RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 COL23A1Q86Y22 540 aaPredicted RBP15.57■□□□□ 0.08
SMARCC1-205ENST00000483847 FAM208AQ9UK61 1670 aaKnown RBP15.57■□□□□ 0.08
SMARCC1-205ENST00000483847 MSL1Q68DK7 614 aa15.56■□□□□ 0.08
SMARCC1-205ENST00000483847 SIN3AQ96ST3 1273 aa15.56■□□□□ 0.08
SMARCC1-205ENST00000483847 RGPD2P0DJD1 1756 aa15.55■□□□□ 0.08
SMARCC1-205ENST00000483847 MSH5O43196 834 aa15.55■□□□□ 0.08
SMARCC1-205ENST00000483847 TMC1Q8TDI8 760 aa15.55■□□□□ 0.08
SMARCC1-205ENST00000483847 IP6K1Q92551 441 aa15.55■□□□□ 0.08
SMARCC1-205ENST00000483847 SLC12A5Q9H2X9 1139 aa15.55■□□□□ 0.08
SMARCC1-205ENST00000483847 CCNL1Q9UK58 526 aaPredicted RBP15.55■□□□□ 0.08
SMARCC1-205ENST00000483847 EDC4Q6P2E9 1401 aaKnown RBP15.54■□□□□ 0.08
SMARCC1-205ENST00000483847 MEGF6O75095 1541 aa15.53■□□□□ 0.08
SMARCC1-205ENST00000483847 HDGFL2Q7Z4V5 671 aaPredicted RBP15.53■□□□□ 0.08
SMARCC1-205ENST00000483847 A0A1W2PP64 1363 aa15.52■□□□□ 0.08
SMARCC1-205ENST00000483847 FBLN1P23142 703 aa15.52■□□□□ 0.08
SMARCC1-205ENST00000483847 ADCY9O60503 1353 aa15.51■□□□□ 0.07
SMARCC1-205ENST00000483847 C5P01031 1676 aa15.51■□□□□ 0.07
SMARCC1-205ENST00000483847 ZCRB1Q8TBF4 217 aaKnown RBP15.51■□□□□ 0.07
SMARCC1-205ENST00000483847 ZNF526Q8TF50 670 aaPredicted RBP15.51■□□□□ 0.07
SMARCC1-205ENST00000483847 GPBP1L1Q9HC44 474 aaPredicted RBP15.51■□□□□ 0.07
SMARCC1-205ENST00000483847 MAP3K19Q56UN5 1328 aa15.5■□□□□ 0.07
SMARCC1-205ENST00000483847 USP47Q96K76 1375 aa15.49■□□□□ 0.07
SMARCC1-205ENST00000483847 HSPA6P17066 643 aa15.49■□□□□ 0.07
SMARCC1-205ENST00000483847 HOXC9P31274 260 aa15.49■□□□□ 0.07
SMARCC1-205ENST00000483847 NEUROD1Q13562 356 aa15.49■□□□□ 0.07
SMARCC1-205ENST00000483847 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
SMARCC1-205ENST00000483847 CD2APQ9Y5K6 639 aa15.48■□□□□ 0.07
SMARCC1-205ENST00000483847 TAF1LQ8IZX4 1826 aa15.47■□□□□ 0.07
SMARCC1-205ENST00000483847 WWC3Q9ULE0 1092 aa15.47■□□□□ 0.07
SMARCC1-205ENST00000483847 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.07
SMARCC1-205ENST00000483847 AMIGO3Q86WK7 504 aa15.46■□□□□ 0.07
SMARCC1-205ENST00000483847 USHBP1Q8N6Y0 703 aa15.46■□□□□ 0.07
SMARCC1-205ENST00000483847 AMPHP49418 695 aa15.45■□□□□ 0.06
SMARCC1-205ENST00000483847 NBPF6Q5VWK0 638 aa15.45■□□□□ 0.06
SMARCC1-205ENST00000483847 NBPF4Q96M43 638 aa15.45■□□□□ 0.06
SMARCC1-205ENST00000483847 CARD11Q9BXL7 1154 aa15.45■□□□□ 0.06
SMARCC1-205ENST00000483847 SMIM5Q71RC9 77 aa15.44■□□□□ 0.06
SMARCC1-205ENST00000483847 COG3Q96JB2 828 aa15.44■□□□□ 0.06
SMARCC1-205ENST00000483847 C4BP0C0L5 1744 aa15.43■□□□□ 0.06
SMARCC1-205ENST00000483847 PALLDQ8WX93 1383 aa15.43■□□□□ 0.06
SMARCC1-205ENST00000483847 IGSF1Q8N6C5 1336 aa15.43■□□□□ 0.06
SMARCC1-205ENST00000483847 RRS1Q15050 365 aaKnown RBP15.42■□□□□ 0.06
SMARCC1-205ENST00000483847 UBR3Q6ZT12 1888 aa15.42■□□□□ 0.06
SMARCC1-205ENST00000483847 KIF3CO14782 793 aa15.41■□□□□ 0.06
SMARCC1-205ENST00000483847 MPRIPQ6WCQ1 1025 aa15.41■□□□□ 0.06
SMARCC1-205ENST00000483847 FLAD1Q8NFF5 587 aa15.41■□□□□ 0.06
SMARCC1-205ENST00000483847 RTL1A6NKG5 1358 aa15.4■□□□□ 0.06
SMARCC1-205ENST00000483847 RAPGEF4Q8WZA2 1011 aa15.4■□□□□ 0.06
SMARCC1-205ENST00000483847 ITGB4P16144 1822 aa15.4■□□□□ 0.06
SMARCC1-205ENST00000483847 CGNL1Q0VF96 1302 aa15.4■□□□□ 0.06
SMARCC1-205ENST00000483847 PHF14O94880 888 aa15.39■□□□□ 0.05
SMARCC1-205ENST00000483847 PUS7Q96PZ0 661 aaKnown RBP15.39■□□□□ 0.05
SMARCC1-205ENST00000483847 CYP27B1O15528 508 aa15.38■□□□□ 0.05
SMARCC1-205ENST00000483847 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
SMARCC1-205ENST00000483847 AK7Q96M32 723 aa15.38■□□□□ 0.05
SMARCC1-205ENST00000483847 PCDH11XQ9BZA7 1347 aa15.38■□□□□ 0.05
SMARCC1-205ENST00000483847 PCDH11YQ9BZA8 1340 aa15.38■□□□□ 0.05
SMARCC1-205ENST00000483847 CICQ96RK0 1608 aaPredicted RBP15.37■□□□□ 0.05
SMARCC1-205ENST00000483847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.37■□□□□ 0.05
SMARCC1-205ENST00000483847 TESK2Q96S53 571 aa15.37■□□□□ 0.05
SMARCC1-205ENST00000483847 MAP2P11137 1827 aaKnown RBP15.36■□□□□ 0.05
SMARCC1-205ENST00000483847 HSP90AB2PQ58FF8 381 aa15.36■□□□□ 0.05
SMARCC1-205ENST00000483847 GGNBP2Q9H3C7 697 aa15.36■□□□□ 0.05
SMARCC1-205ENST00000483847 SMG6Q86US8 1419 aaKnown RBP15.35■□□□□ 0.05
SMARCC1-205ENST00000483847 KIAA1551Q9HCM1 1747 aa15.35■□□□□ 0.05
SMARCC1-205ENST00000483847 FYB1O15117 783 aa15.35■□□□□ 0.05
SMARCC1-205ENST00000483847 LINC00116Q8NCU8 138 aa15.35■□□□□ 0.05
SMARCC1-205ENST00000483847 DNAJC5GQ8N7S2 189 aa15.34■□□□□ 0.05
SMARCC1-205ENST00000483847 PIGBQ92521 554 aa15.34■□□□□ 0.05
SMARCC1-205ENST00000483847 SMARCC1Q92922 1105 aaPredicted RBP15.34■□□□□ 0.05
SMARCC1-205ENST00000483847 INSRP06213 1382 aa15.34■□□□□ 0.05
SMARCC1-205ENST00000483847 PKD1L3Q7Z443 1732 aa15.34■□□□□ 0.05
SMARCC1-205ENST00000483847 APLP1P51693 650 aa15.33■□□□□ 0.04
SMARCC1-205ENST00000483847 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.04
SMARCC1-205ENST00000483847 N4BP2Q86UW6 1770 aaPredicted RBP15.32■□□□□ 0.04
SMARCC1-205ENST00000483847 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
SMARCC1-205ENST00000483847 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
SMARCC1-205ENST00000483847 SSFA2P28290 1259 aa15.32■□□□□ 0.04
SMARCC1-205ENST00000483847 NSD3Q9BZ95 1437 aa15.32■□□□□ 0.04
SMARCC1-205ENST00000483847 KIF13BQ9NQT8 1826 aa15.31■□□□□ 0.04
SMARCC1-205ENST00000483847 LOC102724428A0A0B4J2F2 783 aa15.31■□□□□ 0.04
SMARCC1-205ENST00000483847 SIK1P57059 783 aa15.31■□□□□ 0.04
SMARCC1-205ENST00000483847 ITPK1Q13572 414 aa15.31■□□□□ 0.04
SMARCC1-205ENST00000483847 GNPATO15228 680 aa15.3■□□□□ 0.04
SMARCC1-205ENST00000483847 TOMM70O94826 608 aa15.3■□□□□ 0.04
SMARCC1-205ENST00000483847 MMP10P09238 476 aa15.3■□□□□ 0.04
SMARCC1-205ENST00000483847 FLT4P35916 1363 aa15.3■□□□□ 0.04
SMARCC1-205ENST00000483847 NMRK2Q9NPI5 230 aa15.3■□□□□ 0.04
SMARCC1-205ENST00000483847 KIF20BQ96Q89 1820 aa15.29■□□□□ 0.04
SMARCC1-205ENST00000483847 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
SMARCC1-205ENST00000483847 WDR90Q96KV7 1748 aa15.29■□□□□ 0.04
SMARCC1-205ENST00000483847 A0A0G2JLW4 131 aa15.28■□□□□ 0.04
SMARCC1-205ENST00000483847 NKX1-1Q15270 411 aaPredicted RBP15.28■□□□□ 0.04
SMARCC1-205ENST00000483847 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
SMARCC1-205ENST00000483847 NCAPD2Q15021 1401 aa15.27■□□□□ 0.04
SMARCC1-205ENST00000483847 EMILIN1Q9Y6C2 1016 aa15.27■□□□□ 0.04
SMARCC1-205ENST00000483847 C10orf71Q711Q0 1435 aa15.26■□□□□ 0.03
SMARCC1-205ENST00000483847 KIF24Q5T7B8 1368 aa15.26■□□□□ 0.03
SMARCC1-205ENST00000483847 ATP6V1AP38606 617 aa15.26■□□□□ 0.03
SMARCC1-205ENST00000483847 HTRA3P83110 453 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms