RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 PLEKHO1Q53GL0 409 aaPredicted RBP22.36■■□□□ 1.17
MRPL28-210ENST00000483764 SLFN5Q08AF3 891 aa22.36■■□□□ 1.17
MRPL28-210ENST00000483764 AMOTQ4VCS5 1084 aa22.36■■□□□ 1.17
MRPL28-210ENST00000483764 E9PSI1 815 aa22.35■■□□□ 1.17
MRPL28-210ENST00000483764 TATP17735 454 aaPredicted RBP22.35■■□□□ 1.17
MRPL28-210ENST00000483764 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
MRPL28-210ENST00000483764 CRB1P82279 1406 aa22.34■■□□□ 1.17
MRPL28-210ENST00000483764 TRMT2AQ8IZ69 625 aaKnown RBP22.32■■□□□ 1.16
MRPL28-210ENST00000483764 NGLY1Q96IV0 654 aa22.32■■□□□ 1.16
MRPL28-210ENST00000483764 C8orf37Q96NL8 207 aa22.32■■□□□ 1.16
MRPL28-210ENST00000483764 IL16Q14005 1332 aa22.32■■□□□ 1.16
MRPL28-210ENST00000483764 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
MRPL28-210ENST00000483764 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
MRPL28-210ENST00000483764 RTF1Q92541 710 aaKnown RBP22.31■■□□□ 1.16
MRPL28-210ENST00000483764 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
MRPL28-210ENST00000483764 GNAT3A8MTJ3 354 aa22.31■■□□□ 1.16
MRPL28-210ENST00000483764 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
MRPL28-210ENST00000483764 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
MRPL28-210ENST00000483764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.31■■□□□ 1.16
MRPL28-210ENST00000483764 SLIT2O94813 1529 aa22.31■■□□□ 1.16
MRPL28-210ENST00000483764 LRP6O75581 1613 aa22.3■■□□□ 1.16
MRPL28-210ENST00000483764 MEGF6O75095 1541 aa22.3■■□□□ 1.16
MRPL28-210ENST00000483764 DCTN1Q14203 1278 aa22.3■■□□□ 1.16
MRPL28-210ENST00000483764 ZNF530Q6P9A1 599 aaPredicted RBP22.3■■□□□ 1.16
MRPL28-210ENST00000483764 USP35Q9P2H5 1018 aa22.3■■□□□ 1.16
MRPL28-210ENST00000483764 PLCH1Q4KWH8 1693 aa22.29■■□□□ 1.16
MRPL28-210ENST00000483764 SPG7Q9UQ90 795 aa22.29■■□□□ 1.16
MRPL28-210ENST00000483764 MAP3K5Q99683 1374 aa22.29■■□□□ 1.16
MRPL28-210ENST00000483764 IL2RBP14784 551 aa22.28■■□□□ 1.16
MRPL28-210ENST00000483764 MYT1Q01538 1121 aa22.28■■□□□ 1.16
MRPL28-210ENST00000483764 MCM10Q7L590 875 aa22.28■■□□□ 1.16
MRPL28-210ENST00000483764 MYH16Q9H6N6 1097 aa22.28■■□□□ 1.16
MRPL28-210ENST00000483764 AKAP4Q5JQC9 854 aa22.27■■□□□ 1.16
MRPL28-210ENST00000483764 MEX3CQ5U5Q3 659 aaKnown RBP22.27■■□□□ 1.16
MRPL28-210ENST00000483764 FNBP4Q8N3X1 1017 aaPredicted RBP22.27■■□□□ 1.16
MRPL28-210ENST00000483764 DLG5Q8TDM6 1919 aa22.27■■□□□ 1.16
MRPL28-210ENST00000483764 C1orf141Q5JVX7 400 aa22.26■■□□□ 1.15
MRPL28-210ENST00000483764 UNC5CLQ8IV45 518 aa22.26■■□□□ 1.15
MRPL28-210ENST00000483764 OVOS2A0A0G2JMS6 1433 aa22.25■■□□□ 1.15
MRPL28-210ENST00000483764 NWD2Q9ULI1 1742 aa22.25■■□□□ 1.15
MRPL28-210ENST00000483764 NRAPQ86VF7 1730 aa22.24■■□□□ 1.15
MRPL28-210ENST00000483764 GNAI1P63096 354 aa22.24■■□□□ 1.15
MRPL28-210ENST00000483764 IL17REQ8NFR9 667 aa22.24■■□□□ 1.15
MRPL28-210ENST00000483764 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
MRPL28-210ENST00000483764 SPATA31A1Q5TZJ5 1347 aa22.24■■□□□ 1.15
MRPL28-210ENST00000483764 ZCRB1Q8TBF4 217 aaKnown RBP22.23■■□□□ 1.15
MRPL28-210ENST00000483764 LAS1LQ9Y4W2 734 aaKnown RBP22.23■■□□□ 1.15
MRPL28-210ENST00000483764 BCL9LQ86UU0 1499 aa22.23■■□□□ 1.15
MRPL28-210ENST00000483764 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
MRPL28-210ENST00000483764 CFAP44Q96MT7 982 aa22.22■■□□□ 1.15
MRPL28-210ENST00000483764 THRAP3Q9Y2W1 955 aaKnown RBP22.22■■□□□ 1.15
MRPL28-210ENST00000483764 SPATA31A5Q5VU36 1347 aa22.22■■□□□ 1.15
MRPL28-210ENST00000483764 SPATA31A7Q8IWB4 1347 aa22.22■■□□□ 1.15
MRPL28-210ENST00000483764 IFNL2Q8IZJ0 200 aa22.21■■□□□ 1.15
MRPL28-210ENST00000483764 TSR2Q969E8 191 aaKnown RBP22.21■■□□□ 1.15
MRPL28-210ENST00000483764 USP21Q9UK80 565 aa22.21■■□□□ 1.15
MRPL28-210ENST00000483764 CCDC9Q9Y3X0 531 aaKnown RBP22.21■■□□□ 1.15
MRPL28-210ENST00000483764 FANCIQ9NVI1 1328 aa22.21■■□□□ 1.15
MRPL28-210ENST00000483764 PHKG2P15735 406 aa22.21■■□□□ 1.15
MRPL28-210ENST00000483764 VPS72Q15906 364 aa22.21■■□□□ 1.15
MRPL28-210ENST00000483764 MPRIPQ6WCQ1 1025 aa22.21■■□□□ 1.15
MRPL28-210ENST00000483764 CYP27B1O15528 508 aa22.2■■□□□ 1.14
MRPL28-210ENST00000483764 LGR6Q9HBX8 967 aa22.2■■□□□ 1.14
MRPL28-210ENST00000483764 PARP4Q9UKK3 1724 aaKnown RBP22.19■■□□□ 1.14
MRPL28-210ENST00000483764 IRX6P78412 446 aaPredicted RBP22.19■■□□□ 1.14
MRPL28-210ENST00000483764 CDCA7Q9BWT1 371 aaPredicted RBP22.19■■□□□ 1.14
MRPL28-210ENST00000483764 CEMIPQ8WUJ3 1361 aa22.19■■□□□ 1.14
MRPL28-210ENST00000483764 DISP2A7MBM2 1401 aa22.19■■□□□ 1.14
MRPL28-210ENST00000483764 CHL1O00533 1208 aa22.18■■□□□ 1.14
MRPL28-210ENST00000483764 RNMTO43148 476 aaKnown RBP22.18■■□□□ 1.14
MRPL28-210ENST00000483764 RCAN3Q9UKA8 241 aa22.18■■□□□ 1.14
MRPL28-210ENST00000483764 PCDH11XQ9BZA7 1347 aa22.18■■□□□ 1.14
MRPL28-210ENST00000483764 PCDH11YQ9BZA8 1340 aa22.18■■□□□ 1.14
MRPL28-210ENST00000483764 AFF2P51816 1311 aa22.17■■□□□ 1.14
MRPL28-210ENST00000483764 PKD1L3Q7Z443 1732 aa22.17■■□□□ 1.14
MRPL28-210ENST00000483764 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
MRPL28-210ENST00000483764 HSP90AB1P08238 724 aaKnown RBP22.16■■□□□ 1.14
MRPL28-210ENST00000483764 TAF7Q15545 349 aaPredicted RBP22.16■■□□□ 1.14
MRPL28-210ENST00000483764 BARGINQ6ZT62 677 aa22.16■■□□□ 1.14
MRPL28-210ENST00000483764 RRP1P56182 461 aaKnown RBP22.15■■□□□ 1.14
MRPL28-210ENST00000483764 EXOSC9Q06265 439 aaKnown RBP22.15■■□□□ 1.14
MRPL28-210ENST00000483764 ILDR2Q71H61 639 aa22.15■■□□□ 1.14
MRPL28-210ENST00000483764 DDX54Q8TDD1 881 aaKnown RBP22.15■■□□□ 1.14
MRPL28-210ENST00000483764 DCAF5Q96JK2 942 aa22.15■■□□□ 1.14
MRPL28-210ENST00000483764 EXOC5O00471 708 aa22.14■■□□□ 1.13
MRPL28-210ENST00000483764 TEFQ10587 303 aa22.14■■□□□ 1.13
MRPL28-210ENST00000483764 BABAM1Q9NWV8 329 aa22.14■■□□□ 1.13
MRPL28-210ENST00000483764 MIS18AQ9NYP9 233 aa22.13■■□□□ 1.13
MRPL28-210ENST00000483764 TSPYL4Q9UJ04 414 aa22.13■■□□□ 1.13
MRPL28-210ENST00000483764 LRRC37A3O60309 1634 aa22.13■■□□□ 1.13
MRPL28-210ENST00000483764 NKX1-1Q15270 411 aaPredicted RBP22.12■■□□□ 1.13
MRPL28-210ENST00000483764 CT47B1P0C2W7 299 aaPredicted RBP22.11■■□□□ 1.13
MRPL28-210ENST00000483764 RBM19Q9Y4C8 960 aaKnown RBP22.11■■□□□ 1.13
MRPL28-210ENST00000483764 KDM6AO15550 1401 aaPredicted RBP22.11■■□□□ 1.13
MRPL28-210ENST00000483764 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.1■■□□□ 1.13
MRPL28-210ENST00000483764 DDB1Q16531 1140 aa22.1■■□□□ 1.13
MRPL28-210ENST00000483764 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
MRPL28-210ENST00000483764 TRPC5Q9UL62 973 aaPredicted RBP22.1■■□□□ 1.13
MRPL28-210ENST00000483764 ADAMTS7Q9UKP4 1686 aa22.09■■□□□ 1.13
MRPL28-210ENST00000483764 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms