RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
COMMD2-205ENST00000483708 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
COMMD2-205ENST00000483708 NBPF14Q5TI25 921 aa17.07■□□□□ 0.32
COMMD2-205ENST00000483708 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
COMMD2-205ENST00000483708 MEGF6O75095 1541 aa17.06■□□□□ 0.32
COMMD2-205ENST00000483708 R3HDM1Q15032 1099 aaKnown RBP17.06■□□□□ 0.32
COMMD2-205ENST00000483708 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
COMMD2-205ENST00000483708 PRIM1P49642 420 aaKnown RBP17.05■□□□□ 0.32
COMMD2-205ENST00000483708 MTHFSP49914 203 aa17.05■□□□□ 0.32
COMMD2-205ENST00000483708 PROM2Q8N271 834 aa17.05■□□□□ 0.32
COMMD2-205ENST00000483708 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
COMMD2-205ENST00000483708 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
COMMD2-205ENST00000483708 PCDH11XQ9BZA7 1347 aa17.03■□□□□ 0.32
COMMD2-205ENST00000483708 PCDH11YQ9BZA8 1340 aa17.03■□□□□ 0.32
COMMD2-205ENST00000483708 TXNRD1Q16881 649 aa17.03■□□□□ 0.32
COMMD2-205ENST00000483708 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.32
COMMD2-205ENST00000483708 FAM208AQ9UK61 1670 aaKnown RBP17.02■□□□□ 0.32
COMMD2-205ENST00000483708 CYP27B1O15528 508 aa17.02■□□□□ 0.32
COMMD2-205ENST00000483708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.32
COMMD2-205ENST00000483708 IGSF1Q8N6C5 1336 aa17.01■□□□□ 0.31
COMMD2-205ENST00000483708 IL13P35225 146 aa17.01■□□□□ 0.31
COMMD2-205ENST00000483708 WNK3Q9BYP7 1800 aa17■□□□□ 0.31
COMMD2-205ENST00000483708 NCAPD2Q15021 1401 aa17■□□□□ 0.31
COMMD2-205ENST00000483708 TNS1Q9HBL0 1735 aaKnown RBP17■□□□□ 0.31
COMMD2-205ENST00000483708 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
COMMD2-205ENST00000483708 DIAPH1O60610 1272 aaKnown RBP16.98■□□□□ 0.31
COMMD2-205ENST00000483708 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
COMMD2-205ENST00000483708 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
COMMD2-205ENST00000483708 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
COMMD2-205ENST00000483708 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
COMMD2-205ENST00000483708 NKX1-1Q15270 411 aaPredicted RBP16.97■□□□□ 0.31
COMMD2-205ENST00000483708 PHKG2P15735 406 aa16.96■□□□□ 0.31
COMMD2-205ENST00000483708 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
COMMD2-205ENST00000483708 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
COMMD2-205ENST00000483708 STK32BQ9NY57 414 aa16.96■□□□□ 0.31
COMMD2-205ENST00000483708 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.3
COMMD2-205ENST00000483708 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.3
COMMD2-205ENST00000483708 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
COMMD2-205ENST00000483708 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
COMMD2-205ENST00000483708 HMOX1P09601 288 aa16.93■□□□□ 0.3
COMMD2-205ENST00000483708 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
COMMD2-205ENST00000483708 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
COMMD2-205ENST00000483708 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
COMMD2-205ENST00000483708 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
COMMD2-205ENST00000483708 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
COMMD2-205ENST00000483708 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
COMMD2-205ENST00000483708 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
COMMD2-205ENST00000483708 SBF2Q86WG5 1849 aa16.91■□□□□ 0.3
COMMD2-205ENST00000483708 PLEKHG2Q9H7P9 1386 aa16.91■□□□□ 0.3
COMMD2-205ENST00000483708 U2SURPO15042 1029 aaKnown RBP16.91■□□□□ 0.3
COMMD2-205ENST00000483708 KCNQ4P56696 695 aa16.91■□□□□ 0.3
COMMD2-205ENST00000483708 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
COMMD2-205ENST00000483708 PIGBQ92521 554 aa16.91■□□□□ 0.3
COMMD2-205ENST00000483708 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
COMMD2-205ENST00000483708 SMARCC1Q92922 1105 aaPredicted RBP16.9■□□□□ 0.3
COMMD2-205ENST00000483708 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
COMMD2-205ENST00000483708 TMOD3Q9NYL9 352 aa16.9■□□□□ 0.3
COMMD2-205ENST00000483708 CCNL1Q9UK58 526 aaPredicted RBP16.9■□□□□ 0.3
COMMD2-205ENST00000483708 NHSQ6T4R5 1651 aa16.9■□□□□ 0.3
COMMD2-205ENST00000483708 KDRP35968 1356 aa16.89■□□□□ 0.3
COMMD2-205ENST00000483708 ERVV-2B6SEH9 535 aa16.88■□□□□ 0.29
COMMD2-205ENST00000483708 ZNF827Q17R98 1081 aa16.87■□□□□ 0.29
COMMD2-205ENST00000483708 PDGFDQ9GZP0 370 aaPredicted RBP16.87■□□□□ 0.29
COMMD2-205ENST00000483708 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
COMMD2-205ENST00000483708 RREB1Q92766 1687 aa16.86■□□□□ 0.29
COMMD2-205ENST00000483708 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
COMMD2-205ENST00000483708 CABP4P57796 275 aa16.86■□□□□ 0.29
COMMD2-205ENST00000483708 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
COMMD2-205ENST00000483708 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
COMMD2-205ENST00000483708 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
COMMD2-205ENST00000483708 TFCP2L1Q9NZI6 479 aa16.85■□□□□ 0.29
COMMD2-205ENST00000483708 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
COMMD2-205ENST00000483708 PALLDQ8WX93 1383 aa16.85■□□□□ 0.29
COMMD2-205ENST00000483708 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
COMMD2-205ENST00000483708 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
COMMD2-205ENST00000483708 ZBTB7AO95365 584 aa16.84■□□□□ 0.29
COMMD2-205ENST00000483708 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
COMMD2-205ENST00000483708 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
COMMD2-205ENST00000483708 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
COMMD2-205ENST00000483708 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
COMMD2-205ENST00000483708 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
COMMD2-205ENST00000483708 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
COMMD2-205ENST00000483708 RALBP1Q15311 655 aa16.82■□□□□ 0.28
COMMD2-205ENST00000483708 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
COMMD2-205ENST00000483708 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
COMMD2-205ENST00000483708 BTAF1O14981 1849 aa16.82■□□□□ 0.28
COMMD2-205ENST00000483708 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
COMMD2-205ENST00000483708 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
COMMD2-205ENST00000483708 LOC102724428A0A0B4J2F2 783 aa16.81■□□□□ 0.28
COMMD2-205ENST00000483708 SIK1P57059 783 aa16.81■□□□□ 0.28
COMMD2-205ENST00000483708 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
COMMD2-205ENST00000483708 DOT1LQ8TEK3 1739 aa16.8■□□□□ 0.28
COMMD2-205ENST00000483708 PPP1R1BQ9UD71 204 aaPredicted RBP16.8■□□□□ 0.28
COMMD2-205ENST00000483708 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
COMMD2-205ENST00000483708 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
COMMD2-205ENST00000483708 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
COMMD2-205ENST00000483708 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
COMMD2-205ENST00000483708 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
COMMD2-205ENST00000483708 GAS2L2Q8NHY3 880 aa16.79■□□□□ 0.28
COMMD2-205ENST00000483708 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms