RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
RTCA-204ENST00000483474 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
RTCA-204ENST00000483474 NHSQ6T4R5 1651 aa23.78■■□□□ 1.4
RTCA-204ENST00000483474 NUP188Q5SRE5 1749 aa23.77■■□□□ 1.4
RTCA-204ENST00000483474 KCNQ2O43526 872 aa23.75■■□□□ 1.39
RTCA-204ENST00000483474 PTF1AQ7RTS3 328 aa23.73■■□□□ 1.39
RTCA-204ENST00000483474 MEGF6O75095 1541 aa23.73■■□□□ 1.39
RTCA-204ENST00000483474 SYTL4Q96C24 671 aaPredicted RBP23.72■■□□□ 1.39
RTCA-204ENST00000483474 BTAF1O14981 1849 aa23.72■■□□□ 1.39
RTCA-204ENST00000483474 PCDH11XQ9BZA7 1347 aa23.71■■□□□ 1.39
RTCA-204ENST00000483474 PCDH11YQ9BZA8 1340 aa23.71■■□□□ 1.39
RTCA-204ENST00000483474 TXNRD1Q16881 649 aa23.71■■□□□ 1.39
RTCA-204ENST00000483474 SPG7Q9UQ90 795 aa23.69■■□□□ 1.38
RTCA-204ENST00000483474 SHANK3Q9BYB0 1731 aa23.69■■□□□ 1.38
RTCA-204ENST00000483474 EYA1Q99502 592 aa23.68■■□□□ 1.38
RTCA-204ENST00000483474 PRIM1P49642 420 aaKnown RBP23.67■■□□□ 1.38
RTCA-204ENST00000483474 DOT1LQ8TEK3 1739 aa23.67■■□□□ 1.38
RTCA-204ENST00000483474 EIF4A2Q14240 407 aaKnown RBP23.66■■□□□ 1.38
RTCA-204ENST00000483474 STK32BQ9NY57 414 aa23.66■■□□□ 1.38
RTCA-204ENST00000483474 SRCAPQ6ZRS2 3230 aa23.66■■□□□ 1.38
RTCA-204ENST00000483474 LRP5O75197 1615 aa23.66■■□□□ 1.38
RTCA-204ENST00000483474 AMER1Q5JTC6 1135 aaPredicted RBP23.65■■□□□ 1.38
RTCA-204ENST00000483474 PROM2Q8N271 834 aa23.64■■□□□ 1.37
RTCA-204ENST00000483474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.63■■□□□ 1.373e-6■■□□□ 13.5
RTCA-204ENST00000483474 NCAPD2Q15021 1401 aa23.62■■□□□ 1.37
RTCA-204ENST00000483474 HMGB2P26583 209 aaKnown RBP23.62■■□□□ 1.37
RTCA-204ENST00000483474 CC2D1BQ5T0F9 858 aaKnown RBP23.62■■□□□ 1.37
RTCA-204ENST00000483474 PKD1L3Q7Z443 1732 aa23.62■■□□□ 1.37
RTCA-204ENST00000483474 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
RTCA-204ENST00000483474 SLC27A3Q5K4L6 730 aa23.6■■□□□ 1.37
RTCA-204ENST00000483474 PLEKHG2Q9H7P9 1386 aa23.58■■□□□ 1.37
RTCA-204ENST00000483474 CYP27B1O15528 508 aa23.58■■□□□ 1.37
RTCA-204ENST00000483474 SLC15A2Q16348 729 aa23.58■■□□□ 1.37
RTCA-204ENST00000483474 IFNL2Q8IZJ0 200 aa23.58■■□□□ 1.37
RTCA-204ENST00000483474 IGSF1Q8N6C5 1336 aa23.58■■□□□ 1.36
RTCA-204ENST00000483474 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
RTCA-204ENST00000483474 SPON1Q9HCB6 807 aa23.57■■□□□ 1.36
RTCA-204ENST00000483474 ANO8Q9HCE9 1232 aaPredicted RBP23.57■■□□□ 1.36
RTCA-204ENST00000483474 NPC1L1Q9UHC9 1359 aa23.56■■□□□ 1.36
RTCA-204ENST00000483474 MTHFSP49914 203 aa23.56■■□□□ 1.36
RTCA-204ENST00000483474 PLEKHO1Q53GL0 409 aaPredicted RBP23.56■■□□□ 1.36
RTCA-204ENST00000483474 ITGB4P16144 1822 aa23.55■■□□□ 1.36
RTCA-204ENST00000483474 MPRIPQ6WCQ1 1025 aa23.55■■□□□ 1.36
RTCA-204ENST00000483474 AMOTQ4VCS5 1084 aa23.54■■□□□ 1.36
RTCA-204ENST00000483474 PPP1R1BQ9UD71 204 aaPredicted RBP23.54■■□□□ 1.36
RTCA-204ENST00000483474 LY75O60449 1722 aa23.53■■□□□ 1.36
RTCA-204ENST00000483474 NKX1-1Q15270 411 aaPredicted RBP23.53■■□□□ 1.36
RTCA-204ENST00000483474 HSP90AB1P08238 724 aaKnown RBP23.52■■□□□ 1.36
RTCA-204ENST00000483474 SMARCC1Q92922 1105 aaPredicted RBP23.52■■□□□ 1.36
RTCA-204ENST00000483474 CCNL1Q9UK58 526 aaPredicted RBP23.52■■□□□ 1.36
RTCA-204ENST00000483474 PHKG2P15735 406 aa23.51■■□□□ 1.35
RTCA-204ENST00000483474 SULT6B1Q6IMI4 303 aa23.51■■□□□ 1.35
RTCA-204ENST00000483474 IL13P35225 146 aa23.5■■□□□ 1.35
RTCA-204ENST00000483474 LRRC4BQ9NT99 713 aa23.5■■□□□ 1.35
RTCA-204ENST00000483474 TMOD3Q9NYL9 352 aa23.5■■□□□ 1.35
RTCA-204ENST00000483474 DIAPH1O60610 1272 aaKnown RBP23.49■■□□□ 1.35
RTCA-204ENST00000483474 C1orf141Q5JVX7 400 aa23.49■■□□□ 1.35
RTCA-204ENST00000483474 ZNF530Q6P9A1 599 aaPredicted RBP23.48■■□□□ 1.35
RTCA-204ENST00000483474 TFCP2L1Q9NZI6 479 aa23.48■■□□□ 1.35
RTCA-204ENST00000483474 CASZ1Q86V15 1759 aa23.47■■□□□ 1.35
RTCA-204ENST00000483474 PAPPAQ13219 1627 aa23.47■■□□□ 1.35
RTCA-204ENST00000483474 PALLDQ8WX93 1383 aa23.46■■□□□ 1.35
RTCA-204ENST00000483474 DCAF5Q96JK2 942 aa23.46■■□□□ 1.35
RTCA-204ENST00000483474 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
RTCA-204ENST00000483474 TOGARAM1Q9Y4F4 1720 aa23.46■■□□□ 1.35
RTCA-204ENST00000483474 ZBTB7AO95365 584 aa23.45■■□□□ 1.34
RTCA-204ENST00000483474 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
RTCA-204ENST00000483474 ERVV-2B6SEH9 535 aa23.44■■□□□ 1.34
RTCA-204ENST00000483474 KCNQ4P56696 695 aa23.44■■□□□ 1.34
RTCA-204ENST00000483474 PIGBQ92521 554 aa23.44■■□□□ 1.34
RTCA-204ENST00000483474 MTFR1LQ9H019 292 aa23.44■■□□□ 1.34
RTCA-204ENST00000483474 KDRP35968 1356 aa23.43■■□□□ 1.34
RTCA-204ENST00000483474 QSER1Q2KHR3 1735 aa23.43■■□□□ 1.34
RTCA-204ENST00000483474 ZNF827Q17R98 1081 aa23.43■■□□□ 1.34
RTCA-204ENST00000483474 AKT1S1Q96B36 256 aa23.43■■□□□ 1.34
RTCA-204ENST00000483474 ATF5Q9Y2D1 282 aaPredicted RBP23.43■■□□□ 1.34
RTCA-204ENST00000483474 PDGFDQ9GZP0 370 aaPredicted RBP23.42■■□□□ 1.34
RTCA-204ENST00000483474 HMOX1P09601 288 aa23.41■■□□□ 1.34
RTCA-204ENST00000483474 CABP4P57796 275 aa23.41■■□□□ 1.34
RTCA-204ENST00000483474 SLC16A10Q8TF71 515 aa23.41■■□□□ 1.34
RTCA-204ENST00000483474 C5P01031 1676 aa23.41■■□□□ 1.34
RTCA-204ENST00000483474 TAF1LQ8IZX4 1826 aa23.4■■□□□ 1.34
RTCA-204ENST00000483474 DCAF8L1A6NGE4 600 aa23.4■■□□□ 1.34
RTCA-204ENST00000483474 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
RTCA-204ENST00000483474 MSH5O43196 834 aa23.39■■□□□ 1.33
RTCA-204ENST00000483474 NUDCQ9Y266 331 aa23.39■■□□□ 1.33
RTCA-204ENST00000483474 AKAP4Q5JQC9 854 aa23.37■■□□□ 1.33
RTCA-204ENST00000483474 FLAD1Q8NFF5 587 aa23.37■■□□□ 1.33
RTCA-204ENST00000483474 TUBGCP6Q96RT7 1819 aa23.36■■□□□ 1.33
RTCA-204ENST00000483474 LOC102724428A0A0B4J2F2 783 aa23.36■■□□□ 1.33
RTCA-204ENST00000483474 SIK1P57059 783 aa23.36■■□□□ 1.33
RTCA-204ENST00000483474 AK7Q96M32 723 aa23.36■■□□□ 1.33
RTCA-204ENST00000483474 ASAP1Q9ULH1 1129 aa23.36■■□□□ 1.33
RTCA-204ENST00000483474 POLD1P28340 1107 aa23.35■■□□□ 1.33
RTCA-204ENST00000483474 PNPLA7Q6ZV29 1317 aa23.34■■□□□ 1.33
RTCA-204ENST00000483474 ATP6V1AP38606 617 aa23.34■■□□□ 1.33
RTCA-204ENST00000483474 SCN11AQ9UI33 1791 aa23.34■■□□□ 1.33
RTCA-204ENST00000483474 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.33
RTCA-204ENST00000483474 ATG3Q9NT62 314 aa23.33■■□□□ 1.33
RTCA-204ENST00000483474 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms