RNA–Protein interactions for RNA: ENST00000483136.1

CACNA1C-226, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-226ENST00000483136 SAFB2Q14151 953 aaKnown RBP eCLIP8.69□□□□□ -1.02
CACNA1C-226ENST00000483136 DPY19L2Q6NUT2 758 aa8.69□□□□□ -1.02
CACNA1C-226ENST00000483136 ROCK1Q13464 1354 aa8.69□□□□□ -1.02
CACNA1C-226ENST00000483136 FAM50AQ14320 339 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-226ENST00000483136 CHADLQ6NUI6 762 aa8.68□□□□□ -1.02
CACNA1C-226ENST00000483136 ADGRF5Q8IZF2 1346 aa8.68□□□□□ -1.02
CACNA1C-226ENST00000483136 VPS8Q8N3P4 1428 aa8.68□□□□□ -1.02
CACNA1C-226ENST00000483136 ZBTB7CA1YPR0 619 aa8.67□□□□□ -1.02
CACNA1C-226ENST00000483136 TMEM88BA6NKF7 163 aa8.67□□□□□ -1.02
CACNA1C-226ENST00000483136 CA12O43570 354 aa8.67□□□□□ -1.02
CACNA1C-226ENST00000483136 NPM3O75607 178 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-226ENST00000483136 PITPNM2Q9BZ72 1349 aa8.67□□□□□ -1.02
CACNA1C-226ENST00000483136 NSD3Q9BZ95 1437 aa8.67□□□□□ -1.02
CACNA1C-226ENST00000483136 C14orf93Q9H972 538 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-226ENST00000483136 BTAF1O14981 1849 aa8.66□□□□□ -1.02
CACNA1C-226ENST00000483136 POLR3AO14802 1390 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-226ENST00000483136 DEFB115Q30KQ5 88 aa8.66□□□□□ -1.02
CACNA1C-226ENST00000483136 HABP4Q5JVS0 413 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-226ENST00000483136 MCOLN1Q9GZU1 580 aa8.66□□□□□ -1.02
CACNA1C-226ENST00000483136 PIM2Q9P1W9 311 aa8.66□□□□□ -1.02
CACNA1C-226ENST00000483136 PPLO60437 1756 aa8.66□□□□□ -1.02
CACNA1C-226ENST00000483136 PRR36Q9H6K5 1346 aa8.65□□□□□ -1.02
CACNA1C-226ENST00000483136 IL2RBP14784 551 aa8.65□□□□□ -1.02
CACNA1C-226ENST00000483136 NUDT16Q96DE0 195 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-226ENST00000483136 KCNH5Q8NCM2 988 aa8.64□□□□□ -1.03
CACNA1C-226ENST00000483136 SLC17A8Q8NDX2 589 aa8.64□□□□□ -1.03
CACNA1C-226ENST00000483136 CCDC61Q9Y6R9 512 aa8.64□□□□□ -1.03
CACNA1C-226ENST00000483136 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 COL18A1P39060 1754 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 ACEP12821 1306 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 A0A0G2JLW4 131 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 PLEKHG3A1L390 1219 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 RASSF10A6NK89 507 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 ECE1P42892 770 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 DALRD3Q5D0E6 543 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 ABCC6O95255 1503 aa8.63□□□□□ -1.03
CACNA1C-226ENST00000483136 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 USP47Q96K76 1375 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 MINK1Q8N4C8 1332 aaPredicted RBP8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 WDR33Q9C0J8 1336 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 KCNQ4P56696 695 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 NLRP6P59044 892 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 DGKZQ13574 1117 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 CNKSR2Q8WXI2 1034 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 AK7Q96M32 723 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
CACNA1C-226ENST00000483136 TNRC18O15417 2968 aaPredicted RBP8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 LMNB1P20700 586 aa8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 SSFA2P28290 1259 aa8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 PIK3C2GO75747 1445 aa8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 WNK3Q9BYP7 1800 aa8.61□□□□□ -1.03
CACNA1C-226ENST00000483136 PASKQ96RG2 1323 aa8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 DPEP1P16444 411 aa8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 RGL3Q3MIN7 710 aa8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 ZNF219Q9P2Y4 722 aaPredicted RBP8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 CUL9Q8IWT3 2517 aa8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 SPATA31E1Q6ZUB1 1445 aa8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 PKD1L3Q7Z443 1732 aa8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 ANKRD36BQ8N2N9 1353 aa8.6□□□□□ -1.03
CACNA1C-226ENST00000483136 MAP2K2P36507 400 aa8.59□□□□□ -1.03
CACNA1C-226ENST00000483136 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
CACNA1C-226ENST00000483136 ITSN1Q15811 1721 aa8.59□□□□□ -1.03
CACNA1C-226ENST00000483136 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
CACNA1C-226ENST00000483136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-226ENST00000483136 IQCA1LA6NCM1 817 aa8.58□□□□□ -1.04
CACNA1C-226ENST00000483136 MMP10P09238 476 aa8.58□□□□□ -1.04
CACNA1C-226ENST00000483136 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
CACNA1C-226ENST00000483136 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
CACNA1C-226ENST00000483136 NLRP2Q9NX02 1062 aa8.58□□□□□ -1.04
CACNA1C-226ENST00000483136 GPR101Q96P66 508 aaPredicted RBP8.57□□□□□ -1.04
CACNA1C-226ENST00000483136 LY75O60449 1722 aa8.57□□□□□ -1.04
CACNA1C-226ENST00000483136 POTECB2RU33 542 aa8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 MNX1P50219 401 aaPredicted RBP8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 FXR1P51114 621 aaKnown RBP eCLIP8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 SOX10P56693 466 aa8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 SMARCC1Q92922 1105 aaPredicted RBP8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 ARFGEF1Q9Y6D6 1849 aa8.56□□□□□ -1.04
CACNA1C-226ENST00000483136 TMF1P82094 1093 aa8.55□□□□□ -1.04
CACNA1C-226ENST00000483136 MAPK8IP2Q13387 824 aaPredicted RBP8.55□□□□□ -1.04
CACNA1C-226ENST00000483136 ABT1Q9ULW3 272 aaKnown RBP8.55□□□□□ -1.04
CACNA1C-226ENST00000483136 TRAK1Q9UPV9 953 aa8.55□□□□□ -1.04
CACNA1C-226ENST00000483136 CPSF1Q10570 1443 aaKnown RBP8.54□□□□□ -1.04
CACNA1C-226ENST00000483136 KIF13BQ9NQT8 1826 aa8.54□□□□□ -1.04
CACNA1C-226ENST00000483136 PHF14O94880 888 aa8.54□□□□□ -1.04
CACNA1C-226ENST00000483136 ITGBL1O95965 494 aaPredicted RBP8.54□□□□□ -1.04
CACNA1C-226ENST00000483136 KCNA3P22001 575 aa8.54□□□□□ -1.04
CACNA1C-226ENST00000483136 CDK19Q9BWU1 502 aa8.54□□□□□ -1.04
CACNA1C-226ENST00000483136 KDM6AO15550 1401 aaPredicted RBP8.54□□□□□ -1.04
CACNA1C-226ENST00000483136 SBF1O95248 1867 aa8.53□□□□□ -1.04
CACNA1C-226ENST00000483136 CAPNS2Q96L46 248 aa8.53□□□□□ -1.04
CACNA1C-226ENST00000483136 PNMA8AQ86V59 439 aaPredicted RBP8.52□□□□□ -1.05
CACNA1C-226ENST00000483136 N4BP2Q86UW6 1770 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms