RNA–Protein interactions for RNA: ENST00000482935.5

DNMT3A-212, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-212ENST00000482935 IGSF1Q8N6C5 1336 aa11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 DDX10Q13206 875 aaKnown RBP11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 ACSBG1Q96GR2 724 aa11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 SPG7Q9UQ90 795 aa11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 TNS1Q9HBL0 1735 aaKnown RBP11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
DNMT3A-212ENST00000482935 DIAPH1O60610 1272 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-212ENST00000482935 IL13P35225 146 aa11.17□□□□□ -0.62
DNMT3A-212ENST00000482935 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
DNMT3A-212ENST00000482935 PARD3Q8TEW0 1356 aa11.16□□□□□ -0.62
DNMT3A-212ENST00000482935 KCNQ2O43526 872 aa11.16□□□□□ -0.62
DNMT3A-212ENST00000482935 EZH2Q15910 746 aaKnown RBP11.16□□□□□ -0.62
DNMT3A-212ENST00000482935 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
DNMT3A-212ENST00000482935 SYTL4Q96C24 671 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-212ENST00000482935 CAMKK2Q96RR4 588 aa11.16□□□□□ -0.62
DNMT3A-212ENST00000482935 PPP2R1AP30153 589 aa11.15□□□□□ -0.62
DNMT3A-212ENST00000482935 SULT6B1Q6IMI4 303 aa11.15□□□□□ -0.62
DNMT3A-212ENST00000482935 AEBP1Q8IUX7 1158 aa11.15□□□□□ -0.62
DNMT3A-212ENST00000482935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
DNMT3A-212ENST00000482935 SBF2Q86WG5 1849 aa11.14□□□□□ -0.63
DNMT3A-212ENST00000482935 PLEKHO1Q53GL0 409 aaPredicted RBP11.14□□□□□ -0.63
DNMT3A-212ENST00000482935 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
DNMT3A-212ENST00000482935 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 U2SURPO15042 1029 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 PLSCR1O15162 318 aa11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 CYP27B1O15528 508 aa11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 AMOTQ4VCS5 1084 aa11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 IFNL2Q8IZJ0 200 aa11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 MIER1Q8N108 512 aa11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 NHSQ6T4R5 1651 aa11.13□□□□□ -0.63
DNMT3A-212ENST00000482935 PKD1L3Q7Z443 1732 aa11.12□□□□□ -0.63
DNMT3A-212ENST00000482935 CENPBP07199 599 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-212ENST00000482935 HMOX1P09601 288 aa11.12□□□□□ -0.63
DNMT3A-212ENST00000482935 NUDCQ9Y266 331 aa11.12□□□□□ -0.63
DNMT3A-212ENST00000482935 KDRP35968 1356 aa11.12□□□□□ -0.63
DNMT3A-212ENST00000482935 PHKG2P15735 406 aa11.11□□□□□ -0.63
DNMT3A-212ENST00000482935 RALBP1Q15311 655 aa11.11□□□□□ -0.63
DNMT3A-212ENST00000482935 NBPF14Q5TI25 921 aa11.11□□□□□ -0.63
DNMT3A-212ENST00000482935 ZNF530Q6P9A1 599 aaPredicted RBP11.11□□□□□ -0.63
DNMT3A-212ENST00000482935 KAT6BQ8WYB5 2073 aa11.11□□□□□ -0.63
DNMT3A-212ENST00000482935 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
DNMT3A-212ENST00000482935 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
DNMT3A-212ENST00000482935 HSP90AB1P08238 724 aaKnown RBP11.1□□□□□ -0.63
DNMT3A-212ENST00000482935 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
DNMT3A-212ENST00000482935 TXNRD1Q16881 649 aa11.1□□□□□ -0.63
DNMT3A-212ENST00000482935 C1orf141Q5JVX7 400 aa11.1□□□□□ -0.63
DNMT3A-212ENST00000482935 RGPD3A6NKT7 1758 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-212ENST00000482935 RGPD4Q7Z3J3 1758 aa11.09□□□□□ -0.63
DNMT3A-212ENST00000482935 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
DNMT3A-212ENST00000482935 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
DNMT3A-212ENST00000482935 RREB1Q92766 1687 aa11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 BTAF1O14981 1849 aa11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 R3HDM1Q15032 1099 aaKnown RBP11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 PROM2Q8N271 834 aa11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 DCAF5Q96JK2 942 aa11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
DNMT3A-212ENST00000482935 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
DNMT3A-212ENST00000482935 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
DNMT3A-212ENST00000482935 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
DNMT3A-212ENST00000482935 STK32BQ9NY57 414 aa11.06□□□□□ -0.64
DNMT3A-212ENST00000482935 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-212ENST00000482935 ERVV-2B6SEH9 535 aa11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 PRKAR2BP31323 418 aa11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 CABP4P57796 275 aa11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 MTHFSDQ2M296 383 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 PIGBQ92521 554 aa11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 SMARCC1Q92922 1105 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 CCNL1Q9UK58 526 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
DNMT3A-212ENST00000482935 PALLDQ8WX93 1383 aa11.04□□□□□ -0.64
DNMT3A-212ENST00000482935 KDM6AO15550 1401 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-212ENST00000482935 FCHSD2O94868 740 aa11.04□□□□□ -0.64
DNMT3A-212ENST00000482935 GAS2L2Q8NHY3 880 aa11.04□□□□□ -0.64
DNMT3A-212ENST00000482935 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
DNMT3A-212ENST00000482935 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-212ENST00000482935 SRCAPQ6ZRS2 3230 aa11.03□□□□□ -0.64
DNMT3A-212ENST00000482935 NEFMP07197 916 aa11.03□□□□□ -0.64
DNMT3A-212ENST00000482935 HMGB2P26583 209 aaKnown RBP11.03□□□□□ -0.64
DNMT3A-212ENST00000482935 KCNQ4P56696 695 aa11.03□□□□□ -0.64
DNMT3A-212ENST00000482935 PRKRIP1Q9H875 184 aaPredicted RBP11.03□□□□□ -0.64
DNMT3A-212ENST00000482935 LRRC4BQ9NT99 713 aa11.03□□□□□ -0.64
DNMT3A-212ENST00000482935 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
DNMT3A-212ENST00000482935 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.65
DNMT3A-212ENST00000482935 ITGB4P16144 1822 aa11.02□□□□□ -0.65
DNMT3A-212ENST00000482935 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 MAP3K5Q99683 1374 aa11.01□□□□□ -0.65
DNMT3A-212ENST00000482935 ZNF827Q17R98 1081 aa11□□□□□ -0.65
DNMT3A-212ENST00000482935 SLC52A2Q9HAB3 445 aa11□□□□□ -0.65
DNMT3A-212ENST00000482935 TFCP2L1Q9NZI6 479 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms