RNA–Protein interactions for RNA: ENST00000483145.1

CCDC57-209, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-209ENST00000483145 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
CCDC57-209ENST00000483145 THRAP3Q9Y2W1 955 aaKnown RBP13.97□□□□□ -0.17
CCDC57-209ENST00000483145 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.17
CCDC57-209ENST00000483145 FAM196AQ6ZSG2 479 aa13.96□□□□□ -0.17
CCDC57-209ENST00000483145 PARP4Q9UKK3 1724 aaKnown RBP13.95□□□□□ -0.18
CCDC57-209ENST00000483145 FCHSD2O94868 740 aa13.95□□□□□ -0.18
CCDC57-209ENST00000483145 SULT6B1Q6IMI4 303 aa13.95□□□□□ -0.18
CCDC57-209ENST00000483145 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
CCDC57-209ENST00000483145 ADAMTS8Q9UP79 889 aa13.95□□□□□ -0.18
CCDC57-209ENST00000483145 AEBP1Q8IUX7 1158 aa13.94□□□□□ -0.18
CCDC57-209ENST00000483145 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
CCDC57-209ENST00000483145 TRIM37O94972 964 aa13.93□□□□□ -0.18
CCDC57-209ENST00000483145 HMOX1P09601 288 aa13.93□□□□□ -0.18
CCDC57-209ENST00000483145 EN1Q05925 392 aaPredicted RBP13.93□□□□□ -0.18
CCDC57-209ENST00000483145 FAM9BQ8IZU0 186 aa13.93□□□□□ -0.18
CCDC57-209ENST00000483145 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
CCDC57-209ENST00000483145 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
CCDC57-209ENST00000483145 DISP2A7MBM2 1401 aa13.92□□□□□ -0.18
CCDC57-209ENST00000483145 MEGF6O75095 1541 aa13.92□□□□□ -0.18
CCDC57-209ENST00000483145 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
CCDC57-209ENST00000483145 OVOS2A0A0G2JMS6 1433 aa13.91□□□□□ -0.18
CCDC57-209ENST00000483145 PLEKHF1Q96S99 279 aa13.91□□□□□ -0.18
CCDC57-209ENST00000483145 RAPGEF4Q8WZA2 1011 aa13.9□□□□□ -0.18
CCDC57-209ENST00000483145 RUNDC1Q96C34 613 aa13.9□□□□□ -0.18
CCDC57-209ENST00000483145 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
CCDC57-209ENST00000483145 APBA3O96018 575 aa13.89□□□□□ -0.19
CCDC57-209ENST00000483145 IL2RBP14784 551 aa13.89□□□□□ -0.19
CCDC57-209ENST00000483145 DDB1Q16531 1140 aa13.89□□□□□ -0.19
CCDC57-209ENST00000483145 TNS1Q9HBL0 1735 aaKnown RBP13.89□□□□□ -0.19
CCDC57-209ENST00000483145 MAPK8IP3Q9UPT6 1336 aa13.89□□□□□ -0.19
CCDC57-209ENST00000483145 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
CCDC57-209ENST00000483145 SHANK3Q9BYB0 1731 aa13.88□□□□□ -0.19
CCDC57-209ENST00000483145 NEFMP07197 916 aa13.88□□□□□ -0.19
CCDC57-209ENST00000483145 TATP17735 454 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-209ENST00000483145 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
CCDC57-209ENST00000483145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC57-209ENST00000483145 LRRC37A3O60309 1634 aa13.88□□□□□ -0.19
CCDC57-209ENST00000483145 EZH2Q15910 746 aaKnown RBP13.87□□□□□ -0.19
CCDC57-209ENST00000483145 DLG5Q8TDM6 1919 aa13.87□□□□□ -0.19
CCDC57-209ENST00000483145 TNS2Q63HR2 1409 aa13.87□□□□□ -0.19
CCDC57-209ENST00000483145 PSDA5PKW4 1024 aaPredicted RBP13.86□□□□□ -0.19
CCDC57-209ENST00000483145 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
CCDC57-209ENST00000483145 PHACTR3Q96KR7 559 aa13.86□□□□□ -0.19
CCDC57-209ENST00000483145 PLEKHO1Q53GL0 409 aaPredicted RBP13.85□□□□□ -0.19
CCDC57-209ENST00000483145 GAS2L2Q8NHY3 880 aa13.85□□□□□ -0.19
CCDC57-209ENST00000483145 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
CCDC57-209ENST00000483145 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
CCDC57-209ENST00000483145 NGEFQ8N5V2 710 aa13.84□□□□□ -0.19
CCDC57-209ENST00000483145 CAMKK2Q96RR4 588 aa13.84□□□□□ -0.19
CCDC57-209ENST00000483145 SPG7Q9UQ90 795 aa13.84□□□□□ -0.19
CCDC57-209ENST00000483145 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
CCDC57-209ENST00000483145 EXOC5O00471 708 aa13.83□□□□□ -0.2
CCDC57-209ENST00000483145 APAF1O14727 1248 aa13.83□□□□□ -0.2
CCDC57-209ENST00000483145 TMPOP42166 694 aaKnown RBP13.83□□□□□ -0.2
CCDC57-209ENST00000483145 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
CCDC57-209ENST00000483145 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
CCDC57-209ENST00000483145 ZCRB1Q8TBF4 217 aaKnown RBP13.83□□□□□ -0.2
CCDC57-209ENST00000483145 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
CCDC57-209ENST00000483145 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
CCDC57-209ENST00000483145 NBPF14Q5TI25 921 aa13.82□□□□□ -0.2
CCDC57-209ENST00000483145 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
CCDC57-209ENST00000483145 MAP3K5Q99683 1374 aa13.82□□□□□ -0.2
CCDC57-209ENST00000483145 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
CCDC57-209ENST00000483145 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
CCDC57-209ENST00000483145 CYP27B1O15528 508 aa13.8□□□□□ -0.2
CCDC57-209ENST00000483145 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
CCDC57-209ENST00000483145 C1orf141Q5JVX7 400 aa13.8□□□□□ -0.2
CCDC57-209ENST00000483145 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
CCDC57-209ENST00000483145 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
CCDC57-209ENST00000483145 PHKG2P15735 406 aa13.79□□□□□ -0.2
CCDC57-209ENST00000483145 RIPK4P57078 832 aa13.79□□□□□ -0.2
CCDC57-209ENST00000483145 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC57-209ENST00000483145 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
CCDC57-209ENST00000483145 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
CCDC57-209ENST00000483145 MARCH10Q8NA82 808 aaPredicted RBP13.79□□□□□ -0.2
CCDC57-209ENST00000483145 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
CCDC57-209ENST00000483145 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
CCDC57-209ENST00000483145 HSP90AB1P08238 724 aaKnown RBP13.78□□□□□ -0.2
CCDC57-209ENST00000483145 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
CCDC57-209ENST00000483145 LRP5O75197 1615 aa13.78□□□□□ -0.2
CCDC57-209ENST00000483145 RREB1Q92766 1687 aa13.78□□□□□ -0.2
CCDC57-209ENST00000483145 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
CCDC57-209ENST00000483145 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CCDC57-209ENST00000483145 KDM6AO15550 1401 aaPredicted RBP13.77□□□□□ -0.21
CCDC57-209ENST00000483145 MRC1P22897 1456 aa13.77□□□□□ -0.21
CCDC57-209ENST00000483145 NKX1-1Q15270 411 aaPredicted RBP13.77□□□□□ -0.21
CCDC57-209ENST00000483145 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
CCDC57-209ENST00000483145 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.21
CCDC57-209ENST00000483145 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
CCDC57-209ENST00000483145 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
CCDC57-209ENST00000483145 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
CCDC57-209ENST00000483145 BCL9O00512 1426 aa13.76□□□□□ -0.21
CCDC57-209ENST00000483145 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
CCDC57-209ENST00000483145 ZNF521Q96K83 1311 aa13.76□□□□□ -0.21
CCDC57-209ENST00000483145 PLSCR1O15162 318 aa13.76□□□□□ -0.21
CCDC57-209ENST00000483145 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
CCDC57-209ENST00000483145 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
CCDC57-209ENST00000483145 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
CCDC57-209ENST00000483145 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
CCDC57-209ENST00000483145 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms