RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 RALBP1Q15311 655 aa21.96■■□□□ 1.11
COL2A1-206ENST00000483376 PKD1L3Q7Z443 1732 aa21.95■■□□□ 1.1
COL2A1-206ENST00000483376 SHANK3Q9BYB0 1731 aa21.95■■□□□ 1.1
COL2A1-206ENST00000483376 DIAPH1O60610 1272 aaKnown RBP21.95■■□□□ 1.1
COL2A1-206ENST00000483376 SF3B2Q13435 895 aaKnown RBP21.94■■□□□ 1.1
COL2A1-206ENST00000483376 PCDH11XQ9BZA7 1347 aa21.94■■□□□ 1.1
COL2A1-206ENST00000483376 PCDH11YQ9BZA8 1340 aa21.94■■□□□ 1.1
COL2A1-206ENST00000483376 TNS1Q9HBL0 1735 aaKnown RBP21.94■■□□□ 1.1
COL2A1-206ENST00000483376 CFAP53Q96M91 514 aa21.93■■□□□ 1.1
COL2A1-206ENST00000483376 BCL11BQ9C0K0 894 aaPredicted RBP21.92■■□□□ 1.1
COL2A1-206ENST00000483376 SBF2Q86WG5 1849 aa21.92■■□□□ 1.1
COL2A1-206ENST00000483376 TRIM37O94972 964 aa21.91■■□□□ 1.1
COL2A1-206ENST00000483376 CNGB1Q14028 1251 aaPredicted RBP21.91■■□□□ 1.1
COL2A1-206ENST00000483376 SPG7Q9UQ90 795 aa21.91■■□□□ 1.1
COL2A1-206ENST00000483376 BAG6P46379 1132 aa21.9■■□□□ 1.1
COL2A1-206ENST00000483376 SULT6B1Q6IMI4 303 aa21.89■■□□□ 1.09
COL2A1-206ENST00000483376 NHSQ6T4R5 1651 aa21.88■■□□□ 1.09
COL2A1-206ENST00000483376 AMOTQ4VCS5 1084 aa21.88■■□□□ 1.09
COL2A1-206ENST00000483376 DDX54Q8TDD1 881 aaKnown RBP21.88■■□□□ 1.09
COL2A1-206ENST00000483376 CYP27B1O15528 508 aa21.87■■□□□ 1.09
COL2A1-206ENST00000483376 NKX1-1Q15270 411 aaPredicted RBP21.87■■□□□ 1.09
COL2A1-206ENST00000483376 AEBP1Q8IUX7 1158 aa21.87■■□□□ 1.09
COL2A1-206ENST00000483376 RGPD3A6NKT7 1758 aaPredicted RBP21.86■■□□□ 1.09
COL2A1-206ENST00000483376 RGPD4Q7Z3J3 1758 aa21.86■■□□□ 1.09
COL2A1-206ENST00000483376 MYBBP1AQ9BQG0 1328 aaKnown RBP21.85■■□□□ 1.09
COL2A1-206ENST00000483376 PLSCR1O15162 318 aa21.85■■□□□ 1.09
COL2A1-206ENST00000483376 NUDCQ9Y266 331 aa21.85■■□□□ 1.09
COL2A1-206ENST00000483376 APBA3O96018 575 aa21.84■■□□□ 1.09
COL2A1-206ENST00000483376 PLEKHO1Q53GL0 409 aaPredicted RBP21.84■■□□□ 1.09
COL2A1-206ENST00000483376 DEFB132Q7Z7B7 95 aa21.84■■□□□ 1.09
COL2A1-206ENST00000483376 PRKRIP1Q9H875 184 aaPredicted RBP21.84■■□□□ 1.09
COL2A1-206ENST00000483376 IFNL2Q8IZJ0 200 aa21.83■■□□□ 1.09
COL2A1-206ENST00000483376 CAMKK2Q96RR4 588 aa21.83■■□□□ 1.09
COL2A1-206ENST00000483376 PHKG2P15735 406 aa21.82■■□□□ 1.08
COL2A1-206ENST00000483376 KCNQ2O43526 872 aa21.81■■□□□ 1.08
COL2A1-206ENST00000483376 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
COL2A1-206ENST00000483376 EN1Q05925 392 aaPredicted RBP21.8■■□□□ 1.08
COL2A1-206ENST00000483376 U2SURPO15042 1029 aaKnown RBP21.79■■□□□ 1.08
COL2A1-206ENST00000483376 HMOX1P09601 288 aa21.79■■□□□ 1.08
COL2A1-206ENST00000483376 PTF1AQ7RTS3 328 aa21.79■■□□□ 1.08
COL2A1-206ENST00000483376 DOT1LQ8TEK3 1739 aa21.79■■□□□ 1.08
COL2A1-206ENST00000483376 ACSBG1Q96GR2 724 aa21.78■■□□□ 1.08
COL2A1-206ENST00000483376 RREB1Q92766 1687 aa21.77■■□□□ 1.08
COL2A1-206ENST00000483376 FCHSD2O94868 740 aa21.77■■□□□ 1.08
COL2A1-206ENST00000483376 PRIM1P49642 420 aaKnown RBP21.77■■□□□ 1.08
COL2A1-206ENST00000483376 RSPH6AQ9H0K4 717 aa21.77■■□□□ 1.08
COL2A1-206ENST00000483376 EZH2Q15910 746 aaKnown RBP21.76■■□□□ 1.07
COL2A1-206ENST00000483376 ZNF530Q6P9A1 599 aaPredicted RBP21.76■■□□□ 1.07
COL2A1-206ENST00000483376 DCAF5Q96JK2 942 aa21.76■■□□□ 1.07
COL2A1-206ENST00000483376 BTAF1O14981 1849 aa21.76■■□□□ 1.07
COL2A1-206ENST00000483376 TOGARAM1Q9Y4F4 1720 aa21.75■■□□□ 1.07
COL2A1-206ENST00000483376 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
COL2A1-206ENST00000483376 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.07
COL2A1-206ENST00000483376 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
COL2A1-206ENST00000483376 C1orf141Q5JVX7 400 aa21.74■■□□□ 1.07
COL2A1-206ENST00000483376 ERVV-2B6SEH9 535 aa21.73■■□□□ 1.07
COL2A1-206ENST00000483376 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
COL2A1-206ENST00000483376 GAS2L2Q8NHY3 880 aa21.72■■□□□ 1.07
COL2A1-206ENST00000483376 PRKAR2BP31323 418 aa21.71■■□□□ 1.07
COL2A1-206ENST00000483376 MTHFSDQ2M296 383 aaKnown RBP21.71■■□□□ 1.07
COL2A1-206ENST00000483376 ADAMTS7Q9UKP4 1686 aa21.7■■□□□ 1.06
COL2A1-206ENST00000483376 PROM2Q8N271 834 aa21.7■■□□□ 1.06
COL2A1-206ENST00000483376 SYTL4Q96C24 671 aaPredicted RBP21.7■■□□□ 1.06
COL2A1-206ENST00000483376 NUP188Q5SRE5 1749 aa21.69■■□□□ 1.06
COL2A1-206ENST00000483376 KAT6BQ8WYB5 2073 aa21.69■■□□□ 1.06
COL2A1-206ENST00000483376 TXNRD1Q16881 649 aa21.69■■□□□ 1.06
COL2A1-206ENST00000483376 PNNQ9H307 717 aaKnown RBP21.69■■□□□ 1.06
COL2A1-206ENST00000483376 ITGB4P16144 1822 aa21.69■■□□□ 1.06
COL2A1-206ENST00000483376 SLC27A3Q5K4L6 730 aa21.68■■□□□ 1.06
COL2A1-206ENST00000483376 PIGBQ92521 554 aa21.68■■□□□ 1.06
COL2A1-206ENST00000483376 MRC1P22897 1456 aa21.67■■□□□ 1.06
COL2A1-206ENST00000483376 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
COL2A1-206ENST00000483376 SMARCC1Q92922 1105 aaPredicted RBP21.67■■□□□ 1.06
COL2A1-206ENST00000483376 TMOD3Q9NYL9 352 aa21.67■■□□□ 1.06
COL2A1-206ENST00000483376 LY75O60449 1722 aa21.66■■□□□ 1.06
COL2A1-206ENST00000483376 ANP32CO43423 234 aa21.66■■□□□ 1.06
COL2A1-206ENST00000483376 HMGB2P26583 209 aaKnown RBP21.66■■□□□ 1.06
COL2A1-206ENST00000483376 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
COL2A1-206ENST00000483376 PLEKHF1Q96S99 279 aa21.66■■□□□ 1.06
COL2A1-206ENST00000483376 MAP3K5Q99683 1374 aa21.65■■□□□ 1.06
COL2A1-206ENST00000483376 SCN11AQ9UI33 1791 aa21.65■■□□□ 1.06
COL2A1-206ENST00000483376 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
COL2A1-206ENST00000483376 PAPPAQ13219 1627 aa21.63■■□□□ 1.05
COL2A1-206ENST00000483376 GNAT3A8MTJ3 354 aa21.63■■□□□ 1.05
COL2A1-206ENST00000483376 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
COL2A1-206ENST00000483376 NBPF14Q5TI25 921 aa21.63■■□□□ 1.05
COL2A1-206ENST00000483376 HTATSF1O43719 755 aaKnown RBP21.62■■□□□ 1.05
COL2A1-206ENST00000483376 NEFMP07197 916 aa21.62■■□□□ 1.05
COL2A1-206ENST00000483376 CABP4P57796 275 aa21.62■■□□□ 1.05
COL2A1-206ENST00000483376 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
COL2A1-206ENST00000483376 SLC52A2Q9HAB3 445 aa21.61■■□□□ 1.05
COL2A1-206ENST00000483376 LRRC4BQ9NT99 713 aa21.61■■□□□ 1.05
COL2A1-206ENST00000483376 WDR43Q15061 677 aaKnown RBP eCLIP21.59■■□□□ 1.05
COL2A1-206ENST00000483376 LGR6Q9HBX8 967 aa21.59■■□□□ 1.05
COL2A1-206ENST00000483376 ATG3Q9NT62 314 aa21.59■■□□□ 1.05
COL2A1-206ENST00000483376 NFATC2IPQ8NCF5 419 aa21.58■■□□□ 1.05
COL2A1-206ENST00000483376 IL17REQ8NFR9 667 aa21.58■■□□□ 1.05
COL2A1-206ENST00000483376 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.05
COL2A1-206ENST00000483376 ZNF831Q5JPB2 1677 aa21.58■■□□□ 1.05
COL2A1-206ENST00000483376 ANO8Q9HCE9 1232 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms