■■□□□ 1.84
VCPKMT-203ENST00000484763 USP21Q9UK80 565 aa26.58■■□□□ 1.84
VCPKMT-203ENST00000484763 CDCA7Q9BWT1 371 aaPredicted RBP26.57■■□□□ 1.84
VCPKMT-203ENST00000484763 CCDC9Q9Y3X0 531 aaKnown RBP26.57■■□□□ 1.84
VCPKMT-203ENST00000484763 CYP27B1O15528 508 aa26.55■■□□□ 1.84
VCPKMT-203ENST00000484763 MPRIPQ6WCQ1 1025 aa26.55■■□□□ 1.84
VCPKMT-203ENST00000484763 MBIPQ9NS73 344 aa26.55■■□□□ 1.84
VCPKMT-203ENST00000484763 AFF2P51816 1311 aa26.54■■□□□ 1.84
VCPKMT-203ENST00000484763 RNMTO43148 476 aaKnown RBP26.54■■□□□ 1.84
VCPKMT-203ENST00000484763 LGR6Q9HBX8 967 aa26.54■■□□□ 1.84
VCPKMT-203ENST00000484763 HSP90AB1P08238 724 aaKnown RBP26.53■■□□□ 1.84
VCPKMT-203ENST00000484763 RCAN3Q9UKA8 241 aa26.53■■□□□ 1.84
VCPKMT-203ENST00000484763 KDM6AO15550 1401 aaPredicted RBP26.53■■□□□ 1.84
VCPKMT-203ENST00000484763 CHL1O00533 1208 aa26.53■■□□□ 1.84
VCPKMT-203ENST00000484763 BARGINQ6ZT62 677 aa26.53■■□□□ 1.84
VCPKMT-203ENST00000484763 SIPA1L3O60292 1781 aaPredicted RBP26.52■■□□□ 1.84
VCPKMT-203ENST00000484763 TNS2Q63HR2 1409 aa26.52■■□□□ 1.84
VCPKMT-203ENST00000484763 TEFQ10587 303 aa26.51■■□□□ 1.83
VCPKMT-203ENST00000484763 DCAF5Q96JK2 942 aa26.51■■□□□ 1.83
VCPKMT-203ENST00000484763 EXOSC9Q06265 439 aaKnown RBP26.5■■□□□ 1.83
VCPKMT-203ENST00000484763 BABAM1Q9NWV8 329 aa26.5■■□□□ 1.83
VCPKMT-203ENST00000484763 SUPT16HQ9Y5B9 1047 aaKnown RBP26.5■■□□□ 1.83
VCPKMT-203ENST00000484763 MRC1P22897 1456 aa26.49■■□□□ 1.83
VCPKMT-203ENST00000484763 TAF7Q15545 349 aaPredicted RBP26.49■■□□□ 1.83
VCPKMT-203ENST00000484763 TSPYL4Q9UJ04 414 aa26.49■■□□□ 1.83
VCPKMT-203ENST00000484763 CT47B1P0C2W7 299 aaPredicted RBP26.49■■□□□ 1.83
VCPKMT-203ENST00000484763 KDM3BQ7LBC6 1761 aa26.48■■□□□ 1.83
VCPKMT-203ENST00000484763 DDX54Q8TDD1 881 aaKnown RBP26.48■■□□□ 1.83
VCPKMT-203ENST00000484763 ATRNO75882 1429 aa26.47■■□□□ 1.83
VCPKMT-203ENST00000484763 EXOC5O00471 708 aa26.47■■□□□ 1.83
VCPKMT-203ENST00000484763 NKX1-1Q15270 411 aaPredicted RBP26.46■■□□□ 1.83
VCPKMT-203ENST00000484763 GLI3P10071 1580 aa26.45■■□□□ 1.82
VCPKMT-203ENST00000484763 DDB1Q16531 1140 aa26.44■■□□□ 1.82
VCPKMT-203ENST00000484763 MIS18AQ9NYP9 233 aa26.44■■□□□ 1.82
VCPKMT-203ENST00000484763 TRPC5Q9UL62 973 aaPredicted RBP26.44■■□□□ 1.82
VCPKMT-203ENST00000484763 SLC52A2Q9HAB3 445 aa26.44■■□□□ 1.82
VCPKMT-203ENST00000484763 THSD7AQ9UPZ6 1657 aa26.43■■□□□ 1.82
VCPKMT-203ENST00000484763 FAM98CQ17RN3 349 aaKnown RBP26.43■■□□□ 1.82
VCPKMT-203ENST00000484763 TOGARAM1Q9Y4F4 1720 aa26.43■■□□□ 1.82
VCPKMT-203ENST00000484763 GJD4Q96KN9 370 aaPredicted RBP26.42■■□□□ 1.82
VCPKMT-203ENST00000484763 RNF123Q5XPI4 1314 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms