RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 CD2APQ9Y5K6 639 aa26.03■■□□□ 1.76
DDR1-245ENST00000484556 USP54Q70EL1 1684 aa26.03■■□□□ 1.76
DDR1-245ENST00000484556 ANKRD36BQ8N2N9 1353 aa26.02■■□□□ 1.76
DDR1-245ENST00000484556 APLP1P51693 650 aa26.01■■□□□ 1.75
DDR1-245ENST00000484556 CAPN15O75808 1086 aa26■■□□□ 1.75
DDR1-245ENST00000484556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26■■□□□ 1.75
DDR1-245ENST00000484556 C5P01031 1676 aa25.99■■□□□ 1.75
DDR1-245ENST00000484556 DNAJC5GQ8N7S2 189 aa25.98■■□□□ 1.75
DDR1-245ENST00000484556 USP31Q70CQ4 1352 aa25.97■■□□□ 1.75
DDR1-245ENST00000484556 NME9Q86XW9 330 aa25.97■■□□□ 1.75
DDR1-245ENST00000484556 IGSF1Q8N6C5 1336 aa25.96■■□□□ 1.75
DDR1-245ENST00000484556 FAM208AQ9UK61 1670 aaKnown RBP25.96■■□□□ 1.75
DDR1-245ENST00000484556 WDR90Q96KV7 1748 aa25.94■■□□□ 1.74
DDR1-245ENST00000484556 COL13A1Q5TAT6 717 aaPredicted RBP25.94■■□□□ 1.74
DDR1-245ENST00000484556 LTV1Q96GA3 475 aaPredicted RBP25.93■■□□□ 1.74
DDR1-245ENST00000484556 TAF1LQ8IZX4 1826 aa25.92■■□□□ 1.74
DDR1-245ENST00000484556 USP47Q96K76 1375 aa25.92■■□□□ 1.74
DDR1-245ENST00000484556 RGPD2P0DJD1 1756 aa25.91■■□□□ 1.74
DDR1-245ENST00000484556 CICQ96RK0 1608 aaPredicted RBP25.89■■□□□ 1.74
DDR1-245ENST00000484556 TOGARAM1Q9Y4F4 1720 aa25.88■■□□□ 1.73
DDR1-245ENST00000484556 SBNO2Q9Y2G9 1366 aa25.88■■□□□ 1.73
DDR1-245ENST00000484556 MEGF6O75095 1541 aa25.88■■□□□ 1.73
DDR1-245ENST00000484556 TOMM70O94826 608 aa25.87■■□□□ 1.73
DDR1-245ENST00000484556 CD163L1Q9NR16 1453 aa25.86■■□□□ 1.73
DDR1-245ENST00000484556 HTRA3P83110 453 aa25.86■■□□□ 1.73
DDR1-245ENST00000484556 C4BP0C0L5 1744 aa25.84■■□□□ 1.73
DDR1-245ENST00000484556 ZCRB1Q8TBF4 217 aaKnown RBP25.84■■□□□ 1.73
DDR1-245ENST00000484556 AMIGO3Q86WK7 504 aa25.83■■□□□ 1.73
DDR1-245ENST00000484556 FLAD1Q8NFF5 587 aa25.83■■□□□ 1.73
DDR1-245ENST00000484556 IP6K1Q92551 441 aa25.83■■□□□ 1.73
DDR1-245ENST00000484556 SMIM5Q71RC9 77 aa25.82■■□□□ 1.72
DDR1-245ENST00000484556 UBR3Q6ZT12 1888 aa25.81■■□□□ 1.72
DDR1-245ENST00000484556 TNS4Q8IZW8 715 aa25.81■■□□□ 1.72
DDR1-245ENST00000484556 NMRK2Q9NPI5 230 aa25.81■■□□□ 1.72
DDR1-245ENST00000484556 PHF14O94880 888 aa25.8■■□□□ 1.72
DDR1-245ENST00000484556 KLRG1Q96E93 195 aa25.79■■□□□ 1.72
DDR1-245ENST00000484556 PALLDQ8WX93 1383 aa25.79■■□□□ 1.72
DDR1-245ENST00000484556 PRELPP51888 382 aa25.77■■□□□ 1.72
DDR1-245ENST00000484556 AK7Q96M32 723 aa25.77■■□□□ 1.72
DDR1-245ENST00000484556 KIAA1551Q9HCM1 1747 aa25.77■■□□□ 1.72
DDR1-245ENST00000484556 N4BP2Q86UW6 1770 aaPredicted RBP25.77■■□□□ 1.72
DDR1-245ENST00000484556 EDC4Q6P2E9 1401 aaKnown RBP25.75■■□□□ 1.71
DDR1-245ENST00000484556 JMYQ8N9B5 988 aa25.75■■□□□ 1.71
DDR1-245ENST00000484556 TMC1Q8TDI8 760 aa25.75■■□□□ 1.71
DDR1-245ENST00000484556 PXDNLA1KZ92 1463 aa25.73■■□□□ 1.71
DDR1-245ENST00000484556 ROCK2O75116 1388 aaKnown RBP25.73■■□□□ 1.71
DDR1-245ENST00000484556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.73■■□□□ 1.71
DDR1-245ENST00000484556 PCNTO95613 3336 aa25.73■■□□□ 1.71
DDR1-245ENST00000484556 HOXC9P31274 260 aa25.72■■□□□ 1.71
DDR1-245ENST00000484556 HDGFL2Q7Z4V5 671 aaPredicted RBP25.72■■□□□ 1.71
DDR1-245ENST00000484556 MAP3K19Q56UN5 1328 aa25.71■■□□□ 1.71
DDR1-245ENST00000484556 MPRIPQ6WCQ1 1025 aa25.71■■□□□ 1.71
DDR1-245ENST00000484556 USHBP1Q8N6Y0 703 aa25.71■■□□□ 1.71
DDR1-245ENST00000484556 RBM46Q8TBY0 533 aaKnown RBP25.71■■□□□ 1.71
DDR1-245ENST00000484556 ITGB4P16144 1822 aa25.71■■□□□ 1.71
DDR1-245ENST00000484556 A0A1W2PP64 1363 aa25.7■■□□□ 1.71
DDR1-245ENST00000484556 KIF13BQ9NQT8 1826 aa25.7■■□□□ 1.71
DDR1-245ENST00000484556 FBLN1P23142 703 aa25.7■■□□□ 1.7
DDR1-245ENST00000484556 SLC12A5Q9H2X9 1139 aa25.7■■□□□ 1.7
DDR1-245ENST00000484556 BCS1LQ9Y276 419 aa25.7■■□□□ 1.7
DDR1-245ENST00000484556 L3MBTL2Q969R5 705 aa25.69■■□□□ 1.7
DDR1-245ENST00000484556 AMPHP49418 695 aa25.68■■□□□ 1.7
DDR1-245ENST00000484556 ARHGAP27Q6ZUM4 889 aa25.67■■□□□ 1.7
DDR1-245ENST00000484556 C16orf71Q8IYS4 520 aaPredicted RBP25.67■■□□□ 1.7
DDR1-245ENST00000484556 NSD3Q9BZ95 1437 aa25.67■■□□□ 1.7
DDR1-245ENST00000484556 NBPF6Q5VWK0 638 aa25.66■■□□□ 1.7
DDR1-245ENST00000484556 NBPF4Q96M43 638 aa25.66■■□□□ 1.7
DDR1-245ENST00000484556 PKD1L3Q7Z443 1732 aa25.66■■□□□ 1.7
DDR1-245ENST00000484556 HMGB2P26583 209 aaKnown RBP25.64■■□□□ 1.7
DDR1-245ENST00000484556 SSFA2P28290 1259 aa25.64■■□□□ 1.7
DDR1-245ENST00000484556 RAPGEF4Q8WZA2 1011 aa25.64■■□□□ 1.7
DDR1-245ENST00000484556 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.7
DDR1-245ENST00000484556 A0A0G2JLW4 131 aa25.63■■□□□ 1.69
DDR1-245ENST00000484556 MMP10P09238 476 aa25.63■■□□□ 1.69
DDR1-245ENST00000484556 KCPQ6ZWJ8 1503 aa25.63■■□□□ 1.69
DDR1-245ENST00000484556 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
DDR1-245ENST00000484556 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
DDR1-245ENST00000484556 BRCA1P38398 1863 aaKnown RBP25.62■■□□□ 1.69
DDR1-245ENST00000484556 LINC00116Q8NCU8 138 aa25.62■■□□□ 1.69
DDR1-245ENST00000484556 CGNL1Q0VF96 1302 aa25.62■■□□□ 1.69
DDR1-245ENST00000484556 FSTL1Q12841 308 aa25.61■■□□□ 1.69
DDR1-245ENST00000484556 TERF2IPQ9NYB0 399 aa25.61■■□□□ 1.69
DDR1-245ENST00000484556 TATP17735 454 aaPredicted RBP25.6■■□□□ 1.69
DDR1-245ENST00000484556 C9orf131Q5VYM1 1079 aa25.6■■□□□ 1.69
DDR1-245ENST00000484556 SMARCC1Q92922 1105 aaPredicted RBP25.6■■□□□ 1.69
DDR1-245ENST00000484556 COG3Q96JB2 828 aa25.6■■□□□ 1.69
DDR1-245ENST00000484556 C10orf71Q711Q0 1435 aa25.59■■□□□ 1.69
DDR1-245ENST00000484556 GNPATO15228 680 aa25.58■■□□□ 1.69
DDR1-245ENST00000484556 FCHSD2O94868 740 aa25.58■■□□□ 1.69
DDR1-245ENST00000484556 RTL1A6NKG5 1358 aa25.57■■□□□ 1.68
DDR1-245ENST00000484556 PLEKHG2Q9H7P9 1386 aa25.57■■□□□ 1.68
DDR1-245ENST00000484556 CYP27B1O15528 508 aa25.57■■□□□ 1.68
DDR1-245ENST00000484556 TGFB2P61812 414 aa25.57■■□□□ 1.68
DDR1-245ENST00000484556 RRS1Q15050 365 aaKnown RBP25.57■■□□□ 1.68
DDR1-245ENST00000484556 TNRC6CQ9HCJ0 1690 aaKnown RBP25.57■■□□□ 1.68
DDR1-245ENST00000484556 ARFGEF1Q9Y6D6 1849 aa25.56■■□□□ 1.68
DDR1-245ENST00000484556 HSPA1AP0DMV8 641 aaKnown RBP25.56■■□□□ 1.68
DDR1-245ENST00000484556 HSPA1BP0DMV9 641 aaKnown RBP25.56■■□□□ 1.68
DDR1-245ENST00000484556 DPEP1P16444 411 aa25.56■■□□□ 1.68
DDR1-245ENST00000484556 PIGBQ92521 554 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms