RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PUS7Q96PZ0 661 aaKnown RBP9.46□□□□□ -0.9
BRCA1-216ENST00000484087 RGPD1P0DJD0 1748 aa9.46□□□□□ -0.9
BRCA1-216ENST00000484087 KIF7Q2M1P5 1343 aa9.45□□□□□ -0.9
BRCA1-216ENST00000484087 FAM208AQ9UK61 1670 aaKnown RBP9.45□□□□□ -0.9
BRCA1-216ENST00000484087 FYB1O15117 783 aa9.45□□□□□ -0.9
BRCA1-216ENST00000484087 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-216ENST00000484087 CSB-PGBD3P0DP91 1061 aa9.45□□□□□ -0.9
BRCA1-216ENST00000484087 ZNF579Q8NAF0 562 aaKnown RBP9.45□□□□□ -0.9
BRCA1-216ENST00000484087 KCNH5Q8NCM2 988 aa9.45□□□□□ -0.9
BRCA1-216ENST00000484087 MAP3K19Q56UN5 1328 aa9.44□□□□□ -0.9
BRCA1-216ENST00000484087 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
BRCA1-216ENST00000484087 TCP11L2Q8N4U5 519 aa9.44□□□□□ -0.9
BRCA1-216ENST00000484087 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
BRCA1-216ENST00000484087 COG3Q96JB2 828 aa9.44□□□□□ -0.9
BRCA1-216ENST00000484087 MAP2P11137 1827 aaKnown RBP9.44□□□□□ -0.9
BRCA1-216ENST00000484087 SBF2Q86WG5 1849 aa9.44□□□□□ -0.9
BRCA1-216ENST00000484087 ERBB3P21860 1342 aa9.43□□□□□ -0.9
BRCA1-216ENST00000484087 ABCC6O95255 1503 aa9.43□□□□□ -0.9
BRCA1-216ENST00000484087 SHANK3Q9BYB0 1731 aa9.43□□□□□ -0.9
BRCA1-216ENST00000484087 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
BRCA1-216ENST00000484087 DISP2A7MBM2 1401 aa9.42□□□□□ -0.9
BRCA1-216ENST00000484087 BLMP54132 1417 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-216ENST00000484087 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
BRCA1-216ENST00000484087 TNNT2P45379 298 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-216ENST00000484087 CNGB1Q14028 1251 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-216ENST00000484087 CDCA8Q53HL2 280 aa9.41□□□□□ -0.9
BRCA1-216ENST00000484087 PTF1AQ7RTS3 328 aa9.41□□□□□ -0.9
BRCA1-216ENST00000484087 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
BRCA1-216ENST00000484087 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
BRCA1-216ENST00000484087 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
BRCA1-216ENST00000484087 TRIM37O94972 964 aa9.4□□□□□ -0.9
BRCA1-216ENST00000484087 HOXC9P31274 260 aa9.4□□□□□ -0.9
BRCA1-216ENST00000484087 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
BRCA1-216ENST00000484087 BARGINQ6ZT62 677 aa9.4□□□□□ -0.9
BRCA1-216ENST00000484087 PANK3Q9H999 370 aa9.4□□□□□ -0.9
BRCA1-216ENST00000484087 NLRP2Q9NX02 1062 aa9.4□□□□□ -0.9
BRCA1-216ENST00000484087 AMPHP49418 695 aa9.4□□□□□ -0.91
BRCA1-216ENST00000484087 MEGF6O75095 1541 aa9.4□□□□□ -0.91
BRCA1-216ENST00000484087 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
BRCA1-216ENST00000484087 DOT1LQ8TEK3 1739 aa9.39□□□□□ -0.91
BRCA1-216ENST00000484087 RREB1Q92766 1687 aa9.39□□□□□ -0.91
BRCA1-216ENST00000484087 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
BRCA1-216ENST00000484087 PPM1GO15355 546 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-216ENST00000484087 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-216ENST00000484087 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
BRCA1-216ENST00000484087 HSP90AB2PQ58FF8 381 aa9.39□□□□□ -0.91
BRCA1-216ENST00000484087 DDB1Q16531 1140 aa9.38□□□□□ -0.91
BRCA1-216ENST00000484087 MARCH10Q8NA82 808 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-216ENST00000484087 IP6K1Q92551 441 aa9.38□□□□□ -0.91
BRCA1-216ENST00000484087 CARD10Q9BWT7 1032 aa9.38□□□□□ -0.91
BRCA1-216ENST00000484087 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
BRCA1-216ENST00000484087 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
BRCA1-216ENST00000484087 NHSQ6T4R5 1651 aa9.37□□□□□ -0.91
BRCA1-216ENST00000484087 KAT6BQ8WYB5 2073 aa9.37□□□□□ -0.91
BRCA1-216ENST00000484087 CGNL1Q0VF96 1302 aa9.37□□□□□ -0.91
BRCA1-216ENST00000484087 RTL1A6NKG5 1358 aa9.36□□□□□ -0.91
BRCA1-216ENST00000484087 EZH2Q15910 746 aaKnown RBP9.36□□□□□ -0.91
BRCA1-216ENST00000484087 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
BRCA1-216ENST00000484087 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
BRCA1-216ENST00000484087 PRKRIP1Q9H875 184 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-216ENST00000484087 BTAF1O14981 1849 aa9.36□□□□□ -0.91
BRCA1-216ENST00000484087 FLT4P35916 1363 aa9.35□□□□□ -0.91
BRCA1-216ENST00000484087 TOGARAM1Q9Y4F4 1720 aa9.35□□□□□ -0.91
BRCA1-216ENST00000484087 PSDA5PKW4 1024 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-216ENST00000484087 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
BRCA1-216ENST00000484087 SF3B2Q13435 895 aaKnown RBP9.35□□□□□ -0.91
BRCA1-216ENST00000484087 ACSBG1Q96GR2 724 aa9.35□□□□□ -0.91
BRCA1-216ENST00000484087 APBA3O96018 575 aa9.34□□□□□ -0.91
BRCA1-216ENST00000484087 IL2RBP14784 551 aa9.34□□□□□ -0.91
BRCA1-216ENST00000484087 FAM196AQ6ZSG2 479 aa9.34□□□□□ -0.91
BRCA1-216ENST00000484087 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
BRCA1-216ENST00000484087 INSRP06213 1382 aa9.34□□□□□ -0.91
BRCA1-216ENST00000484087 KCNQ2O43526 872 aa9.34□□□□□ -0.91
BRCA1-216ENST00000484087 CC2D1BQ5T0F9 858 aaKnown RBP9.34□□□□□ -0.91
BRCA1-216ENST00000484087 POLKQ9UBT6 870 aa9.34□□□□□ -0.91
BRCA1-216ENST00000484087 PKD1L3Q7Z443 1732 aa9.33□□□□□ -0.92
BRCA1-216ENST00000484087 SMG6Q86US8 1419 aaKnown RBP9.33□□□□□ -0.92
BRCA1-216ENST00000484087 EXOC5O00471 708 aa9.33□□□□□ -0.92
BRCA1-216ENST00000484087 BAG6P46379 1132 aa9.33□□□□□ -0.92
BRCA1-216ENST00000484087 DDX54Q8TDD1 881 aaKnown RBP9.33□□□□□ -0.92
BRCA1-216ENST00000484087 GALR2O43603 387 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-216ENST00000484087 PLCB2Q00722 1185 aa9.32□□□□□ -0.92
BRCA1-216ENST00000484087 CCDC125Q86Z20 511 aa9.32□□□□□ -0.92
BRCA1-216ENST00000484087 RGPD3A6NKT7 1758 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-216ENST00000484087 RGPD4Q7Z3J3 1758 aa9.31□□□□□ -0.92
BRCA1-216ENST00000484087 EIF4A2Q14240 407 aaKnown RBP9.31□□□□□ -0.92
BRCA1-216ENST00000484087 RALBP1Q15311 655 aa9.31□□□□□ -0.92
BRCA1-216ENST00000484087 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
BRCA1-216ENST00000484087 CAMKK2Q96RR4 588 aa9.31□□□□□ -0.92
BRCA1-216ENST00000484087 MRS2Q9HD23 443 aa9.31□□□□□ -0.92
BRCA1-216ENST00000484087 KNSTRNQ9Y448 316 aa9.31□□□□□ -0.92
BRCA1-216ENST00000484087 ITGB4P16144 1822 aa9.31□□□□□ -0.92
BRCA1-216ENST00000484087 PER1O15534 1290 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-216ENST00000484087 VASPP50552 380 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-216ENST00000484087 R3HDM1Q15032 1099 aaKnown RBP9.29□□□□□ -0.92
BRCA1-216ENST00000484087 EYA1Q99502 592 aa9.29□□□□□ -0.92
BRCA1-216ENST00000484087 CDCA7Q9BWT1 371 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-216ENST00000484087 NSD2O96028 1365 aa9.29□□□□□ -0.92
BRCA1-216ENST00000484087 NCAPD2Q15021 1401 aa9.29□□□□□ -0.92
BRCA1-216ENST00000484087 TUBGCP6Q96RT7 1819 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms