RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 TNNQ9UQP3 1299 aa21.05■□□□□ 0.96
PCCB-217ENST00000484181 LRRC37A3O60309 1634 aa21.05■□□□□ 0.96
PCCB-217ENST00000484181 GCP02774 474 aa21.05■□□□□ 0.96
PCCB-217ENST00000484181 LTV1Q96GA3 475 aaPredicted RBP21.05■□□□□ 0.96
PCCB-217ENST00000484181 LMOD2Q6P5Q4 547 aa21.04■□□□□ 0.96
PCCB-217ENST00000484181 TSPYL6Q8N831 410 aa21.04■□□□□ 0.96
PCCB-217ENST00000484181 BACH2Q9BYV9 841 aa21.04■□□□□ 0.96
PCCB-217ENST00000484181 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
PCCB-217ENST00000484181 NPHP3Q7Z494 1330 aa21.04■□□□□ 0.96
PCCB-217ENST00000484181 STRCP1A6NGW2 1772 aa21.03■□□□□ 0.96
PCCB-217ENST00000484181 IGHDP01880 384 aa21.03■□□□□ 0.96
PCCB-217ENST00000484181 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
PCCB-217ENST00000484181 C8orf58Q8NAV2 365 aa21.03■□□□□ 0.96
PCCB-217ENST00000484181 SOS1Q07889 1333 aaPredicted RBP21.03■□□□□ 0.96
PCCB-217ENST00000484181 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
PCCB-217ENST00000484181 ALS2Q96Q42 1657 aa21.02■□□□□ 0.96
PCCB-217ENST00000484181 ARHGEF25Q86VW2 580 aa21.02■□□□□ 0.95
PCCB-217ENST00000484181 TSPYL4Q9UJ04 414 aa21.02■□□□□ 0.95
PCCB-217ENST00000484181 ELL2O00472 640 aaPredicted RBP21.01■□□□□ 0.95
PCCB-217ENST00000484181 HSPA2P54652 639 aa21.01■□□□□ 0.95
PCCB-217ENST00000484181 PCDHB15Q9Y5E8 787 aa21.01■□□□□ 0.95
PCCB-217ENST00000484181 ZBTB7CA1YPR0 619 aa21■□□□□ 0.95
PCCB-217ENST00000484181 XPCQ01831 940 aaPredicted RBP21■□□□□ 0.95
PCCB-217ENST00000484181 HDAC1Q13547 482 aaPredicted RBP21■□□□□ 0.95
PCCB-217ENST00000484181 ABCC4O15439 1325 aa21■□□□□ 0.95
PCCB-217ENST00000484181 FAM161AQ3B820 660 aa20.99■□□□□ 0.95
PCCB-217ENST00000484181 PTPRCP08575 1304 aa20.99■□□□□ 0.95
PCCB-217ENST00000484181 ABCC6O95255 1503 aa20.98■□□□□ 0.95
PCCB-217ENST00000484181 RGS3P49796 1198 aa20.98■□□□□ 0.95
PCCB-217ENST00000484181 ZBTB40Q9NUA8 1239 aa20.98■□□□□ 0.95
PCCB-217ENST00000484181 NCAPD2Q15021 1401 aa20.98■□□□□ 0.95
PCCB-217ENST00000484181 AMOTQ4VCS5 1084 aa20.97■□□□□ 0.95
PCCB-217ENST00000484181 TNS3Q68CZ2 1445 aa20.97■□□□□ 0.95
PCCB-217ENST00000484181 CHMP4AQ9BY43 222 aa20.96■□□□□ 0.95
PCCB-217ENST00000484181 CAMTA1Q9Y6Y1 1673 aa20.96■□□□□ 0.95
PCCB-217ENST00000484181 PLEKHO1Q53GL0 409 aaPredicted RBP20.96■□□□□ 0.95
PCCB-217ENST00000484181 NBPF6Q5VWK0 638 aa20.95■□□□□ 0.94
PCCB-217ENST00000484181 NBPF4Q96M43 638 aa20.95■□□□□ 0.94
PCCB-217ENST00000484181 ANKRD24Q8TF21 1146 aa20.94■□□□□ 0.94
PCCB-217ENST00000484181 TAF7Q15545 349 aaPredicted RBP20.93■□□□□ 0.94
PCCB-217ENST00000484181 ERICH6Q7L0X2 663 aa20.93■□□□□ 0.94
PCCB-217ENST00000484181 USHBP1Q8N6Y0 703 aa20.93■□□□□ 0.94
PCCB-217ENST00000484181 OVOS2A0A0G2JMS6 1433 aa20.93■□□□□ 0.94
PCCB-217ENST00000484181 KDM4FA0A1W2PPD8 638 aa20.93■□□□□ 0.94
PCCB-217ENST00000484181 STK31Q9BXU1 1019 aa20.93■□□□□ 0.94
PCCB-217ENST00000484181 STRCQ7RTU9 1775 aa20.93■□□□□ 0.94
PCCB-217ENST00000484181 PLEKHG2Q9H7P9 1386 aa20.92■□□□□ 0.94
PCCB-217ENST00000484181 MED1Q15648 1581 aaPredicted RBP20.91■□□□□ 0.94
PCCB-217ENST00000484181 LMO7Q8WWI1 1683 aa20.91■□□□□ 0.94
PCCB-217ENST00000484181 PXDNQ92626 1479 aa20.91■□□□□ 0.94
PCCB-217ENST00000484181 AKAP4Q5JQC9 854 aa20.91■□□□□ 0.94
PCCB-217ENST00000484181 SKAP1Q86WV1 359 aa20.91■□□□□ 0.94
PCCB-217ENST00000484181 CEMIPQ8WUJ3 1361 aa20.91■□□□□ 0.94
PCCB-217ENST00000484181 C1orf141Q5JVX7 400 aa20.9■□□□□ 0.94
PCCB-217ENST00000484181 ZBTB7BO15156 539 aaPredicted RBP20.89■□□□□ 0.94
PCCB-217ENST00000484181 CCDC30Q5VVM6 783 aa20.89■□□□□ 0.94
PCCB-217ENST00000484181 PDZRN3Q9UPQ7 1066 aa20.89■□□□□ 0.94
PCCB-217ENST00000484181 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.94
PCCB-217ENST00000484181 INTS3Q68E01 1043 aaKnown RBP20.89■□□□□ 0.93
PCCB-217ENST00000484181 ZNF530Q6P9A1 599 aaPredicted RBP20.89■□□□□ 0.93
PCCB-217ENST00000484181 ERBB3P21860 1342 aa20.88■□□□□ 0.93
PCCB-217ENST00000484181 SMC5Q8IY18 1101 aa20.88■□□□□ 0.93
PCCB-217ENST00000484181 IL17REQ8NFR9 667 aa20.88■□□□□ 0.93
PCCB-217ENST00000484181 IPO9Q96P70 1041 aaKnown RBP20.88■□□□□ 0.93
PCCB-217ENST00000484181 SPATA31A3Q5VYP0 1347 aa20.88■□□□□ 0.93
PCCB-217ENST00000484181 XIRP1Q702N8 1843 aaKnown RBP20.87■□□□□ 0.93
PCCB-217ENST00000484181 KRT24Q2M2I5 525 aa20.87■□□□□ 0.93
PCCB-217ENST00000484181 LRRC59Q96AG4 307 aaKnown RBP20.87■□□□□ 0.93
PCCB-217ENST00000484181 SLC4A2P04920 1241 aa20.86■□□□□ 0.93
PCCB-217ENST00000484181 GCC1Q96CN9 775 aa20.86■□□□□ 0.93
PCCB-217ENST00000484181 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
PCCB-217ENST00000484181 TEFQ10587 303 aa20.86■□□□□ 0.93
PCCB-217ENST00000484181 C8orf34Q49A92 452 aa20.86■□□□□ 0.93
PCCB-217ENST00000484181 DDRGK1Q96HY6 314 aa20.86■□□□□ 0.93
PCCB-217ENST00000484181 VIRMAQ69YN4 1812 aaKnown RBP20.85■□□□□ 0.93
PCCB-217ENST00000484181 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
PCCB-217ENST00000484181 HOXB7P09629 217 aa20.85■□□□□ 0.93
PCCB-217ENST00000484181 RGPD2P0DJD1 1756 aa20.85■□□□□ 0.93
PCCB-217ENST00000484181 CPDO75976 1380 aa20.84■□□□□ 0.93
PCCB-217ENST00000484181 ZC3H6P61129 1189 aaKnown RBP20.84■□□□□ 0.93
PCCB-217ENST00000484181 RGS12O14924 1447 aa20.84■□□□□ 0.93
PCCB-217ENST00000484181 CCT4P50991 539 aaKnown RBP20.83■□□□□ 0.93
PCCB-217ENST00000484181 BRINP3Q76B58 766 aa20.83■□□□□ 0.93
PCCB-217ENST00000484181 NPM2Q86SE8 214 aaKnown RBP20.83■□□□□ 0.93
PCCB-217ENST00000484181 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
PCCB-217ENST00000484181 CRYBG1Q9Y4K1 1723 aa20.82■□□□□ 0.92
PCCB-217ENST00000484181 AXIN2Q9Y2T1 843 aa20.81■□□□□ 0.92
PCCB-217ENST00000484181 NOP58Q9Y2X3 529 aaKnown RBP20.81■□□□□ 0.92
PCCB-217ENST00000484181 KDM3BQ7LBC6 1761 aa20.8■□□□□ 0.92
PCCB-217ENST00000484181 ZNF335Q9H4Z2 1342 aaPredicted RBP20.8■□□□□ 0.92
PCCB-217ENST00000484181 PXDNLA1KZ92 1463 aa20.8■□□□□ 0.92
PCCB-217ENST00000484181 CSB-PGBD3P0DP91 1061 aa20.8■□□□□ 0.92
PCCB-217ENST00000484181 DDX17Q92841 729 aaKnown RBP20.8■□□□□ 0.92
PCCB-217ENST00000484181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
PCCB-217ENST00000484181 SLAIN2Q9P270 581 aa20.8■□□□□ 0.92
PCCB-217ENST00000484181 ZBTB47Q9UFB7 747 aaPredicted RBP20.8■□□□□ 0.92
PCCB-217ENST00000484181 MSH5O43196 834 aa20.79■□□□□ 0.92
PCCB-217ENST00000484181 TATP17735 454 aaPredicted RBP20.79■□□□□ 0.92
PCCB-217ENST00000484181 NUCB1Q02818 461 aa20.79■□□□□ 0.92
PCCB-217ENST00000484181 UPF2Q9HAU5 1272 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms