RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 FSHRP23945 695 aa13.37□□□□□ -0.27
MCF2-207ENST00000483690 SLC19A1P41440 591 aa13.37□□□□□ -0.27
MCF2-207ENST00000483690 CCDC102BQ68D86 513 aa13.37□□□□□ -0.27
MCF2-207ENST00000483690 ESF1Q9H501 851 aaKnown RBP13.37□□□□□ -0.27
MCF2-207ENST00000483690 PCDHGA11Q9Y5H2 935 aa13.37□□□□□ -0.27
MCF2-207ENST00000483690 SWI5Q1ZZU3 235 aa13.36□□□□□ -0.27
MCF2-207ENST00000483690 MPNDQ8N594 471 aa13.36□□□□□ -0.27
MCF2-207ENST00000483690 TPCN2Q8NHX9 752 aa13.36□□□□□ -0.27
MCF2-207ENST00000483690 EMID1Q96A84 441 aaPredicted RBP13.36□□□□□ -0.27
MCF2-207ENST00000483690 TLL2Q9Y6L7 1015 aa13.36□□□□□ -0.27
MCF2-207ENST00000483690 SEC13P55735 322 aa13.35□□□□□ -0.27
MCF2-207ENST00000483690 DHX9Q08211 1270 aaKnown RBP13.35□□□□□ -0.27
MCF2-207ENST00000483690 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
MCF2-207ENST00000483690 CLP1Q92989 425 aaKnown RBP13.35□□□□□ -0.27
MCF2-207ENST00000483690 WNT7AO00755 349 aa13.34□□□□□ -0.27
MCF2-207ENST00000483690 DKK1O94907 266 aa13.33□□□□□ -0.28
MCF2-207ENST00000483690 GRM5P41594 1212 aa13.33□□□□□ -0.28
MCF2-207ENST00000483690 SCTRP47872 440 aa13.33□□□□□ -0.28
MCF2-207ENST00000483690 SIAH2O43255 324 aa13.32□□□□□ -0.28
MCF2-207ENST00000483690 ADH1CP00326 375 aa13.32□□□□□ -0.28
MCF2-207ENST00000483690 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
MCF2-207ENST00000483690 IVNS1ABPQ9Y6Y0 642 aa13.32□□□□□ -0.28
MCF2-207ENST00000483690 ERVK-9P63128 1117 aa13.31□□□□□ -0.28
MCF2-207ENST00000483690 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
MCF2-207ENST00000483690 MRGPRX2Q96LB1 330 aa13.31□□□□□ -0.28
MCF2-207ENST00000483690 SFI1A8K8P3 1242 aa13.3□□□□□ -0.28
MCF2-207ENST00000483690 SSFA2P28290 1259 aa13.3□□□□□ -0.28
MCF2-207ENST00000483690 NR5A1Q13285 461 aa13.3□□□□□ -0.28
MCF2-207ENST00000483690 TMPRSS4Q9NRS4 437 aa13.3□□□□□ -0.28
MCF2-207ENST00000483690 ATP2B4P23634 1241 aa13.29□□□□□ -0.28
MCF2-207ENST00000483690 CCDC116Q8IYX3 515 aa13.29□□□□□ -0.28
MCF2-207ENST00000483690 CYLDQ9NQC7 956 aa13.29□□□□□ -0.28
MCF2-207ENST00000483690 SLAIN2Q9P270 581 aa13.29□□□□□ -0.28
MCF2-207ENST00000483690 SPRYD7Q5W111 196 aa13.28□□□□□ -0.28
MCF2-207ENST00000483690 PHLDB3Q6NSJ2 640 aa13.28□□□□□ -0.28
MCF2-207ENST00000483690 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.29
MCF2-207ENST00000483690 GNEQ9Y223 722 aaKnown RBP13.27□□□□□ -0.29
MCF2-207ENST00000483690 PPP1R26Q5T8A7 1209 aaPredicted RBP13.26□□□□□ -0.29
MCF2-207ENST00000483690 ZNF697Q5TEC3 545 aa13.26□□□□□ -0.29
MCF2-207ENST00000483690 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
MCF2-207ENST00000483690 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
MCF2-207ENST00000483690 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
MCF2-207ENST00000483690 MYT1Q01538 1121 aa13.25□□□□□ -0.29
MCF2-207ENST00000483690 OSBPL3Q9H4L5 887 aa13.25□□□□□ -0.29
MCF2-207ENST00000483690 PRMT3O60678 531 aa13.24□□□□□ -0.29
MCF2-207ENST00000483690 ARID4AP29374 1257 aaPredicted RBP13.24□□□□□ -0.29
MCF2-207ENST00000483690 ZNF598Q86UK7 904 aaKnown RBP13.24□□□□□ -0.29
MCF2-207ENST00000483690 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
MCF2-207ENST00000483690 A0A0G2JS52 829 aa13.23□□□□□ -0.29
MCF2-207ENST00000483690 M0R2N6 131 aa13.23□□□□□ -0.29
MCF2-207ENST00000483690 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
MCF2-207ENST00000483690 ALDH1A1P00352 501 aa13.22□□□□□ -0.29
MCF2-207ENST00000483690 NR3C2P08235 984 aa13.22□□□□□ -0.29
MCF2-207ENST00000483690 FOXC1Q12948 553 aa13.22□□□□□ -0.29
MCF2-207ENST00000483690 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
MCF2-207ENST00000483690 TXNDC2Q86VQ3 553 aa13.22□□□□□ -0.29
MCF2-207ENST00000483690 ZNF358Q9NW07 568 aa13.22□□□□□ -0.29
MCF2-207ENST00000483690 EMILIN1Q9Y6C2 1016 aa13.22□□□□□ -0.29
MCF2-207ENST00000483690 LILRA1O75019 489 aa13.21□□□□□ -0.29
MCF2-207ENST00000483690 TSEN2Q8NCE0 465 aaKnown RBP13.21□□□□□ -0.29
MCF2-207ENST00000483690 PRIMPOLQ96LW4 560 aa13.21□□□□□ -0.29
MCF2-207ENST00000483690 WASF2Q9Y6W5 498 aa13.21□□□□□ -0.29
MCF2-207ENST00000483690 GDF10P55107 478 aa13.2□□□□□ -0.3
MCF2-207ENST00000483690 C1orf216Q8TAB5 229 aa13.2□□□□□ -0.3
MCF2-207ENST00000483690 CXXC1Q9P0U4 656 aaPredicted RBP13.2□□□□□ -0.3
MCF2-207ENST00000483690 TMEM229AB2RXF0 380 aa13.19□□□□□ -0.3
MCF2-207ENST00000483690 BACH1O14867 736 aa13.19□□□□□ -0.3
MCF2-207ENST00000483690 OCLNQ16625 522 aa13.19□□□□□ -0.3
MCF2-207ENST00000483690 SND1Q7KZF4 910 aaKnown RBP eCLIP13.19□□□□□ -0.3
MCF2-207ENST00000483690 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
MCF2-207ENST00000483690 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
MCF2-207ENST00000483690 V9GY48 417 aaPredicted RBP13.19□□□□□ -0.3
MCF2-207ENST00000483690 LGR5O75473 907 aa13.18□□□□□ -0.3
MCF2-207ENST00000483690 SCNN1DP51172 638 aa13.18□□□□□ -0.3
MCF2-207ENST00000483690 MFAP1P55081 439 aaKnown RBP13.18□□□□□ -0.3
MCF2-207ENST00000483690 NNTQ13423 1086 aa13.18□□□□□ -0.3
MCF2-207ENST00000483690 PKD2L1Q9P0L9 805 aa13.18□□□□□ -0.3
MCF2-207ENST00000483690 WASLO00401 505 aaPredicted RBP13.17□□□□□ -0.3
MCF2-207ENST00000483690 SNIP1Q8TAD8 396 aaKnown RBP13.17□□□□□ -0.3
MCF2-207ENST00000483690 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
MCF2-207ENST00000483690 GNRH1P01148 92 aa13.16□□□□□ -0.3
MCF2-207ENST00000483690 INHAP05111 366 aa13.16□□□□□ -0.3
MCF2-207ENST00000483690 ADD1P35611 737 aaKnown RBP13.15□□□□□ -0.3
MCF2-207ENST00000483690 ESCO1Q5FWF5 840 aa13.15□□□□□ -0.3
MCF2-207ENST00000483690 ETNK1Q9HBU6 452 aa13.15□□□□□ -0.3
MCF2-207ENST00000483690 WEE1P30291 646 aa13.14□□□□□ -0.31
MCF2-207ENST00000483690 TAS1R3Q7RTX0 852 aa13.14□□□□□ -0.31
MCF2-207ENST00000483690 SERTAD1Q9UHV2 236 aa13.14□□□□□ -0.31
MCF2-207ENST00000483690 TTC24A2A3L6 582 aaPredicted RBP13.13□□□□□ -0.31
MCF2-207ENST00000483690 SCNN1AP37088 669 aa13.12□□□□□ -0.31
MCF2-207ENST00000483690 CCDC27Q2M243 656 aa13.12□□□□□ -0.31
MCF2-207ENST00000483690 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
MCF2-207ENST00000483690 SERPINB4P48594 390 aa13.11□□□□□ -0.31
MCF2-207ENST00000483690 CYP4X1Q8N118 509 aa13.11□□□□□ -0.31
MCF2-207ENST00000483690 ARHGEF10LQ9HCE6 1279 aa13.11□□□□□ -0.31
MCF2-207ENST00000483690 RAB6BQ9NRW1 208 aa13.11□□□□□ -0.31
MCF2-207ENST00000483690 ADH1AP07327 375 aa13.1□□□□□ -0.31
MCF2-207ENST00000483690 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
MCF2-207ENST00000483690 IGFBP4P22692 258 aa13.09□□□□□ -0.31
MCF2-207ENST00000483690 SCG3Q8WXD2 468 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms