RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 AMPHP49418 695 aa10.44□□□□□ -0.74
CSDE1-206ENST00000483030 ZCRB1Q8TBF4 217 aaKnown RBP10.44□□□□□ -0.74
CSDE1-206ENST00000483030 COG3Q96JB2 828 aa10.44□□□□□ -0.74
CSDE1-206ENST00000483030 PUS7Q96PZ0 661 aaKnown RBP10.44□□□□□ -0.74
CSDE1-206ENST00000483030 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
CSDE1-206ENST00000483030 MAP3K19Q56UN5 1328 aa10.43□□□□□ -0.74
CSDE1-206ENST00000483030 HOXC9P31274 260 aa10.43□□□□□ -0.74
CSDE1-206ENST00000483030 NLGN2Q8NFZ4 835 aa10.43□□□□□ -0.74
CSDE1-206ENST00000483030 UTRNP46939 3433 aa10.43□□□□□ -0.74
CSDE1-206ENST00000483030 ANKRD36BQ8N2N9 1353 aa10.42□□□□□ -0.74
CSDE1-206ENST00000483030 NPM3O75607 178 aaKnown RBP10.42□□□□□ -0.74
CSDE1-206ENST00000483030 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-206ENST00000483030 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
CSDE1-206ENST00000483030 PAPPAQ13219 1627 aa10.42□□□□□ -0.74
CSDE1-206ENST00000483030 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
CSDE1-206ENST00000483030 MON2Q7Z3U7 1717 aa10.41□□□□□ -0.74
CSDE1-206ENST00000483030 ST20-MTHFSA0A0A6YYL1 179 aa10.4□□□□□ -0.74
CSDE1-206ENST00000483030 GIGYF1O75420 1035 aaPredicted RBP10.4□□□□□ -0.74
CSDE1-206ENST00000483030 RRS1Q15050 365 aaKnown RBP10.4□□□□□ -0.74
CSDE1-206ENST00000483030 NBPF6Q5VWK0 638 aa10.4□□□□□ -0.74
CSDE1-206ENST00000483030 NBPF4Q96M43 638 aa10.4□□□□□ -0.74
CSDE1-206ENST00000483030 TESK2Q96S53 571 aa10.4□□□□□ -0.74
CSDE1-206ENST00000483030 BTAF1O14981 1849 aa10.4□□□□□ -0.75
CSDE1-206ENST00000483030 NSD2O96028 1365 aa10.39□□□□□ -0.75
CSDE1-206ENST00000483030 YBX3P16989 372 aaKnown RBP eCLIP10.39□□□□□ -0.752e-12■■■□□ 16.7
CSDE1-206ENST00000483030 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
CSDE1-206ENST00000483030 USHBP1Q8N6Y0 703 aa10.39□□□□□ -0.75
CSDE1-206ENST00000483030 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
CSDE1-206ENST00000483030 USP47Q96K76 1375 aa10.39□□□□□ -0.75
CSDE1-206ENST00000483030 ZBTB22O15209 634 aa10.38□□□□□ -0.75
CSDE1-206ENST00000483030 GRIN3BO60391 1043 aa10.38□□□□□ -0.75
CSDE1-206ENST00000483030 RAPGEF4Q8WZA2 1011 aa10.38□□□□□ -0.75
CSDE1-206ENST00000483030 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
CSDE1-206ENST00000483030 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
CSDE1-206ENST00000483030 KAT6BQ8WYB5 2073 aa10.38□□□□□ -0.75
CSDE1-206ENST00000483030 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
CSDE1-206ENST00000483030 LTN1O94822 1766 aa10.37□□□□□ -0.75
CSDE1-206ENST00000483030 FYB1O15117 783 aa10.37□□□□□ -0.75
CSDE1-206ENST00000483030 MEGF6O75095 1541 aa10.37□□□□□ -0.75
CSDE1-206ENST00000483030 CGNL1Q0VF96 1302 aa10.36□□□□□ -0.75
CSDE1-206ENST00000483030 TATP17735 454 aaPredicted RBP10.36□□□□□ -0.75
CSDE1-206ENST00000483030 HSP90AB2PQ58FF8 381 aa10.36□□□□□ -0.75
CSDE1-206ENST00000483030 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
CSDE1-206ENST00000483030 HMGB2P26583 209 aaKnown RBP10.34□□□□□ -0.75
CSDE1-206ENST00000483030 FLAD1Q8NFF5 587 aa10.34□□□□□ -0.75
CSDE1-206ENST00000483030 CD2APQ9Y5K6 639 aa10.34□□□□□ -0.75
CSDE1-206ENST00000483030 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
CSDE1-206ENST00000483030 CHD4Q14839 1912 aa10.33□□□□□ -0.76
CSDE1-206ENST00000483030 CYP27B1O15528 508 aa10.33□□□□□ -0.76
CSDE1-206ENST00000483030 TMF1P82094 1093 aa10.33□□□□□ -0.76
CSDE1-206ENST00000483030 SMIM5Q71RC9 77 aa10.33□□□□□ -0.76
CSDE1-206ENST00000483030 PALLDQ8WX93 1383 aa10.33□□□□□ -0.76
CSDE1-206ENST00000483030 SMG6Q86US8 1419 aaKnown RBP10.33□□□□□ -0.76
CSDE1-206ENST00000483030 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
CSDE1-206ENST00000483030 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
CSDE1-206ENST00000483030 INSRP06213 1382 aa10.32□□□□□ -0.76
CSDE1-206ENST00000483030 AMIGO3Q86WK7 504 aa10.32□□□□□ -0.76
CSDE1-206ENST00000483030 SMARCC1Q92922 1105 aaPredicted RBP10.32□□□□□ -0.76
CSDE1-206ENST00000483030 AK7Q96M32 723 aa10.32□□□□□ -0.76
CSDE1-206ENST00000483030 FAM208AQ9UK61 1670 aaKnown RBP10.31□□□□□ -0.76
CSDE1-206ENST00000483030 PHF14O94880 888 aa10.31□□□□□ -0.76
CSDE1-206ENST00000483030 ZNF526Q8TF50 670 aaPredicted RBP10.31□□□□□ -0.76
CSDE1-206ENST00000483030 PIGBQ92521 554 aa10.31□□□□□ -0.76
CSDE1-206ENST00000483030 GPBP1L1Q9HC44 474 aaPredicted RBP10.31□□□□□ -0.76
CSDE1-206ENST00000483030 WWC3Q9ULE0 1092 aa10.31□□□□□ -0.76
CSDE1-206ENST00000483030 ATP10DQ9P241 1426 aa10.31□□□□□ -0.76
CSDE1-206ENST00000483030 DOT1LQ8TEK3 1739 aa10.3□□□□□ -0.76
CSDE1-206ENST00000483030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
CSDE1-206ENST00000483030 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-206ENST00000483030 CARD14Q9BXL6 1004 aa10.3□□□□□ -0.76
CSDE1-206ENST00000483030 EMILIN1Q9Y6C2 1016 aa10.3□□□□□ -0.76
CSDE1-206ENST00000483030 COL24A1Q17RW2 1714 aa10.3□□□□□ -0.76
CSDE1-206ENST00000483030 QSER1Q2KHR3 1735 aa10.3□□□□□ -0.76
CSDE1-206ENST00000483030 GOLGB1Q14789 3259 aaKnown RBP10.29□□□□□ -0.76
CSDE1-206ENST00000483030 FLT4P35916 1363 aa10.29□□□□□ -0.76
CSDE1-206ENST00000483030 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
CSDE1-206ENST00000483030 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
CSDE1-206ENST00000483030 LY75O60449 1722 aa10.29□□□□□ -0.76
CSDE1-206ENST00000483030 SHANK3Q9BYB0 1731 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 LOC102724428A0A0B4J2F2 783 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 SIK1P57059 783 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 CDCA8Q53HL2 280 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 LINC00116Q8NCU8 138 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 SPG7Q9UQ90 795 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 IGSF1Q8N6C5 1336 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 TUBGCP6Q96RT7 1819 aa10.28□□□□□ -0.76
CSDE1-206ENST00000483030 KIF24Q5T7B8 1368 aa10.27□□□□□ -0.76
CSDE1-206ENST00000483030 RGPD2P0DJD1 1756 aa10.27□□□□□ -0.77
CSDE1-206ENST00000483030 SSFA2P28290 1259 aa10.27□□□□□ -0.77
CSDE1-206ENST00000483030 TMOD3Q9NYL9 352 aa10.27□□□□□ -0.77
CSDE1-206ENST00000483030 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
CSDE1-206ENST00000483030 GNPATO15228 680 aa10.26□□□□□ -0.77
CSDE1-206ENST00000483030 HSPA6P17066 643 aa10.26□□□□□ -0.77
CSDE1-206ENST00000483030 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
CSDE1-206ENST00000483030 ITPK1Q13572 414 aa10.26□□□□□ -0.77
CSDE1-206ENST00000483030 EYA1Q99502 592 aa10.26□□□□□ -0.77
CSDE1-206ENST00000483030 IFNL2Q8IZJ0 200 aa10.25□□□□□ -0.77
CSDE1-206ENST00000483030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.774e-11■■□□□ 12
CSDE1-206ENST00000483030 WASHC2AQ641Q2 1341 aa10.25□□□□□ -0.77
CSDE1-206ENST00000483030 ADCY9O60503 1353 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms