RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
SHROOM4-204ENST00000483955 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
SHROOM4-204ENST00000483955 CARD10Q9BWT7 1032 aa11.94□□□□□ -0.5
SHROOM4-204ENST00000483955 RGPD2P0DJD1 1756 aa11.94□□□□□ -0.5
SHROOM4-204ENST00000483955 PRKAR2BP31323 418 aa11.93□□□□□ -0.5
SHROOM4-204ENST00000483955 LARP1Q6PKG0 1096 aaKnown RBP11.93□□□□□ -0.5
SHROOM4-204ENST00000483955 UNC5CLQ8IV45 518 aa11.93□□□□□ -0.5
SHROOM4-204ENST00000483955 NGEFQ8N5V2 710 aa11.93□□□□□ -0.5
SHROOM4-204ENST00000483955 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
SHROOM4-204ENST00000483955 PARP4Q9UKK3 1724 aaKnown RBP11.93□□□□□ -0.5
SHROOM4-204ENST00000483955 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
SHROOM4-204ENST00000483955 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
SHROOM4-204ENST00000483955 RAPGEF4Q8WZA2 1011 aa11.92□□□□□ -0.5
SHROOM4-204ENST00000483955 PLEKHF1Q96S99 279 aa11.92□□□□□ -0.5
SHROOM4-204ENST00000483955 USP21Q9UK80 565 aa11.92□□□□□ -0.5
SHROOM4-204ENST00000483955 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
SHROOM4-204ENST00000483955 AFF2P51816 1311 aa11.91□□□□□ -0.5
SHROOM4-204ENST00000483955 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
SHROOM4-204ENST00000483955 VPS72Q15906 364 aa11.91□□□□□ -0.5
SHROOM4-204ENST00000483955 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
SHROOM4-204ENST00000483955 USHBP1Q8N6Y0 703 aa11.91□□□□□ -0.5
SHROOM4-204ENST00000483955 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
SHROOM4-204ENST00000483955 HNRNPUQ00839 825 aaKnown RBP eCLIP11.9□□□□□ -0.5
SHROOM4-204ENST00000483955 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
SHROOM4-204ENST00000483955 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
SHROOM4-204ENST00000483955 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
SHROOM4-204ENST00000483955 MEGF6O75095 1541 aa11.9□□□□□ -0.5
SHROOM4-204ENST00000483955 SPATA31A1Q5TZJ5 1347 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 IL2RBP14784 551 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 TCP11L2Q8N4U5 519 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
SHROOM4-204ENST00000483955 DISP2A7MBM2 1401 aa11.88□□□□□ -0.51
SHROOM4-204ENST00000483955 ATRNO75882 1429 aa11.88□□□□□ -0.51
SHROOM4-204ENST00000483955 APAF1O14727 1248 aa11.88□□□□□ -0.51
SHROOM4-204ENST00000483955 LMOD3Q0VAK6 560 aa11.88□□□□□ -0.51
SHROOM4-204ENST00000483955 NFE2L2Q16236 605 aa11.88□□□□□ -0.51
SHROOM4-204ENST00000483955 PLEKHO1Q53GL0 409 aaPredicted RBP11.88□□□□□ -0.51
SHROOM4-204ENST00000483955 ZNF772Q68DY9 489 aaPredicted RBP11.88□□□□□ -0.51
SHROOM4-204ENST00000483955 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
SHROOM4-204ENST00000483955 FKBP8Q14318 412 aa11.87□□□□□ -0.51
SHROOM4-204ENST00000483955 BARGINQ6ZT62 677 aa11.87□□□□□ -0.51
SHROOM4-204ENST00000483955 USP35Q9P2H5 1018 aa11.87□□□□□ -0.51
SHROOM4-204ENST00000483955 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
SHROOM4-204ENST00000483955 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 CCDC27Q2M243 656 aa11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 PHACTR3Q96KR7 559 aa11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
SHROOM4-204ENST00000483955 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
SHROOM4-204ENST00000483955 C1orf141Q5JVX7 400 aa11.85□□□□□ -0.51
SHROOM4-204ENST00000483955 GLI3P10071 1580 aa11.84□□□□□ -0.51
SHROOM4-204ENST00000483955 MAP3K5Q99683 1374 aa11.84□□□□□ -0.51
SHROOM4-204ENST00000483955 HTATSF1O43719 755 aaKnown RBP11.84□□□□□ -0.51
SHROOM4-204ENST00000483955 RIPK4P57078 832 aa11.84□□□□□ -0.51
SHROOM4-204ENST00000483955 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
SHROOM4-204ENST00000483955 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
SHROOM4-204ENST00000483955 GJD4Q96KN9 370 aaPredicted RBP11.84□□□□□ -0.51
SHROOM4-204ENST00000483955 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 RRP7AQ9Y3A4 280 aaKnown RBP11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
SHROOM4-204ENST00000483955 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 GNAT3A8MTJ3 354 aa11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 HAX1O00165 279 aa11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 NEUROD2Q15784 382 aa11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 DDB1Q16531 1140 aa11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 IFNL2Q8IZJ0 200 aa11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 SHANK3Q9BYB0 1731 aa11.82□□□□□ -0.52
SHROOM4-204ENST00000483955 EXOC5O00471 708 aa11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 PDE3BQ13370 1112 aa11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 FAM98CQ17RN3 349 aaKnown RBP11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 WDR63Q8IWG1 891 aa11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 ZNF521Q96K83 1311 aa11.81□□□□□ -0.52
SHROOM4-204ENST00000483955 A0A0G2JS52 829 aa11.8□□□□□ -0.52
SHROOM4-204ENST00000483955 PHKG2P15735 406 aa11.8□□□□□ -0.52
SHROOM4-204ENST00000483955 MYT1Q01538 1121 aa11.8□□□□□ -0.52
SHROOM4-204ENST00000483955 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
SHROOM4-204ENST00000483955 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
SHROOM4-204ENST00000483955 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
SHROOM4-204ENST00000483955 IL16Q14005 1332 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms