RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PUS7Q96PZ0 661 aaKnown RBP19.58■□□□□ 0.72
VARS-226ENST00000483275 GGNBP2Q9H3C7 697 aa19.57■□□□□ 0.72
VARS-226ENST00000483275 USP47Q96K76 1375 aa19.57■□□□□ 0.72
VARS-226ENST00000483275 GOLGB1Q14789 3259 aaKnown RBP19.56■□□□□ 0.72
VARS-226ENST00000483275 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
VARS-226ENST00000483275 COL24A1Q17RW2 1714 aa19.55■□□□□ 0.72
VARS-226ENST00000483275 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
VARS-226ENST00000483275 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
VARS-226ENST00000483275 ARXQ96QS3 562 aa19.55■□□□□ 0.72
VARS-226ENST00000483275 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
VARS-226ENST00000483275 PNPLA7Q6ZV29 1317 aa19.53■□□□□ 0.72
VARS-226ENST00000483275 TOGARAM1Q9Y4F4 1720 aa19.53■□□□□ 0.72
VARS-226ENST00000483275 FYB1O15117 783 aa19.52■□□□□ 0.72
VARS-226ENST00000483275 NBPF6Q5VWK0 638 aa19.52■□□□□ 0.72
VARS-226ENST00000483275 ZCRB1Q8TBF4 217 aaKnown RBP19.52■□□□□ 0.72
VARS-226ENST00000483275 NBPF4Q96M43 638 aa19.52■□□□□ 0.72
VARS-226ENST00000483275 C5P01031 1676 aa19.52■□□□□ 0.71
VARS-226ENST00000483275 SLC27A3Q5K4L6 730 aa19.5■□□□□ 0.71
VARS-226ENST00000483275 ITGB4P16144 1822 aa19.49■□□□□ 0.71
VARS-226ENST00000483275 TMF1P82094 1093 aa19.49■□□□□ 0.71
VARS-226ENST00000483275 ZNF784Q8NCA9 323 aaPredicted RBP19.49■□□□□ 0.71
VARS-226ENST00000483275 TFCP2L1Q9NZI6 479 aa19.49■□□□□ 0.71
VARS-226ENST00000483275 SMG6Q86US8 1419 aaKnown RBP19.49■□□□□ 0.71
VARS-226ENST00000483275 TAF1LQ8IZX4 1826 aa19.48■□□□□ 0.71
VARS-226ENST00000483275 HSP90AB2PQ58FF8 381 aa19.48■□□□□ 0.71
VARS-226ENST00000483275 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
VARS-226ENST00000483275 CCNL1Q9UK58 526 aaPredicted RBP19.47■□□□□ 0.71
VARS-226ENST00000483275 PKD1L3Q7Z443 1732 aa19.47■□□□□ 0.71
VARS-226ENST00000483275 ANKRD26Q9UPS8 1709 aa19.46■□□□□ 0.71
VARS-226ENST00000483275 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
VARS-226ENST00000483275 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
VARS-226ENST00000483275 MSH5O43196 834 aa19.45■□□□□ 0.7
VARS-226ENST00000483275 NLGN2Q8NFZ4 835 aa19.45■□□□□ 0.7
VARS-226ENST00000483275 RAPGEF4Q8WZA2 1011 aa19.45■□□□□ 0.7
VARS-226ENST00000483275 INSRP06213 1382 aa19.44■□□□□ 0.7
VARS-226ENST00000483275 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
VARS-226ENST00000483275 CARD14Q9BXL6 1004 aa19.44■□□□□ 0.7
VARS-226ENST00000483275 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
VARS-226ENST00000483275 FLT4P35916 1363 aa19.44■□□□□ 0.7
VARS-226ENST00000483275 TATP17735 454 aaPredicted RBP19.43■□□□□ 0.7
VARS-226ENST00000483275 POLD1P28340 1107 aa19.43■□□□□ 0.7
VARS-226ENST00000483275 GPR162Q16538 588 aa19.43■□□□□ 0.7
VARS-226ENST00000483275 MAP2P11137 1827 aaKnown RBP19.43■□□□□ 0.7
VARS-226ENST00000483275 COL23A1Q86Y22 540 aaPredicted RBP19.41■□□□□ 0.7
VARS-226ENST00000483275 SLC16A10Q8TF71 515 aa19.41■□□□□ 0.7
VARS-226ENST00000483275 PCDH11XQ9BZA7 1347 aa19.41■□□□□ 0.7
VARS-226ENST00000483275 PCDH11YQ9BZA8 1340 aa19.41■□□□□ 0.7
VARS-226ENST00000483275 C4BP0C0L5 1744 aa19.4■□□□□ 0.7
VARS-226ENST00000483275 PPM1GO15355 546 aaPredicted RBP19.4■□□□□ 0.7
VARS-226ENST00000483275 CYP27B1O15528 508 aa19.4■□□□□ 0.7
VARS-226ENST00000483275 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
VARS-226ENST00000483275 PALLDQ8WX93 1383 aa19.4■□□□□ 0.7
VARS-226ENST00000483275 TRIM26Q12899 539 aaPredicted RBP19.39■□□□□ 0.69
VARS-226ENST00000483275 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
VARS-226ENST00000483275 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
VARS-226ENST00000483275 UBR3Q6ZT12 1888 aa19.39■□□□□ 0.69
VARS-226ENST00000483275 SMIM5Q71RC9 77 aa19.38■□□□□ 0.69
VARS-226ENST00000483275 AMIGO3Q86WK7 504 aa19.36■□□□□ 0.69
VARS-226ENST00000483275 YBX3P16989 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
VARS-226ENST00000483275 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
VARS-226ENST00000483275 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
VARS-226ENST00000483275 NCAPD2Q15021 1401 aa19.34■□□□□ 0.69
VARS-226ENST00000483275 KIF24Q5T7B8 1368 aa19.34■□□□□ 0.69
VARS-226ENST00000483275 PHF14O94880 888 aa19.32■□□□□ 0.68
VARS-226ENST00000483275 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
VARS-226ENST00000483275 PIGBQ92521 554 aa19.31■□□□□ 0.68
VARS-226ENST00000483275 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
VARS-226ENST00000483275 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
VARS-226ENST00000483275 AK7Q96M32 723 aa19.29■□□□□ 0.68
VARS-226ENST00000483275 EYA1Q99502 592 aa19.29■□□□□ 0.68
VARS-226ENST00000483275 C1QTNF8P60827 252 aa19.28■□□□□ 0.68
VARS-226ENST00000483275 LINC00116Q8NCU8 138 aa19.27■□□□□ 0.68
VARS-226ENST00000483275 PCGF6Q9BYE7 350 aa19.27■□□□□ 0.68
VARS-226ENST00000483275 WASHC2AQ641Q2 1341 aa19.26■□□□□ 0.67
VARS-226ENST00000483275 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
VARS-226ENST00000483275 ASAP1Q9ULH1 1129 aa19.26■□□□□ 0.67
VARS-226ENST00000483275 SPG7Q9UQ90 795 aa19.26■□□□□ 0.67
VARS-226ENST00000483275 CEP350Q5VT06 3117 aa19.26■□□□□ 0.67
VARS-226ENST00000483275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.25■□□□□ 0.67
VARS-226ENST00000483275 EIF4A2Q14240 407 aaKnown RBP19.25■□□□□ 0.67
VARS-226ENST00000483275 SMARCC1Q92922 1105 aaPredicted RBP19.25■□□□□ 0.67
VARS-226ENST00000483275 LOC102724428A0A0B4J2F2 783 aa19.24■□□□□ 0.67
VARS-226ENST00000483275 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
VARS-226ENST00000483275 SIK1P57059 783 aa19.24■□□□□ 0.67
VARS-226ENST00000483275 ITPK1Q13572 414 aa19.24■□□□□ 0.67
VARS-226ENST00000483275 NKX1-1Q15270 411 aaPredicted RBP19.24■□□□□ 0.67
VARS-226ENST00000483275 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
VARS-226ENST00000483275 PHKG2P15735 406 aa19.23■□□□□ 0.67
VARS-226ENST00000483275 FLAD1Q8NFF5 587 aa19.22■□□□□ 0.67
VARS-226ENST00000483275 COL5A3P25940 1745 aaPredicted RBP19.22■□□□□ 0.67
VARS-226ENST00000483275 GNPATO15228 680 aa19.21■□□□□ 0.67
VARS-226ENST00000483275 ATP10DQ9P241 1426 aa19.21■□□□□ 0.67
VARS-226ENST00000483275 N4BP2Q86UW6 1770 aaPredicted RBP19.2■□□□□ 0.66
VARS-226ENST00000483275 GRIN3BO60391 1043 aa19.2■□□□□ 0.66
VARS-226ENST00000483275 CD2APQ9Y5K6 639 aa19.2■□□□□ 0.66
VARS-226ENST00000483275 IGSF1Q8N6C5 1336 aa19.2■□□□□ 0.66
VARS-226ENST00000483275 KIAA1551Q9HCM1 1747 aa19.2■□□□□ 0.66
VARS-226ENST00000483275 ATP6V1AP38606 617 aa19.19■□□□□ 0.66
VARS-226ENST00000483275 IFNL2Q8IZJ0 200 aa19.19■□□□□ 0.66
VARS-226ENST00000483275 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms